; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G009270 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G009270
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRNA-binding protein 24 isoform X1
Genome locationCmo_Chr01:5331589..5333284
RNA-Seq ExpressionCmoCh01G009270
SyntenyCmoCh01G009270
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR037366 - BOULE/DAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607545.1 putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. sororia]5.6e-15897.27Show/hide
Query:  MSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MSPANLG QFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPNHEKKKWELA-GGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYPMYSTGP
        STPNHEKKKWELA GGGGGGGGGGGGRNFRV SCFQSGFGGNVGSAFHSTPTFP YAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGG TAQYPMYSTGP
Subjt:  STPNHEKKKWELA-GGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYPMYSTGP

Query:  GGLMSGAAAFYPYFQFGEGS-GGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR
        GGLMSGAAAFYPYFQFGEGS GGGGANGFSAGSGQQGYG QYPHHLFQYSAGINSTATTLPQHYGGPPMSLP TPPTLPSGVTMALTTPIPHR
Subjt:  GGLMSGAAAFYPYFQFGEGS-GGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR

KAG7037185.1 putative RNA-binding protein ARP1 [Cucurbita argyrosperma subsp. argyrosperma]3.3e-15896.95Show/hide
Query:  MSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MSPANLG QFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPNHEKKKWELA---GGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYPMYST
        STPNHEKKKWELA   GGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFP YAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYPMYST
Subjt:  STPNHEKKKWELA---GGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYPMYST

Query:  GPGGLMSGAAAFYPYFQFGEGS-GGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR
        GPGGLMSGAAAFYPYFQFGEGS GGGGANGFSAGSGQQGYG QYPHHLFQYSAGINSTATT PQHYGGPPMSLP TPPTLPSGVTMALTTPIPHR
Subjt:  GPGGLMSGAAAFYPYFQFGEGS-GGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR

XP_022932483.1 probable RNA-binding protein ARP1 isoform X1 [Cucurbita moschata]1.9e-169100Show/hide
Query:  MSEGWKSMSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASL
        MSEGWKSMSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASL
Subjt:  MSEGWKSMSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASL

Query:  GVQRSKPSTPNHEKKKWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYP
        GVQRSKPSTPNHEKKKWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYP
Subjt:  GVQRSKPSTPNHEKKKWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYP

Query:  MYSTGPGGLMSGAAAFYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR
        MYSTGPGGLMSGAAAFYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR
Subjt:  MYSTGPGGLMSGAAAFYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR

XP_022932484.1 probable RNA-binding protein ARP1 isoform X2 [Cucurbita moschata]1.1e-161100Show/hide
Query:  MSEGWKSMSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASL
        MSEGWKSMSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASL
Subjt:  MSEGWKSMSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASL

Query:  GVQRSKPSTPNHEKKKWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYP
        GVQRSKPSTPNHEKKKWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYP
Subjt:  GVQRSKPSTPNHEKKKWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYP

Query:  MYSTGPGGLMSGAAAFYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPS
        MYSTGPGGLMSGAAAFYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPS
Subjt:  MYSTGPGGLMSGAAAFYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPS

XP_022932485.1 probable RNA-binding protein ARP1 isoform X3 [Cucurbita moschata]6.0e-160100Show/hide
Query:  QFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPNHEKK
        QFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPNHEKK
Subjt:  QFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPNHEKK

Query:  KWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYPMYSTGPGGLMSGAAA
        KWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYPMYSTGPGGLMSGAAA
Subjt:  KWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYPMYSTGPGGLMSGAAA

Query:  FYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR
        FYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR
Subjt:  FYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR

TrEMBL top hitse value%identityAlignment
A0A6J1EX40 probable RNA-binding protein ARP1 isoform X25.3e-162100Show/hide
Query:  MSEGWKSMSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASL
        MSEGWKSMSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASL
Subjt:  MSEGWKSMSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASL

Query:  GVQRSKPSTPNHEKKKWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYP
        GVQRSKPSTPNHEKKKWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYP
Subjt:  GVQRSKPSTPNHEKKKWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYP

Query:  MYSTGPGGLMSGAAAFYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPS
        MYSTGPGGLMSGAAAFYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPS
Subjt:  MYSTGPGGLMSGAAAFYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPS

A0A6J1F1U2 probable RNA-binding protein ARP1 isoform X19.0e-170100Show/hide
Query:  MSEGWKSMSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASL
        MSEGWKSMSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASL
Subjt:  MSEGWKSMSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASL

Query:  GVQRSKPSTPNHEKKKWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYP
        GVQRSKPSTPNHEKKKWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYP
Subjt:  GVQRSKPSTPNHEKKKWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYP

Query:  MYSTGPGGLMSGAAAFYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR
        MYSTGPGGLMSGAAAFYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR
Subjt:  MYSTGPGGLMSGAAAFYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR

A0A6J1F2C0 probable RNA-binding protein ARP1 isoform X32.9e-160100Show/hide
Query:  QFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPNHEKK
        QFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPNHEKK
Subjt:  QFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPNHEKK

Query:  KWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYPMYSTGPGGLMSGAAA
        KWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYPMYSTGPGGLMSGAAA
Subjt:  KWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYPMYSTGPGGLMSGAAA

Query:  FYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR
        FYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR
Subjt:  FYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR

A0A6J1IBB7 probable RNA-binding protein ARP1 isoform X31.8e-14691.44Show/hide
Query:  MSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MSPANLG QFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFR+PEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPNHEKKKWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYPMYSTGPG
        STPNH             GGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFP YAVHQGIPYNLYGYSSYSPD+ YPTSYYNVYGGATAQYP+YSTGPG
Subjt:  STPNHEKKKWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYPMYSTGPG

Query:  GLMSGAAAFYPYFQFGEGS-GGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR
        GLMSGAAAFYPYFQFGEGS GGGGANGFS GSGQQGYG QYPHHLFQYSAGINSTATT PQHYGGPPMSLP TPPTLPSGVTMALT PIPHR
Subjt:  GLMSGAAAFYPYFQFGEGS-GGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR

A0A6J1ID05 probable RNA-binding protein ARP1 isoform X11.0e-15294.18Show/hide
Query:  MSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
        MSPANLG QFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFR+PEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP
Subjt:  MSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKP

Query:  STPNHEKKKWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYPMYSTGPG
        STPNHEKKKWELA     GGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFP YAVHQGIPYNLYGYSSYSPD+ YPTSYYNVYGGATAQYP+YSTGPG
Subjt:  STPNHEKKKWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYPMYSTGPG

Query:  GLMSGAAAFYPYFQFGEGS-GGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR
        GLMSGAAAFYPYFQFGEGS GGGGANGFS GSGQQGYG QYPHHLFQYSAGINSTATT PQHYGGPPMSLP TPPTLPSGVTMALT PIPHR
Subjt:  GLMSGAAAFYPYFQFGEGS-GGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR

SwissProt top hitse value%identityAlignment
Q5ZMA3 RNA-binding protein 241.0e-2463.53Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQ
        DTTYTK+FVGGL + T   ++ KYF+ FGDI EAVVITD+ TG+S+GYGFVT  D  AA RAC D  P+IDGR+AN NLA LG +
Subjt:  DTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQ

Q62176 RNA-binding protein 383.4e-2557.73Show/hide
Query:  SMSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQ
        S +P+ + G   DTT+TK+FVGGL + T   ++ KYF+ FGDI EAVVITD+ TG+S+GYGFVT  D  AA RAC D  P+IDGR+AN NLA LG +
Subjt:  SMSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQ

Q6GQD3 RNA-binding protein 24-A1.0e-2463.53Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQ
        DTTYTK+FVGGL + T   ++ KYF+ FGDI EAVVITD+ TG+S+GYGFVT  D  AA RAC D  P+IDGR+AN NLA LG +
Subjt:  DTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQ

Q9H0Z9 RNA-binding protein 387.7e-2557.89Show/hide
Query:  SPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQ
        +P  + G   DTT+TK+FVGGL + T   ++ KYF+ FGDI EAVVITD+ TG+S+GYGFVT  D  AA RAC D  P+IDGR+AN NLA LG +
Subjt:  SPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQ

Q9M1S3 Probable RNA-binding protein ARP11.8e-2636.98Show/hide
Query:  NLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPN
        N+ G FGDT  TKVFVGGLAW+THK+ M  +F ++GDILEAV+I+DK T RSKGYGFVTF+D +AA RAC D+ P+I+GRRANCNLASLG +  K  T  
Subjt:  NLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPN

Query:  HEKKKWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYPMYS-TGPGGLM
          ++         G   G       V +  Q  +     +  H          HQ +P+  YGY S     N   +    Y G T     Y+   P    
Subjt:  HEKKKWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYPMYS-TGPGGLM

Query:  SGAAAFYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMS
             +Y +  +     GGG     A S    +   YP+H  Q + G    + + P  +  PP+S
Subjt:  SGAAAFYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMS

Arabidopsis top hitse value%identityAlignment
AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein9.2e-5850.71Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPNHEKKKW
        GDTTYTKVFVGGLAWETHK+TM K+F+QFG+ILEAVVITDKA+GRSKGYGFVTFR+ EAA  ACVDA PVIDGRRANCNLASLG+QRSKPSTPNH     
Subjt:  GDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPNHEKKKW

Query:  ELAGGGGGGGGGGGGRNFRV-LSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDY-NYPTSYYNVYGGAT-AQYPMY---STGPGGLMS
                 GGGG   N RV +S  Q+GFG          P  P +  +  +P NL+GYS YSPDY ++PT+ Y +YG  +  QY +Y   ++G GGL +
Subjt:  ELAGGGGGGGGGGGGRNFRV-LSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDY-NYPTSYYNVYGGAT-AQYPMY---STGPGGLMS

Query:  GAAAFYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSL-------PLTPPTLP
         AA+  P++  G G GG           Q      + HHL  Y+          P HY  P  S+       PL PP +P
Subjt:  GAAAFYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSL-------PLTPPTLP

AT1G22910.2 RNA-binding (RRM/RBD/RNP motifs) family protein4.6e-5751.7Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPNHEKKKW
        GDTTYTKVFVGGLAWETHK+TM K+F+QFG+ILEAVVITDKA+GRSKGYGFVTFR+ EAA  ACVDA PVIDGRRANCNLASLG+QRSKPSTPNH     
Subjt:  GDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPNHEKKKW

Query:  ELAGGGGGGGGGGGGRNFRV-LSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDY-NYPTSYYNVYGGAT-AQYPMY---STGPGGLMS
                 GGGG   N RV +S  Q+GFG          P  P +  +  +P NL+GYS YSPDY ++PT+ Y +YG  +  QY +Y   ++G GGL +
Subjt:  ELAGGGGGGGGGGGGRNFRV-LSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDY-NYPTSYYNVYGGAT-AQYPMY---STGPGGLMS

Query:  GAAAFYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSL
         AA+  P++  G G GG           Q      + HHL  Y+          P HY  P  S+
Subjt:  GAAAFYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSL

AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein3.9e-5649.3Show/hide
Query:  GDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPNHEKKKW
        GDTTYTKVFVGGLAWETHK+TM K+F+QFG+ILEAVVITDKA+GRSKGYGFVTFR+ EAA  ACVDA PVIDGRRANCNLASLG+QRSKPSTPNH     
Subjt:  GDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPNHEKKKW

Query:  ELAGGGGGGGGGGGGRNFRV-LSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDY-NYPTSYYNVYGGAT-AQYPMY---STGPGGLMS
                 GGGG   N RV +S  Q+GFG          P  P +  +  +P NL+GYS YSPDY ++PT+ Y +YG  +  QY +Y   ++G GGL +
Subjt:  ELAGGGGGGGGGGGGRNFRV-LSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDY-NYPTSYYNVYGGAT-AQYPMY---STGPGGLMS

Query:  GAAAFYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPI
         AA+  P++  G G GG           Q      + HHL  Y+          P HY  P  S+        S  T + + P+
Subjt:  GAAAFYPYFQFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPI

AT1G33470.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.9e-6354.78Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPNHEKKKWE
        DTT+TKVFVGGLAWETHK ++  YF+QFGDI+EAVVITDK++GRSKGYGFVTF DPEAA +ACVD APVIDGRRANCNLA+ GVQRSKPS+P H      
Subjt:  DTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPNHEKKKWE

Query:  LAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPY-NLYGYSSYSPDYNYPT-SYYNVYGGATAQYPMYSTGP--GGLMSGAA
                 G  GGR  +V S F++ F G   +A  S   F  Y     +PY N +G+SSYS DYNYPT SYYNVYGGATAQ+PMY +GP  G   + AA
Subjt:  LAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPY-NLYGYSSYSPDYNYPT-SYYNVYGGATAQYPMYSTGP--GGLMSGAA

Query:  AFYPYFQFGEGSGGGGANGFSAGSGQQGYGG-QYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPS
         FYPY QF EG+G              GY    YP+H+F YSA         P H G P    P   P +PS
Subjt:  AFYPYFQFGEGSGGGGANGFSAGSGQQGYGG-QYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPS

AT1G33470.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.8e-6554.98Show/hide
Query:  DTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPNHEKKKWE
        DTT+TKVFVGGLAWETHK ++  YF+QFGDI+EAVVITDK++GRSKGYGFVTF DPEAA +ACVD APVIDGRRANCNLA+ GVQRSKPS+P H      
Subjt:  DTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPNHEKKKWE

Query:  LAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPY-NLYGYSSYSPDYNYPTSYYNVYGGATAQYPMYSTGP--GGLMSGAAA
                 G  GGR  +V S F++ F G   +A  S   F  Y     +PY N +G+SSYS DYNYPTSYYNVYGGATAQ+PMY +GP  G   + AA 
Subjt:  LAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPY-NLYGYSSYSPDYNYPTSYYNVYGGATAQYPMYSTGP--GGLMSGAAA

