; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G006900 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G006900
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRING-type domain-containing protein
Genome locationCmo_Chr01:3529787..3532102
RNA-Seq ExpressionCmoCh01G006900
SyntenyCmoCh01G006900
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005829 - cytosol (cellular component)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607303.1 E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sororia]1.1e-13598.77Show/hide
Query:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP
        MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFY VIFP
Subjt:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP

Query:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT
        SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHC HSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT
Subjt:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT

Query:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR
        DRNETIDLTSILQEN+KRLFMYINKLPLVVPDPVFLPLDSHIR
Subjt:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR

XP_022948775.1 uncharacterized protein LOC111452344 [Cucurbita moschata]2.0e-137100Show/hide
Query:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP
        MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP
Subjt:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP

Query:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT
        SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT
Subjt:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT

Query:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR
        DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR
Subjt:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR

XP_022965010.1 E3 ubiquitin-protein ligase rnf8-B-like [Cucurbita moschata]1.3e-12388.89Show/hide
Query:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP
        MGKLSFKDSLKALEADVQ+ANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDC LAGALGLLRI +YVTYPDGKTTM+IYERK+SIREFYVVIFP
Subjt:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP

Query:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT
        SLLQLQ+GITELEDRKQKEVCN+RYKRRDE+ RGKLSEID EREKECGICME+N++VVLP+C HSLCL CYRDWR+RSQSCPFCRDSLKRVNSGDLWI+T
Subjt:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT

Query:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR
        D++E IDLTSILQ+N+KRLF YI KLPLVVPDPVFLPLDSHIR
Subjt:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR

XP_022998735.1 uncharacterized protein LOC111493310 isoform X1 [Cucurbita maxima]4.6e-13497.12Show/hide
Query:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP
        MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDC LAGALGLLRIH+YVTYPDGKTTMSIYERKSSIREFYVVIFP
Subjt:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP

Query:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT
        SLLQLQKGITELEDRKQKEVCN+RYKRRDE  RGKLSEIDKEREKECGICMEVNSIVVLPHC HSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT
Subjt:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT

Query:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR
        DRNETIDLTSILQEN+KRLFMYINKLPLVVPDPVFLPLDSHIR
Subjt:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR

XP_023525243.1 uncharacterized protein LOC111788903 [Cucurbita pepo subsp. pepo]3.5e-13497.12Show/hide
Query:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP
        MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIH++VTYPDGKTTMSIYERKSSIREFYVVIFP
Subjt:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP

Query:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT
        SLLQLQKGITELEDRKQKEVCN+RYKRRDE  RGKLSEIDKEREKECGICMEVNSIVVLPHC HSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT
Subjt:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT

Query:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR
        DRNETIDLTSILQEN+KRLFMYINKLPLVVPDPVFLPLDSHIR
Subjt:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR

TrEMBL top hitse value%identityAlignment
A0A0A0LY84 RING-type domain-containing protein5.2e-12388.89Show/hide
Query:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP
        MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDC LAGALGLLRI +YVTYPDGKTTMSIYERK+SIREFYVVIFP
Subjt:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP

Query:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT
        SLLQLQKGITELEDRKQKEVCN+RY RRDE  RGKLSEID EREKECGICME N +VVLP+C HSLCLKCYRDWR RSQSCPFCRDSLKRVNSGDLWI+T
Subjt:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT

Query:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR
        D++E IDL SIL +N+KRLF YI+KLPLVVPDPVFLP+DSHIR
Subjt:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR

A0A6J1GAV0 uncharacterized protein LOC1114523449.7e-138100Show/hide
Query:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP
        MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP
Subjt:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP

Query:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT
        SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT
Subjt:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT

Query:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR
        DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR
Subjt:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR

A0A6J1HMH6 E3 ubiquitin-protein ligase rnf8-B-like6.1e-12488.89Show/hide
Query:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP
        MGKLSFKDSLKALEADVQ+ANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDC LAGALGLLRI +YVTYPDGKTTM+IYERK+SIREFYVVIFP
Subjt:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP

Query:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT
        SLLQLQ+GITELEDRKQKEVCN+RYKRRDE+ RGKLSEID EREKECGICME+N++VVLP+C HSLCL CYRDWR+RSQSCPFCRDSLKRVNSGDLWI+T
Subjt:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT

Query:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR
        D++E IDLTSILQ+N+KRLF YI KLPLVVPDPVFLPLDSHIR
Subjt:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR

A0A6J1I3Y6 E3 ubiquitin-protein ligase rnf8-A-like2.3e-12388.48Show/hide
Query:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP
        MGKLSFKDSLKALEADVQ+ANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDC LAGALGLLRI +YVTYPDGKTTM+IYERK+SIREFYVVIFP
Subjt:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP

Query:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT
        SLLQLQ+GITELEDRKQKEVCN+RYKRRDE  RGKLSEID EREKECGICME+N++VVLP+C HSLCL CYRDWR+RSQSCPFCRDSLKRVNSGDLWI+T
Subjt:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT

Query:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR
        D++E +DLTSILQ+N+KRLF YI KLPLVVPDPVFLPLDSHIR
Subjt:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR

A0A6J1KDB1 uncharacterized protein LOC111493310 isoform X12.2e-13497.12Show/hide
Query:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP
        MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDC LAGALGLLRIH+YVTYPDGKTTMSIYERKSSIREFYVVIFP
Subjt:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP

Query:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT
        SLLQLQKGITELEDRKQKEVCN+RYKRRDE  RGKLSEIDKEREKECGICMEVNSIVVLPHC HSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT
Subjt:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT

Query:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR
        DRNETIDLTSILQEN+KRLFMYINKLPLVVPDPVFLPLDSHIR
Subjt:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFLPLDSHIR

SwissProt top hitse value%identityAlignment
Q60764 Probable E3 ubiquitin-protein ligase makorin-35.5e-0535.53Show/hide
Query:  IDKEREKECGICMEV---------NSIVVLPHCIHSLCLKCYRDWRSRSQ-------SCPFCRDSLKRVNSGDLWI
        + +  +K CGICMEV             +L  C H+ CL+C R WRS +Q       SCP CR S   V   + W+
Subjt:  IDKEREKECGICMEV---------NSIVVLPHCIHSLCLKCYRDWRSRSQ-------SCPFCRDSLKRVNSGDLWI

Q8IYW5 E3 ubiquitin-protein ligase RNF1686.1e-0437.18Show/hide
Query:  EKECGICMEVNSIVVLPHCIHSLCLKCYRDW-RSRSQSCPFCRDSLKRVNSGDLWIYTDRNE--TIDLTSILQENQKR
        E +CGICME+    V   C H+LC  C++      S  CPFCR   +RV+S   + +T RN    ++L +I+Q++  R
Subjt:  EKECGICMEVNSIVVLPHCIHSLCLKCYRDW-RSRSQSCPFCRDSLKRVNSGDLWIYTDRNE--TIDLTSILQENQKR

Q9M022 E3 ubiquitin-protein ligase AIRP25.0e-9168.24Show/hide
Query:  SFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQ
        SFKDSLKALEAD+Q ANTLA + P E DG  VQMR+SYSPAA  FLFL+QWTDC  AGALGLLRI +Y  Y DGKTTMS++ERK+SIREFY V+FPSLLQ
Subjt:  SFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQ

Query:  LQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYTDRNE
        L  GIT++E+RKQKE+C+ RY+++D   +GK+SEID ERE+ECGIC+E+ + VVLP C HS+C+ CYR+WR+RSQSCPFCR SLKRVNSGDLWIYT   E
Subjt:  LQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYTDRNE

Query:  TIDLTSILQENQKRLFMYINKLPLVVPDPVFLP
          DL +I +EN KRL +YI+KLPLV  DP  +P
Subjt:  TIDLTSILQENQKRLFMYINKLPLVVPDPVFLP

Q9N373 E3 ubiquitin-protein ligase makorin3.2e-0532.29Show/hide
Query:  IDKEREKECGICME-----VNSIVVLPHCIHSLCLKCYRDWRSRSQ-----------SCPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKR
        + K  +K CGICME          +L  C H  CL C R WRS+ Q           SCP CR     V     W+ + + + + L  + +EN KR
Subjt:  IDKEREKECGICME-----VNSIVVLPHCIHSLCLKCYRDWRSRSQ-----------SCPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKR

Arabidopsis top hitse value%identityAlignment
AT3G47160.1 RING/U-box superfamily protein6.9e-10470.61Show/hide
Query:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP
        M K+SFKDSLKALEAD+QHANT+ALD PRE DGA VQMR+SY+PAA F LFLVQWTDC LAG LGLLR+ +Y+TY DGKTTMS+YERK+SI++FY VIFP
Subjt:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP

Query:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT
        SLLQL++GIT+L+DRKQKEVC  RY+ +DE  + KLSEID ERE+ECGICME+N++VVLP+C HSLC+KCYRDW  RS+SCPFCRDSLKRVNSGDLW+  
Subjt:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT

Query:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFL--PLDSHIR
        ++++T+++ +I +EN+KRLF+YI KLPLVVPD VF   P D H++
Subjt:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFL--PLDSHIR

AT3G47160.2 RING/U-box superfamily protein3.2e-10167.32Show/hide
Query:  MGKLSFKDSLKALEADVQHANTL------------ALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERK
        M K+SFKDSLKALEAD+QHANT+            ALD PRE DGA VQMR+SY+PAA F LFLVQWTDC LAG LGLLR+ +Y+TY DGKTTMS+YERK
Subjt:  MGKLSFKDSLKALEADVQHANTL------------ALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERK

Query:  SSIREFYVVIFPSLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSL
        +SI++FY VIFPSLLQL++GIT+L+DRKQKEVC  RY+ +DE  + KLSEID ERE+ECGICME+N++VVLP+C HSLC+KCYRDW  RS+SCPFCRDSL
Subjt:  SSIREFYVVIFPSLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSL

Query:  KRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFL--PLDSHIR
        KRVNSGDLW+  ++++T+++ +I +EN+KRLF+YI KLPLVVPD VF   P D H++
Subjt:  KRVNSGDLWIYTDRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFL--PLDSHIR

AT5G01520.1 RING/U-box superfamily protein3.6e-9268.24Show/hide
Query:  SFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQ
        SFKDSLKALEAD+Q ANTLA + P E DG  VQMR+SYSPAA  FLFL+QWTDC  AGALGLLRI +Y  Y DGKTTMS++ERK+SIREFY V+FPSLLQ
Subjt:  SFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQ

Query:  LQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYTDRNE
        L  GIT++E+RKQKE+C+ RY+++D   +GK+SEID ERE+ECGIC+E+ + VVLP C HS+C+ CYR+WR+RSQSCPFCR SLKRVNSGDLWIYT   E
Subjt:  LQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYTDRNE

Query:  TIDLTSILQENQKRLFMYINKLPLVVPDPVFLP
          DL +I +EN KRL +YI+KLPLV  DP  +P
Subjt:  TIDLTSILQENQKRLFMYINKLPLVVPDPVFLP

AT5G58787.1 RING/U-box superfamily protein2.4e-10472.65Show/hide
Query:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP
        M KLSFKDSLKALEAD+QHANTLALD PRE DGA VQMR+SYSP A FFLFLVQWTDC+LAG LGLLR+ +Y+TY DGKTTMS+YERK+SIREF  VI P
Subjt:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP

Query:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT
        SL QLQ+G+T+++D KQKEVC  RY+++DE    ++SEI+ ERE+ECGICME+NS VVLP+C HSLC+KCYRDWR RSQSCPFCRDSLKRV+SGDLW++ 
Subjt:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT

Query:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFL--PLDSHIR
        D+N+T++LT+I +ENQKRLFMYI KLPLVVPD V+   P D H+R
Subjt:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFL--PLDSHIR

AT5G58787.2 RING/U-box superfamily protein2.0e-9568.57Show/hide
Query:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP
        M KLSFKDSLKALEAD+QHANTLALD PRE DGA VQMR+SYSP A FFLFLVQWTDC+LAG LGLLR+ +Y+TY DGKTTMS+YERK+SIREF      
Subjt:  MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFP

Query:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT
                  +++D KQKEVC  RY+++DE    ++SEI+ ERE+ECGICME+NS VVLP+C HSLC+KCYRDWR RSQSCPFCRDSLKRV+SGDLW++ 
Subjt:  SLLQLQKGITELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYT

Query:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFL--PLDSHIR
        D+N+T++LT+I +ENQKRLFMYI KLPLVVPD V+   P D H+R
Subjt:  DRNETIDLTSILQENQKRLFMYINKLPLVVPDPVFL--PLDSHIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGCTTTCGTTCAAGGATTCGCTCAAAGCGCTTGAAGCCGATGTACAGCATGCCAATACTCTTGCTTTAGACTGTCCAAGAGAGAGTGATGGAGCTTGTGTTCA
AATGAGAATATCTTACAGTCCTGCCGCTCCCTTTTTCCTTTTTCTTGTTCAATGGACTGACTGCCGCCTTGCTGGTGCCTTGGGGCTGCTAAGAATCCATGTCTATGTGA
CTTATCCAGATGGAAAGACCACCATGTCCATTTATGAGCGAAAATCTAGCATTAGAGAATTTTATGTGGTAATCTTCCCTTCTCTTCTGCAACTTCAAAAGGGCATCACA
GAATTGGAAGATAGGAAACAGAAAGAGGTTTGCAATTCCAGATACAAAAGAAGGGATGAAGTTGCAAGGGGAAAACTGTCAGAAATCGACAAAGAAAGAGAAAAGGAGTG
TGGAATTTGCATGGAGGTTAACAGCATTGTTGTTTTGCCTCATTGCATCCATTCTTTGTGCTTGAAATGTTATCGAGATTGGCGCAGTCGTTCTCAGTCGTGTCCCTTCT
GTCGGGATAGCCTCAAGCGAGTGAACTCTGGTGACCTATGGATCTACACAGACAGGAATGAAACGATTGATCTTACTTCAATTTTGCAGGAGAACCAGAAGAGACTATTT
ATGTACATTAATAAGTTGCCATTGGTTGTTCCAGATCCAGTGTTTCTTCCTCTTGATTCTCATATTAGATGA
mRNA sequenceShow/hide mRNA sequence
TAAAATAGAACGGCTCGAGTTCGAAGCTGAGAAAAACCGGCGTTTGCTTGTGCTTTTGCTTGATCAGTTCGAAAGAATTTCGGATTATCGATTACGAGATTTTGTTTTTT
GGTTGATTTTTTTATGTTAGATTATGAGGATAATCTGTAGGGTTTCGGTTCGAGATTTTGATTCTACTTGATCGATCATTCGTTTTCGTTGGATTGGATTTTTCTTTTCC
GGGAAAATTCGACCGCCATGGGAAAGCTTTCGTTCAAGGATTCGCTCAAAGCGCTTGAAGCCGATGTACAGCATGCCAATACTCTTGCTTTAGACTGTCCAAGAGAGAGT
GATGGAGCTTGTGTTCAAATGAGAATATCTTACAGTCCTGCCGCTCCCTTTTTCCTTTTTCTTGTTCAATGGACTGACTGCCGCCTTGCTGGTGCCTTGGGGCTGCTAAG
AATCCATGTCTATGTGACTTATCCAGATGGAAAGACCACCATGTCCATTTATGAGCGAAAATCTAGCATTAGAGAATTTTATGTGGTAATCTTCCCTTCTCTTCTGCAAC
TTCAAAAGGGCATCACAGAATTGGAAGATAGGAAACAGAAAGAGGTTTGCAATTCCAGATACAAAAGAAGGGATGAAGTTGCAAGGGGAAAACTGTCAGAAATCGACAAA
GAAAGAGAAAAGGAGTGTGGAATTTGCATGGAGGTTAACAGCATTGTTGTTTTGCCTCATTGCATCCATTCTTTGTGCTTGAAATGTTATCGAGATTGGCGCAGTCGTTC
TCAGTCGTGTCCCTTCTGTCGGGATAGCCTCAAGCGAGTGAACTCTGGTGACCTATGGATCTACACAGACAGGAATGAAACGATTGATCTTACTTCAATTTTGCAGGAGA
ACCAGAAGAGACTATTTATGTACATTAATAAGTTGCCATTGGTTGTTCCAGATCCAGTGTTTCTTCCTCTTGATTCTCATATTAGATGAAGAATGGGGGACGCACCTCTT
CAATCTGTGAGTAGTAGTTTCAACTTTCTGTGTAGATAATTGATTGTAGGTTGATAAGATAGGGATTGTAGAAGGGATGTTTGCCAAATTTCATTTTCTTAGTTTATCAA
AGTAAATGCTTTTGGTTCACCCAATGCAAAAGTTTGTTGAAATATCAGCAAATGAAATTAGTGATAGGGACAGAGATGAAATTAGTGATAGGGACAGAGATG
Protein sequenceShow/hide protein sequence
MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHVYVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGIT
ELEDRKQKEVCNSRYKRRDEVARGKLSEIDKEREKECGICMEVNSIVVLPHCIHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENQKRLF
MYINKLPLVVPDPVFLPLDSHIR