CuGenDBv2

Gene ID	CmoCh01G007440
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	RNA-directed DNA methylation 4
Genome location	Cmo_Chr01:3852534..3856649
RNA-Seq Expression	CmoCh01G007440
Synteny	CmoCh01G007440
Gene Ontology terms	GO:0006306 - DNA methylation (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0009791 - post-embryonic development (biological process) GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domains	IPR013883 - Transcription factor Iwr1 domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6607356.1 RNA-directed DNA methylation 4, partial [Cucurbita argyrosperma subsp. sororia]

2.0e-189

97.55

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Query:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN
        MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN
Subjt:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN

Query:  IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL
        IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDP+DDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL
Subjt:  IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL

Query:  LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES
        LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES
Subjt:  LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES

Query:  TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRWSYR
        TNEESEEDD+DKQSSEAN LEED+LSENGVQLD+DE+YGDFDEDD DSFDYDSNGG  EGEDWRWSYR
Subjt:  TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRWSYR

KAG7037030.1 RNA-directed DNA methylation 4 [Cucurbita argyrosperma subsp. argyrosperma]

1.5e-184

89.33

Show/hide

Query:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN
        MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN
Subjt:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN

Query:  IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL
        IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDP+DDQL DAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL
Subjt:  IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL

Query:  LREFIPSAAEEIESDINANTMKQD-----------------------------------LPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDG
        LREFIPSAAEEIESDINANTMKQD                                   +PVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDG
Subjt:  LREFIPSAAEEIESDINANTMKQD-----------------------------------LPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDG

Query:  PDDSDYESDDSNAENNPHFDYPDEASEEEELESESTNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRW
        PDDSDYESDDSNAENNPHFDYPDEASEEEELESESTNEESEEDDEDKQSSEAN LEEDDLSENGVQLD+DE+YGDFDEDDGDSFDYDSNGG  EGEDWRW
Subjt:  PDDSDYESDDSNAENNPHFDYPDEASEEEELESESTNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRW

Query:  SYR
        SYR
Subjt:  SYR

XP_022949593.1 RNA-directed DNA methylation 4 [Cucurbita moschata]

3.5e-194

100

Show/hide

Query:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN
        MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN
Subjt:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN

Query:  IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL
        IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL
Subjt:  IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL

Query:  LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES
        LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES
Subjt:  LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES

Query:  TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRWSYR
        TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRWSYR
Subjt:  TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRWSYR

XP_022998602.1 RNA-directed DNA methylation 4 [Cucurbita maxima]

1.1e-184

96.47

Show/hide

Query:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN
        MASIGESSSSAPK ADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETF+K ELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN
Subjt:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN

Query:  IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL
        IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVL KKARFEQIWRSRKGIKD +DDQLHDAYHIYDIVRLDTNETSS APKA+CMTLEDQSMLSSYLPL
Subjt:  IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL

Query:  LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES
        LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNV IAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES
Subjt:  LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES

Query:  TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRWSYR
        TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDE DGDSFDYDSNGG EEGE+ RWSYR
Subjt:  TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRWSYR

XP_023522069.1 RNA-directed DNA methylation 4 [Cucurbita pepo subsp. pepo]

2.8e-191

98.37

Show/hide

Query:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN
        MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN
Subjt:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN

Query:  IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL
        IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDP+DDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL
Subjt:  IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL

Query:  LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES
        LREFIPSAAEEIESDINANT+KQDLPVDDYVYDYYTVKNNVPIA+DDASNPFPLIQVDDLDLYDGPDDS+YESDDSNAENNPHFDYPDEASEEEELESES
Subjt:  LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES

Query:  TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRWSYR
        TNEESEEDDEDKQSSEAN LEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGG EEGEDWRWSYR
Subjt:  TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRWSYR

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DWJ0 RNA-directed DNA methylation 4-like isoform X1

1.1e-148

80.54

Show/hide

Query:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN
        MA IGESSSS PK  DEKPVLVRVKRKASQSRLDALWLEINERPLKRP LDF+NLSISET  KEELKTKKI VQHVETLRSSEA+ DI+QSFVAPDAA  
Subjt:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN

Query:  IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL
        IENNLKNEERRRNFKRE  RQ+QLLVK RQEQE++AK ARFEQIWRSRKG+KD +DDQLHD YHIYDIVRLDTNE SSEAP+ E M+LEDQSMLSSYLPL
Subjt:  IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL

