; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G007660 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G007660
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioneukaryotic translation initiation factor 2 beta subunit
Genome locationCmo_Chr01:3956036..3958045
RNA-Seq ExpressionCmoCh01G007660
SyntenyCmoCh01G007660
Gene Ontology termsGO:0001731 - formation of translation preinitiation complex (biological process)
GO:0001732 - formation of cytoplasmic translation initiation complex (biological process)
GO:0005850 - eukaryotic translation initiation factor 2 complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0031369 - translation initiation factor binding (molecular function)
InterPro domainsIPR002735 - Translation initiation factor IF2/IF5
IPR016189 - Translation initiation factor IF2/IF5, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4955083.1 hypothetical protein JHK87_040677 [Glycine soja]9.7e-0981.4Show/hide
Query:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL
        MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGR   +  + IL
Subjt:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL

OWM66889.1 hypothetical protein CDL15_Pgr022002 [Punica granatum]7.4e-0986.84Show/hide
Query:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEE
        MHRQPDHV AFLLAELGTSGSLDGQQRLVVKG V+L++
Subjt:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEE

QHO27704.1 Eukaryotic translation initiation factor 2 subunit beta [Arachis hypogaea]9.7e-0981.4Show/hide
Query:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL
        MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGR   +  + IL
Subjt:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL

RVX22932.1 Eukaryotic translation initiation factor 2 subunit beta [Vitis vinifera]4.4e-0965Show/hide
Query:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEILN---FLKTVIELGKSTS
        MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGR   +  + IL     L +++    STS
Subjt:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEILN---FLKTVIELGKSTS

XP_016712105.1 eukaryotic translation initiation factor 2 subunit beta isoform X1 [Gossypium hirsutum]9.7e-0981.4Show/hide
Query:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL
        MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGR   +  + IL
Subjt:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL

TrEMBL top hitse value%identityAlignment
A0A0B2RFJ4 Eukaryotic translation initiation factor 2 subunit beta4.7e-0981.4Show/hide
Query:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL
        MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGR   +  + IL
Subjt:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL

A0A218W2Y1 eIF2B_5 domain-containing protein3.6e-0986.84Show/hide
Query:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEE
        MHRQPDHV AFLLAELGTSGSLDGQQRLVVKG V+L++
Subjt:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEE

A0A438KP14 Eukaryotic translation initiation factor 2 subunit beta2.1e-0965Show/hide
Query:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEILN---FLKTVIELGKSTS
        MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGR   +  + IL     L +++    STS
Subjt:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEILN---FLKTVIELGKSTS

A0A6J1HZQ9 eukaryotic translation initiation factor 2 subunit beta-like4.7e-0981.4Show/hide
Query:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL
        MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGR   +  + IL
Subjt:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL

M5W0M3 eIF2B_5 domain-containing protein4.7e-0981.4Show/hide
Query:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL
        MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGR   +  + IL
Subjt:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL

SwissProt top hitse value%identityAlignment
O24473 Eukaryotic translation initiation factor 2 subunit beta2.4e-1072.09Show/hide
Query:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL
        MHRQP+HVM FLLAE+GTSGSLDGQQRLV+KGR   +  + IL
Subjt:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL

P20042 Eukaryotic translation initiation factor 2 subunit 22.9e-0858.14Show/hide
Query:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL
        +HRQP H++AFLLAELGTSGS+DG  +LV+KGR   ++++ +L
Subjt:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL

P55871 Eukaryotic translation initiation factor 2 subunit beta1.3e-1181.4Show/hide
Query:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL
        MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGR   +  + IL
Subjt:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL

Q41969 Eukaryotic translation initiation factor 2 subunit beta1.1e-1076.74Show/hide
Query:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL
        MHRQPDHVM +LLAELGTSGSLDGQQRLVVKGR   +  + IL
Subjt:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL

Q5E9D0 Eukaryotic translation initiation factor 2 subunit 22.9e-0858.14Show/hide
Query:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL
        +HRQP H++AFLLAELGTSGS+DG  +LV+KGR   ++++ +L
Subjt:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL

Arabidopsis top hitse value%identityAlignment
AT3G07920.1 Translation initiation factor IF2/IF53.2e-1067.44Show/hide
Query:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL
        MHR PDHVMAFLLAELGT G LD QQRLVV+GR    + + +L
Subjt:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL

AT5G01940.1 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein2.2e-0654.76Show/hide
Query:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEI
        MHR+PDHVM FLLA++ T  SL+ QQRL +KG V  ++ Q +
Subjt:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEI

