; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G008880 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G008880
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAnkyrin repeat-containing protein
Genome locationCmo_Chr01:4846164..4847168
RNA-Seq ExpressionCmoCh01G008880
SyntenyCmoCh01G008880
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR026961 - PGG domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607507.1 hypothetical protein SDJN03_00849, partial [Cucurbita argyrosperma subsp. sororia]2.5e-8493.3Show/hide
Query:  MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFI
        MASRLEEEAPNQIGNG EDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSS+VAGTSIMATKFPAEFT F+VGVTVCMIVSMLQFI
Subjt:  MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFI

Query:  VLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQKCMR
        VLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTP+SMR + ITVLALTIGIG+V VGISLFK+KIQQ+CMR
Subjt:  VLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQKCMR

XP_022949196.1 uncharacterized protein LOC111452618 [Cucurbita moschata]5.1e-90100Show/hide
Query:  MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFI
        MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFI
Subjt:  MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFI

Query:  VLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQKCMR
        VLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQKCMR
Subjt:  VLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQKCMR

XP_022973456.1 uncharacterized protein LOC111471995 [Cucurbita maxima]7.0e-7990.34Show/hide
Query:  MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFI
        MASRLEEEAPNQIGNG EDQNKEETWQKRDREYLL+VVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTF+VGVTVCMIVSMLQFI
Subjt:  MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFI

Query:  VLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQK
        VL  ELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPE M  + +TVL  +IG GVVLVGISLFKQKI++K
Subjt:  VLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQK

XP_023523646.1 uncharacterized protein LOC111787821 isoform X1 [Cucurbita pepo subsp. pepo]4.1e-7990.34Show/hide
Query:  MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFI
        MASRLEEEAPNQIGNG EDQNKEETWQKRDREYLL+VVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFP EFTTF+VGVTVCMIVSMLQF 
Subjt:  MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFI

Query:  VLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQK
        VL  ELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPE M  + +TVLA +IG G+VLVGISLFKQKIQQK
Subjt:  VLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQK

XP_023523647.1 uncharacterized protein LOC111787821 isoform X2 [Cucurbita pepo subsp. pepo]4.7e-2796.92Show/hide
Query:  MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSS
        MASRLEEEAPNQIGNG EDQNKEETWQKRDREYLL+VVTFMATVAFQAGVSPPGGVWQQDDKNSS
Subjt:  MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSS

TrEMBL top hitse value%identityAlignment
A0A0A0KFJ5 PGG domain-containing protein3.1e-2441.86Show/hide
Query:  MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFI
        MASR+EE+            + E+T QK D E L++++TF+ T++FQAG +PPGGVWQ+  +     AG SIMA+K P++F  F+VGVTV M++S  Q +
Subjt:  MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFI

Query:  VLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQK
         L  ELP +  S SR ++Y +L   + ++  +Y SS+ A TP SM  +   VL   + IGVV+V I ++ QK
Subjt:  VLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQK

A0A0A0KGU1 PGG domain-containing protein4.0e-2442.59Show/hide
Query:  GEDQNK---EETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVE---LPSDT
        G ++NK      W + D ++L++V TF+ATVAFQ G +PPGGVWQ+DDK     AG SIMATK P++F  F+V +T C + S +QF VLF++   + +  
Subjt:  GEDQNK---EETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVE---LPSDT

Query:  PSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALT-IGIGVVLVGISLFKQ
         S SR  LY T+  A+ SM  +Y  SV+AYTP+S       +  +T +G  + L  IS++ Q
Subjt:  PSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALT-IGIGVVLVGISLFKQ

A0A5A7VFP9 Ankyrin repeat-containing protein ITN1-like6.2e-2541.62Show/hide
Query:  MASRLEEEAPNQIGNGGEDQ-NKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQF
        MASR+EE+    I    E+Q + E++WQK D E L++++TF+ T++FQAG +PPGGVWQ   +     AG SIMA+K P++F  F+VGV+  M++S  Q 
Subjt:  MASRLEEEAPNQIGNGGEDQ-NKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQF

Query:  IVLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQK
        + L  ELP +  S SR ++Y +L F + ++  +Y SSV A TP SM  +  T L   + +G V++ I ++ QK
Subjt:  IVLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQK

A0A6J1GBC1 uncharacterized protein LOC1114526182.5e-90100Show/hide
Query:  MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFI
        MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFI
Subjt:  MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFI

Query:  VLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQKCMR
        VLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQKCMR
Subjt:  VLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQKCMR

A0A6J1I8P6 uncharacterized protein LOC1114719953.4e-7990.34Show/hide
Query:  MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFI
        MASRLEEEAPNQIGNG EDQNKEETWQKRDREYLL+VVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTF+VGVTVCMIVSMLQFI
Subjt:  MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFI

Query:  VLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQK
        VL  ELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPE M  + +TVL  +IG GVVLVGISLFKQKI++K
Subjt:  VLFVELPSDTPSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34050.1 Ankyrin repeat family protein2.4e-0529.23Show/hide
Query:  REYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSLSR--KYLYYTLFFALGS
        R  + IV   +A+VAF  G++PPGGV+Q+        AG ++        F  F +   + +  S+   I+L   +P  T  L    K  +  L+ A+ S
Subjt:  REYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSLSR--KYLYYTLFFALGS

