CuGenDBv2

Gene ID	CmoCh01G007400
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	senescence associated gene 20-like
Genome location	Cmo_Chr01:3818111..3818781
RNA-Seq Expression	CmoCh01G007400
Synteny	CmoCh01G007400
Gene Ontology terms	NA
InterPro domains	IPR009798 - Wound-induced protein Wun1-like IPR032710 - NTF2-like domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6607351.1 Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. sororia]

7.2e-87

97.62

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Query:  TQSPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGVSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGV
        ++SPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGVSSSSFVF PISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGV
Subjt:  TQSPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGVSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGV

Query:  ITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVCGESVPGLVLALQMHIL
        ITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVCGESVPGLVLALQMH+L
Subjt:  ITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVCGESVPGLVLALQMHIL

KAG7037026.1 Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.2e-87

97.62

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Query:  TQSPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGVSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGV
        ++SPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGVSSSSFVF PISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGV
Subjt:  TQSPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGVSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGV

Query:  ITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVCGESVPGLVLALQMHIL
        ITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVCGESVPGLVLALQMH+L
Subjt:  ITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVCGESVPGLVLALQMHIL

XP_022949246.1 senescence associated gene 20-like [Cucurbita moschata]

2.7e-57

100

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Query:  MRLLTGVSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKV
        MRLLTGVSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKV
Subjt:  MRLLTGVSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKV

Query:  CGESVPGLVLALQMHIL
        CGESVPGLVLALQMHIL
Subjt:  CGESVPGLVLALQMHIL

XP_022998178.1 senescence associated gene 20-like [Cucurbita maxima]

9.5e-55

95.73

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Query:  MRLLTGVSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKV
        MRLLTGVSSSSFVF PISIVAFGPTVLAEGY+TKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRF TAADEESPSSSPPYAEADTL TTNCQSVWQSKV
Subjt:  MRLLTGVSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKV

Query:  CGESVPGLVLALQMHIL
        CGESVPGLVLALQMH+L
Subjt:  CGESVPGLVLALQMHIL

XP_023523043.1 senescence associated gene 20-like [Cucurbita pepo subsp. pepo]

8.6e-56

97.44

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Query:  MRLLTGVSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKV
        MRLLTGVSSSSFVF PISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTL TTNCQSVWQSKV
Subjt:  MRLLTGVSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKV

Query:  CGESVPGLVLALQMHIL
        CGESVPGLVLALQMH+L
Subjt:  CGESVPGLVLALQMHIL

TrEMBL top hits

e value

%identity

Alignment

A0A2N9EI45 Uncharacterized protein

1.3e-46

62.87

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Query:  TQSPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGVS-SSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDG
        +Q+  E+ E +  +VTALY+ALSSKD + V RLLAPDLEWWFHGPP+HQ+LMRLLTG S   SFVFVP SIVAFG TVL EGYD +R+VSWVHAWT+TDG
Subjt:  TQSPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGVS-SSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDG

Query:  VITHVKEYLNTSVTVKRFATAADEESPSSSPPYAE-ADTLTTTN-CQSVWQSKVC-GESVPGLVLAL
        +IT V+EY NTSV V RF  +  +    +S   +  A TL + N CQSVW+SK+C   SVPGLVLAL
Subjt:  VITHVKEYLNTSVTVKRFATAADEESPSSSPPYAE-ADTLTTTN-CQSVWQSKVC-GESVPGLVLAL

A0A5A7UY51 Putative Senescence associated protein 20

1.3e-54

72.09

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Query:  LSNTCTPTQSPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGVSSSSFVFVPISIVAFGPT-VLAEGYDTKRAVSWVH
        ++    P  SP EQ E SV  V ALYEAL +KDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTG +SSSFVF PIS+V  GPT VLAEG+  KRAVSWVH
Subjt:  LSNTCTPTQSPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGVSSSSFVFVPISIVAFGPT-VLAEGYDTKRAVSWVH

Query:  AWTITDGVITHVKEYLNTSVTVKRFATAA-DEESPSSSPPYAEADTLTTTNCQSVWQSKVCGESVPGLVLAL
        AWTITDGVITHVKEYLNTSVTVKRF++AA D +SPS SPP          NC+S+WQSKV  ES+P LVLAL
Subjt:  AWTITDGVITHVKEYLNTSVTVKRFATAA-DEESPSSSPPYAEADTLTTTNCQSVWQSKVCGESVPGLVLAL

A0A6J1GBH5 senescence associated gene 20-like

1.3e-57

100

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Query:  MRLLTGVSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKV
        MRLLTGVSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKV
Subjt:  MRLLTGVSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKV

Query:  CGESVPGLVLALQMHIL
        CGESVPGLVLALQMHIL
Subjt:  CGESVPGLVLALQMHIL

A0A6J1KG22 senescence associated gene 20-like

4.6e-55

95.73

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Query:  MRLLTGVSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKV
        MRLLTGVSSSSFVF PISIVAFGPTVLAEGY+TKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRF TAADEESPSSSPPYAEADTL TTNCQSVWQSKV
Subjt:  MRLLTGVSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKV

Query:  CGESVPGLVLALQMHIL
        CGESVPGLVLALQMH+L
Subjt:  CGESVPGLVLALQMHIL

A0A7N2KNK8 Uncharacterized protein

2.1e-47

62.05

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Query:  QSPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTG---VSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITD
        Q+  E+ E +  +V  LY+ALSSKD + V RLLAPDLEWWFHGPP+HQ+LM LLTG    SSSSFVFVP +IVAFG TVL EG+D +R+VSWVHAWT+TD
Subjt:  QSPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTG---VSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITD

Query:  GVITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVCG-ESVPGLVLAL
        G+IT V+EY NTSVTV RF   A +  P SSP      + +   CQSVW+SK+C   SVPGLVLAL
Subjt:  GVITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVCG-ESVPGLVLAL

SwissProt top hits

e value

%identity

Alignment

P20144 Wound-induced protein 1

2.7e-20

46.61

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Query:  MRLLTGVS---SSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQ
        M++LTG +   ++SF F+  +I  FG  VL EG D  R+++WVHAWT+TDGVIT V+EY NTS+TV RF               ++  ++TT +C SVW+
Subjt:  MRLLTGVS---SSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQ

Query:  SKV---CGESVPGLVLAL
        S +    G+SVPGLVLAL
Subjt:  SKV---CGESVPGLVLAL

Q94AK6 Senescence associated gene 20

1.1e-21

48.74

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Query:  MRLLTG---VSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFA-TAADEESPSSSPPYAEADTLTTTNCQSVW
        MR+LTG    SSSSF FVP+S+V+FG TV+AEG D   ++SW+HAWT+ +G+IT V+EY NTS+TV R     A   S   +PP         ++C SVW
Subjt:  MRLLTG---VSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFA-TAADEESPSSSPPYAEADTLTTTNCQSVW

Query:  QSKV---CGESVPGLVLAL
        +S+     G+ VPGLVLA+
Subjt:  QSKV---CGESVPGLVLAL

Arabidopsis top hits

e value

%identity

Alignment

AT3G10985.1 senescence associated gene 20

7.8e-23

48.74

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Query:  MRLLTG---VSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFA-TAADEESPSSSPPYAEADTLTTTNCQSVW
        MR+LTG    SSSSF FVP+S+V+FG TV+AEG D   ++SW+HAWT+ +G+IT V+EY NTS+TV R     A   S   +PP         ++C SVW
Subjt:  MRLLTG---VSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFA-TAADEESPSSSPPYAEADTLTTTNCQSVW

Query:  QSKV---CGESVPGLVLAL
        +S+     G+ VPGLVLA+
Subjt:  QSKV---CGESVPGLVLAL

AT5G01740.1 Nuclear transport factor 2 (NTF2) family protein

6.2e-20

41.94

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Query:  SPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTG--VSSSSFVFVPISIVAFGP---TVLAEGYDTKRAVSWVHAWTIT
        +P  +N+ ++ +   LY+AL   D  TV +++A D+EWWFHGP   Q++MRLLTG      SF F P S+    P    V+AEG++  R V WVH W + 
Subjt:  SPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTG--VSSSSFVFVPISIVAFGP---TVLAEGYDTKRAVSWVHAWTIT

Query:  DGVITHVKEYLNTSVTVKRFATAA
        DGV+T ++EY NT +TV  ++  A
Subjt:  DGVITHVKEYLNTSVTVKRFATAA

Sequences

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CDS sequence

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ATGCTTTGGATTCAATCTTTAGAGCATAGAACCCTCTCGAACACATGCACTCCAACTCAGTCGCCGTCGGAGCAGAACGAGATCAGCGTTGCGATAGTGACAGCACTTTA
CGAGGCGTTGAGTTCCAAAGACGTGGAGACTGTGCACCGCCTTCTGGCGCCGGACTTGGAGTGGTGGTTCCATGGTCCACCGTCGCACCAGTACTTGATGCGTCTCCTCA
CCGGCGTCTCCTCCTCTTCCTTCGTCTTCGTACCCATCTCCATCGTCGCATTTGGGCCCACCGTCCTCGCTGAAGGCTACGACACGAAACGCGCCGTTTCGTGGGTCCAT
GCCTGGACCATTACTGATGGGGTTATAACGCATGTCAAGGAGTATCTCAACACTTCTGTTACTGTCAAGCGTTTCGCCACCGCCGCTGATGAGGAGTCGCCGTCGTCATC
TCCGCCGTATGCGGAGGCGGATACCCTGACTACAACTAACTGTCAGAGTGTGTGGCAGAGCAAGGTGTGCGGCGAGTCGGTCCCTGGTCTTGTTTTGGCACTTCAGATGC
ATATCTTGTGA

mRNA sequence

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Protein sequence

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MLWIQSLEHRTLSNTCTPTQSPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGVSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVH
AWTITDGVITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVCGESVPGLVLALQMHIL

CmoCh01G007400 (gene) of Cucurbita moschata (Rifu) v1 genome