AT5G20920.1 eukaryotic translation initiation factor 2 beta subunit7.7e-1276.74Show/hide
Query:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL
        MHRQPDHVM +LLAELGTSGSLDGQQRLVVKGR   +  + IL
Subjt:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL

AT5G20920.2 eukaryotic translation initiation factor 2 beta subunit7.7e-1276.74Show/hide
Query:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL
        MHRQPDHVM +LLAELGTSGSLDGQQRLVVKGR   +  + IL
Subjt:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL

AT5G20920.3 eukaryotic translation initiation factor 2 beta subunit7.7e-1276.74Show/hide
Query:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL
        MHRQPDHVM +LLAELGTSGSLDGQQRLVVKGR   +  + IL
Subjt:  MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCGGCAGCCAGACCATGTAATGGCTTTCTTATTGGCCGAACTGGGAACCAGTGGATCTCTTGATGGACAGCAGAGATTAGTTGTCAAAGGAAGGGTCATATTGGA
GGAACTTCAGGAAATTTTGAATTTTCTGAAGACTGTAATCGAGCTCGGGAAGTCGACATCCGAAGGTCTACGTGGTACAAAGAGTTTAGCGGTCACCGATAGAAGATCGC
AGAAGTCGTATTTGGTATACTATTGGGGAGTACCCAGTAGACAGATACGTGTGGGGACATACGGTCTCAGTACTTGTCTGTTTATAGAGCACAACTTACCCTATACACAC
GAGACTTACCCCAAAGCCTGTTACAAGGGCAATTTGACTCCCGCGCAAAGCAGAAGGATATGCTTGAGCCTTGTAGGGCTACATCTCATGATATTGCCTAACATTAAGTT
CCTTTTCACATTCAGTGTGGTTCTGGACGACCAGTTGCTCCAAGCTGGTTTTGTTGCTCCTGTTAGCCGGAGGAACGCTGGGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGCATCGGCAGCCAGACCATGTAATGGCTTTCTTATTGGCCGAACTGGGAACCAGTGGATCTCTTGATGGACAGCAGAGATTAGTTGTCAAAGGAAGGGTCATATTGGA
GGAACTTCAGGAAATTTTGAATTTTCTGAAGACTGTAATCGAGCTCGGGAAGTCGACATCCGAAGGTCTACGTGGTACAAAGAGTTTAGCGGTCACCGATAGAAGATCGC
AGAAGTCGTATTTGGTATACTATTGGGGAGTACCCAGTAGACAGATACGTGTGGGGACATACGGTCTCAGTACTTGTCTGTTTATAGAGCACAACTTACCCTATACACAC
GAGACTTACCCCAAAGCCTGTTACAAGGGCAATTTGACTCCCGCGCAAAGCAGAAGGATATGCTTGAGCCTTGTAGGGCTACATCTCATGATATTGCCTAACATTAAGTT
CCTTTTCACATTCAGTGTGGTTCTGGACGACCAGTTGCTCCAAGCTGGTTTTGTTGCTCCTGTTAGCCGGAGGAACGCTGGGACATGATTTTTACTTGTTATATCGTAGC
ATGATGTTTTTGATACTATCATGTGACAGTCCAAGTTCACCGTTAGTAGATATTATCCGCTTTGGCCCATTACGTATCGCCATCAGCCTCACGGTTTTAAAACGTGTCTA
CTAGGAAGAAGTTTCCGCACCTTTATAAGAAATGTTTTGTTCTTCTCTCCACTGAATGTGGGATCTCACAATTCACTCTTTTGAAGACCCAACGTACTTGTTGGCACACT
ACTTAGTATCTGGCTCTGATACCATTTGTAACAGCCCAAGTTCACTGCAGATATTGTTCGTTTTGGCTCGTTACATATCGTCGGTAGCCTCACGGTTTTAAAACGCATCT
ACTAATGAGAGGTTTTCACACCCTCGTAATGAATGTTTCGTTCTCCTTTCCAAC
Protein sequenceShow/hide protein sequence
MHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRVILEELQEILNFLKTVIELGKSTSEGLRGTKSLAVTDRRSQKSYLVYYWGVPSRQIRVGTYGLSTCLFIEHNLPYTH
ETYPKACYKGNLTPAQSRRICLSLVGLHLMILPNIKFLFTFSVVLDDQLLQAGFVAPVSRRNAGT