Query:  LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES
        LREFIPSAA EIESDI+ + MKQ+LPVDDYVYDYYTVK +V I EDDAS+PFPLIQVDDLD +DGP DSDYE+DDSNAENNP FDYPD    EEELES+S
Subjt:  LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES

Query:  TNEESEEDDEDKQSSEANGLEEDDLS-ENGVQLDEDEIYGDFDEDDG-DSFDYDSNGGQEEGEDWRWSYR
        +N+E E+ D++KQSSE+N +EED+LS E  V+L EDEIY DFDEDDG DSFDYDSNGG ++GEDWRWSYR
Subjt:  TNEESEEDDEDKQSSEANGLEEDDLS-ENGVQLDEDEIYGDFDEDDG-DSFDYDSNGGQEEGEDWRWSYR

A0A5D3BU38 RNA-directed DNA methylation 4-like isoform X1

1.5e-150

81.35

Show/hide

Query:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN
        MA IGESSSS PK  DEKPVLVRVKRKASQSRLDALWLEINERPLKRP LDF+NLSISET  KEELKTKKIFVQHVETLRSSEA+ DI+QSFVAPDAA  
Subjt:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN

Query:  IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL
        IENNLKNEERRRNFKRE  RQ+QLLVK RQEQE++AK ARFEQIWRSRKG+KD +DDQLHD YHIYDIVRLDTNE SSEAP+ E M+LEDQSMLSSYLPL
Subjt:  IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL

Query:  LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES
        LREFIPSAA EIESDI+A+ MKQ+LPVDDYVYDYYTVK +V I EDDAS+PFPLIQVDDLD +DGP DSDYE+DDSNAENNP FDYPD    EEELES+S
Subjt:  LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES

Query:  TNEESEEDDEDKQSSEANGLEEDDLS-ENGVQLDEDEIYGDFDEDDG-DSFDYDSNGGQEEGEDWRWSYR
        +N+E E+ D++KQSSE+N +EED+LS E  V+L EDEIY DFDEDDG DSFDYDSNGG++EGEDWRWSYR
Subjt:  TNEESEEDDEDKQSSEANGLEEDDLS-ENGVQLDEDEIYGDFDEDDG-DSFDYDSNGGQEEGEDWRWSYR

A0A6J1DMY7 RNA-directed DNA methylation 4

2.4e-156

82.8

Show/hide

Query:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN
        MA+IGESSSS PK AD KPVLVRVKRKASQSRLDALWLEINERPLKRPLLDF+NLSISETFQ EELKTKKIFVQHVETL+SSEA+VDI+QSFVAPDAAG 
Subjt:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN

Query:  IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL
        +EN++KNEERRRNFKRE PRQ+QLL K RQEQEVLAK ARFEQIWRSRKG+KD +DDQLHD YHIYDIVRLDTN+ SSE P+ E M+LEDQSMLSSYLPL
Subjt:  IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL

Query:  LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEE-EELESE
        LREFIPSAA EIESDI+AN MKQD+PVDDYVYDYYTVK+++ IAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDE SEE +EL SE
Subjt:  LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEE-EELESE

Query:  STNEESEEDDED---KQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRWSYR
        S+N ES+++D+D   KQSSEAN  EEDDLS +  QL EDEIYGDFD+DD +SFD DSNGG +EGED RWSYR
Subjt:  STNEESEEDDED---KQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRWSYR

A0A6J1GCH8 RNA-directed DNA methylation 4

1.7e-194

100

Show/hide

Query:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN
        MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN
Subjt:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN

Query:  IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL
        IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL
Subjt:  IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL

Query:  LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES
        LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES
Subjt:  LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES

Query:  TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRWSYR
        TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRWSYR
Subjt:  TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRWSYR

A0A6J1K8G0 RNA-directed DNA methylation 4

5.5e-185

96.47

Show/hide

Query:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN
        MASIGESSSSAPK ADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETF+K ELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN
Subjt:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGN

Query:  IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL
        IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVL KKARFEQIWRSRKGIKD +DDQLHDAYHIYDIVRLDTNETSS APKA+CMTLEDQSMLSSYLPL
Subjt:  IENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPL

Query:  LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES
        LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNV IAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES
Subjt:  LREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES

Query:  TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRWSYR
        TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDE DGDSFDYDSNGG EEGE+ RWSYR
Subjt:  TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRWSYR

SwissProt top hits

e value

%identity

Alignment

Q8GYP3 RNA-directed DNA methylation 4

5.7e-62

44.72

Show/hide

Query:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQK-----EELKTKKIFVQHVETLRSSEASVDIIQSFVAP
        M  +GESS+      +EKPV+VRVKRK  QS LDA WLEINERPLKRP LDF  LSIS++ ++     E++K KK+ V+H+ET+  SE + DII SF   
Subjt:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQK-----EELKTKKIFVQHVETLRSSEASVDIIQSFVAP

Query:  DAAGNIENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLS
        D      +  K EER+  FK+++ R+EQ L K+ Q+Q++ ++ ARFEQIWRSRKG K    + +H+  H +D++R+DT E    A   E  +LEDQ ML+
Subjt:  DAAGNIENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLS

Query:  SYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLY-DGPDDSDYESDDSNAENNPHFDYPDEASEEE
        S+LPLLRE IP+AAEEIE+DI      Q    ++YVYDYY V   + I+ED + N FPL+ V+D + + DG D+SDY+S+DSNAE++P  DYP+E  EEE
Subjt:  SYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLY-DGPDDSDYESDDSNAENNPHFDYPDEASEEE

Query:  ELESESTNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDW
        E       E+ ++DD+D+   E +   ++   E   +     + GD   D+ D +  D  G  E  E++
Subjt:  ELESESTNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDW

Arabidopsis top hits

e value

%identity

Alignment

AT2G30280.1 RNA-directed DNA methylation 4

4.0e-63

44.72

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Query:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQK-----EELKTKKIFVQHVETLRSSEASVDIIQSFVAP
        M  +GESS+      +EKPV+VRVKRK  QS LDA WLEINERPLKRP LDF  LSIS++ ++     E++K KK+ V+H+ET+  SE + DII SF   
Subjt:  MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQK-----EELKTKKIFVQHVETLRSSEASVDIIQSFVAP

Query:  DAAGNIENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLS
        D      +  K EER+  FK+++ R+EQ L K+ Q+Q++ ++ ARFEQIWRSRKG K    + +H+  H +D++R+DT E    A   E  +LEDQ ML+
Subjt:  DAAGNIENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLS

Query:  SYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLY-DGPDDSDYESDDSNAENNPHFDYPDEASEEE
        S+LPLLRE IP+AAEEIE+DI      Q    ++YVYDYY V   + I+ED + N FPL+ V+D + + DG D+SDY+S+DSNAE++P  DYP+E  EEE
Subjt:  SYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLY-DGPDDSDYESDDSNAENNPHFDYPDEASEEE

Query:  ELESESTNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDW
        E       E+ ++DD+D+   E +   ++   E   +     + GD   D+ D +  D  G  E  E++
Subjt:  ELESESTNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDW

Sequences

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CDS sequence

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ATGGCCAGCATCGGCGAGAGTTCTTCTTCTGCTCCCAAATTCGCGGACGAAAAGCCAGTCTTAGTTAGGGTTAAGCGCAAAGCTTCCCAGTCTCGACTCGATGCGTTATG
GCTGGAAATCAATGAGAGGCCACTGAAACGACCTCTTTTGGATTTTGATAATTTGTCCATTTCTGAAACGTTCCAGAAAGAGGAACTTAAAACTAAGAAGATTTTTGTAC
AGCATGTGGAGACACTGAGAAGCTCTGAGGCCTCAGTTGACATTATTCAGTCGTTCGTGGCACCAGATGCTGCTGGCAACATTGAAAATAACCTAAAGAATGAGGAGCGC
AGAAGAAATTTTAAGAGAGAGAGTCCAAGACAAGAACAGCTGTTGGTTAAAACTAGACAAGAACAAGAGGTTTTGGCAAAAAAAGCTAGATTTGAGCAAATATGGAGAAG
TAGGAAAGGGATTAAAGATCCCAGAGACGACCAATTACATGATGCATATCATATTTATGATATTGTTCGTCTTGATACAAATGAAACATCAAGTGAAGCACCAAAGGCGG
AGTGTATGACTCTGGAGGATCAAAGTATGTTATCAAGTTATCTGCCTTTACTAAGAGAGTTTATTCCAAGTGCTGCCGAAGAGATCGAGTCAGATATAAATGCAAACACG
ATGAAACAAGATTTGCCCGTAGATGATTATGTATATGACTACTATACTGTGAAGAATAATGTTCCGATTGCCGAGGACGATGCCTCTAATCCATTTCCTTTGATACAAGT
GGACGACTTGGATCTATATGATGGGCCTGATGACTCGGACTATGAAAGTGATGATTCAAATGCTGAAAACAATCCACACTTCGATTACCCAGATGAGGCGTCCGAAGAAG
AAGAGTTGGAAAGTGAATCTACAAATGAAGAATCAGAAGAAGATGATGAGGACAAGCAGTCCTCAGAAGCTAATGGTCTAGAAGAGGACGACCTGTCAGAGAATGGAGTT
CAATTAGACGAGGATGAAATATATGGTGATTTTGACGAAGACGATGGCGATAGTTTTGATTACGATAGTAATGGTGGTCAAGAAGAGGGTGAAGATTGGAGATGGTCCTA
CCGTTGA