Query:  MLSSYVSSVKAYTP--ESMRTQTITVLALT
        M  +YVS+     P  E  R    TVL+++
Subjt:  MLSSYVSSVKAYTP--ESMRTQTITVLALT

AT5G50140.1 Ankyrin repeat family protein7.8e-0427.74Show/hide
Query:  EDQNKEETWQ----KRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSL
        E + KE+  Q    +  R  + +V   +A+V F  G++PPGGV+Q         AG ++        F  F V  ++ +  S+   I+L   +P  T SL
Subjt:  EDQNKEETWQ----KRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSL

Query:  SRKYLYYT---LFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVG
         + +L  T   ++ A+ +M S+YV+      P S   +   VL  T+ I  V++G
Subjt:  SRKYLYYT---LFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVG

AT5G51160.1 Ankyrin repeat family protein4.6e-0427.34Show/hide
Query:  REYLLIVVTFMATVAFQAGVSPPGGVWQQD-----DKNSSIV---------AGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSLSRK
        R  LL+V + +AT  FQA ++PPGG WQ        +N++ V         AG SIM T     FT FV   T+   VS+    +L +  P         
Subjt:  REYLLIVVTFMATVAFQAGVSPPGGVWQQD-----DKNSSIV---------AGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDTPSLSRK

Query:  YLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLAL
         L + L   + +M  S+ +++ +  P+ ++   I + ++
Subjt:  YLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTAGGCTTGAGGAAGAAGCACCCAACCAAATTGGAAATGGTGGAGAAGATCAGAACAAGGAGGAGACTTGGCAGAAGAGAGATAGAGAGTATCTGTTGATAGT
AGTAACATTCATGGCAACCGTTGCTTTCCAAGCCGGGGTGAGCCCTCCTGGTGGTGTCTGGCAACAAGACGATAAGAACTCGAGTATTGTAGCTGGGACATCGATAATGG
CCACAAAATTCCCAGCTGAGTTCACCACATTCGTCGTTGGCGTAACAGTGTGCATGATAGTTTCAATGTTGCAATTTATAGTGCTGTTTGTTGAGTTGCCAAGCGACACA
CCCTCACTTTCGAGGAAATATCTGTACTACACTTTGTTCTTCGCATTAGGCAGCATGCTCTCGTCTTATGTATCATCGGTAAAAGCTTATACGCCGGAGTCGATGAGAAC
CCAGACCATCACTGTTCTTGCTCTTACTATTGGAATTGGTGTTGTTTTAGTGGGGATTTCATTGTTCAAACAGAAGATACAGCAGAAATGTATGCGTTAA
mRNA sequenceShow/hide mRNA sequence
CTCAGCCATGGCAAGTAGGCTTGAGGAAGAAGCACCCAACCAAATTGGAAATGGTGGAGAAGATCAGAACAAGGAGGAGACTTGGCAGAAGAGAGATAGAGAGTATCTGT
TGATAGTAGTAACATTCATGGCAACCGTTGCTTTCCAAGCCGGGGTGAGCCCTCCTGGTGGTGTCTGGCAACAAGACGATAAGAACTCGAGTATTGTAGCTGGGACATCG
ATAATGGCCACAAAATTCCCAGCTGAGTTCACCACATTCGTCGTTGGCGTAACAGTGTGCATGATAGTTTCAATGTTGCAATTTATAGTGCTGTTTGTTGAGTTGCCAAG
CGACACACCCTCACTTTCGAGGAAATATCTGTACTACACTTTGTTCTTCGCATTAGGCAGCATGCTCTCGTCTTATGTATCATCGGTAAAAGCTTATACGCCGGAGTCGA
TGAGAACCCAGACCATCACTGTTCTTGCTCTTACTATTGGAATTGGTGTTGTTTTAGTGGGGATTTCATTGTTCAAACAGAAGATACAGCAGAAATGTATGCGTTAACTG
TTCAGTGGACAATATCATGAGAGCTTAAGCTCAAAGTGGACAATATCATACCATTGTGGATAGTTGTGTTCATCCAACACAAAGCAGGTCTCGAAGAACAAGCACCCCAA
CACATGGCCCAAAGCCTATGTGTTTGTCAAACCAGGTTCTTGAAAAAATTCTTAGGGCGAGCTACAACCTATCTAACTTCACCTTCTTACCTTGGTTCTTGCACAAATTC
TTCAAGAATGGATTAAAGCTCTTGTATTATCATATGTATGAGAATTTGGCACCTACGCATATGTATTCAAACACATTGAAGGCAC
Protein sequenceShow/hide protein sequence
MASRLEEEAPNQIGNGGEDQNKEETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIMATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVELPSDT
PSLSRKYLYYTLFFALGSMLSSYVSSVKAYTPESMRTQTITVLALTIGIGVVLVGISLFKQKIQQKCMR