mRNA sequence

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GAAGTTCGTAGTTGTTCTCCGGCTCGCATGTTCTAGACCCTGAGCGTCGATCGTGTCTCCGATCGCTTCGCATATGGCCAGCATCGGCGAGAGTTCTTCTTCTGCTCCCA
AATTCGCGGACGAAAAGCCAGTCTTAGTTAGGGTTAAGCGCAAAGCTTCCCAGTCTCGACTCGATGCGTTATGGCTGGAAATCAATGAGAGGCCACTGAAACGACCTCTT
TTGGATTTTGATAATTTGTCCATTTCTGAAACGTTCCAGAAAGAGGAACTTAAAACTAAGAAGATTTTTGTACAGCATGTGGAGACACTGAGAAGCTCTGAGGCCTCAGT
TGACATTATTCAGTCGTTCGTGGCACCAGATGCTGCTGGCAACATTGAAAATAACCTAAAGAATGAGGAGCGCAGAAGAAATTTTAAGAGAGAGAGTCCAAGACAAGAAC
AGCTGTTGGTTAAAACTAGACAAGAACAAGAGGTTTTGGCAAAAAAAGCTAGATTTGAGCAAATATGGAGAAGTAGGAAAGGGATTAAAGATCCCAGAGACGACCAATTA
CATGATGCATATCATATTTATGATATTGTTCGTCTTGATACAAATGAAACATCAAGTGAAGCACCAAAGGCGGAGTGTATGACTCTGGAGGATCAAAGTATGTTATCAAG
TTATCTGCCTTTACTAAGAGAGTTTATTCCAAGTGCTGCCGAAGAGATCGAGTCAGATATAAATGCAAACACGATGAAACAAGATTTGCCCGTAGATGATTATGTATATG
ACTACTATACTGTGAAGAATAATGTTCCGATTGCCGAGGACGATGCCTCTAATCCATTTCCTTTGATACAAGTGGACGACTTGGATCTATATGATGGGCCTGATGACTCG
GACTATGAAAGTGATGATTCAAATGCTGAAAACAATCCACACTTCGATTACCCAGATGAGGCGTCCGAAGAAGAAGAGTTGGAAAGTGAATCTACAAATGAAGAATCAGA
AGAAGATGATGAGGACAAGCAGTCCTCAGAAGCTAATGGTCTAGAAGAGGACGACCTGTCAGAGAATGGAGTTCAATTAGACGAGGATGAAATATATGGTGATTTTGACG
AAGACGATGGCGATAGTTTTGATTACGATAGTAATGGTGGTCAAGAAGAGGGTGAAGATTGGAGATGGTCCTACCGTTGAATTTTTGGTATTATAGGACAGCTATTTTCG
TCTTTGGGAGAGGGATGTTTGTTCTACCGCTTGTCCTATATCAGGTGGCAGGCAAGGCAATGAAGCAAGCATTCGGATTATTTGATATCTGAGTGCCACCAACATTCCCT
CAATCAGTTGGGGGTTCATCATAAGGAGCTACACAATTTGATTGATTGGTGGGCACTGCCAAATATAAGTTGTAGATTATTACATTCTTCTTGGAAGTCCCTCATCTCTG
TAGTTAGTTCTTGTGTAATTTATATAATCAATGAAAGAAATTTCATTCAAATTCTTCTATGTTCG

Protein sequence

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MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEER
RRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANT
MKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESESTNEESEEDDEDKQSSEANGLEEDDLSENGV
QLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRWSYR

CmoCh01G007440 (gene) of Cucurbita moschata (Rifu) v1 genome