Query:  FYPYFQFGEGSGGGGANGFSAGSGQQGYGG-QYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPS
        FYPY QF EG+G              GY    YP+H+F YSA         P H G P    P   P +PS
Subjt:  FYPYFQFGEGSGGGGANGFSAGSGQQGYGG-QYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGAAGGTTGGAAGAGCATGAGTCCAGCCAACTTGGGAGGTCAGTTTGGAGACACCACTTACACCAAGGTCTTCGTGGGCGGCTTGGCTTGGGAGACCCACAAGGA
CACCATGAACAAATACTTCCAACAGTTTGGGGATATCTTGGAAGCCGTTGTTATTACCGACAAGGCCACCGGTCGATCCAAAGGCTATGGATTTGTCACTTTCCGGGACC
CCGAAGCCGCCATGAGGGCTTGCGTGGATGCTGCTCCGGTCATCGACGGGCGGAGGGCCAATTGCAACCTCGCTTCTCTTGGGGTTCAAAGATCCAAACCCTCAACACCC
AACCACGAGAAAAAGAAATGGGAATTGGCAGGCGGAGGAGGAGGCGGCGGCGGCGGTGGTGGAGGAAGAAACTTTAGGGTATTGAGCTGTTTCCAGAGTGGATTTGGAGG
GAATGTTGGATCAGCTTTTCATTCAACACCAACTTTCCCTCGTTATGCTGTCCACCAAGGGATCCCTTACAATCTCTATGGGTACTCTTCCTATTCACCCGACTACAATT
ACCCTACGAGCTATTACAATGTGTACGGCGGCGCAACTGCTCAGTACCCTATGTATAGTACTGGTCCCGGCGGCTTAATGAGTGGTGCGGCGGCGTTCTACCCGTATTTC
CAGTTTGGGGAAGGAAGTGGCGGCGGCGGAGCCAATGGGTTCAGTGCTGGTTCTGGTCAACAGGGTTATGGGGGTCAGTACCCTCACCATCTGTTTCAGTACTCGGCTGG
GATTAATTCAACTGCAACCACGCTCCCACAGCACTATGGTGGTCCTCCTATGTCTCTCCCGCTCACGCCACCCACCCTGCCGTCAGGCGTGACAATGGCTCTAACTACAC
CAATCCCACATCGCTAG
mRNA sequenceShow/hide mRNA sequence
CTCTCTCTCTCTCTCTCTCTCTCTCTCCCCTCACCCCTCCATTTGTTGTTCTGAGATCTAATCTGAAATCCCAAAGAAGAGCATGAGTGAAGGTTGGAAGAGCATGAGTC
CAGCCAACTTGGGAGGTCAGTTTGGAGACACCACTTACACCAAGGTCTTCGTGGGCGGCTTGGCTTGGGAGACCCACAAGGACACCATGAACAAATACTTCCAACAGTTT
GGGGATATCTTGGAAGCCGTTGTTATTACCGACAAGGCCACCGGTCGATCCAAAGGCTATGGATTTGTCACTTTCCGGGACCCCGAAGCCGCCATGAGGGCTTGCGTGGA
TGCTGCTCCGGTCATCGACGGGCGGAGGGCCAATTGCAACCTCGCTTCTCTTGGGGTTCAAAGATCCAAACCCTCAACACCCAACCACGAGAAAAAGAAATGGGAATTGG
CAGGCGGAGGAGGAGGCGGCGGCGGCGGTGGTGGAGGAAGAAACTTTAGGGTATTGAGCTGTTTCCAGAGTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTCAACA
CCAACTTTCCCTCGTTATGCTGTCCACCAAGGGATCCCTTACAATCTCTATGGGTACTCTTCCTATTCACCCGACTACAATTACCCTACGAGCTATTACAATGTGTACGG
CGGCGCAACTGCTCAGTACCCTATGTATAGTACTGGTCCCGGCGGCTTAATGAGTGGTGCGGCGGCGTTCTACCCGTATTTCCAGTTTGGGGAAGGAAGTGGCGGCGGCG
GAGCCAATGGGTTCAGTGCTGGTTCTGGTCAACAGGGTTATGGGGGTCAGTACCCTCACCATCTGTTTCAGTACTCGGCTGGGATTAATTCAACTGCAACCACGCTCCCA
CAGCACTATGGTGGTCCTCCTATGTCTCTCCCGCTCACGCCACCCACCCTGCCGTCAGGCGTGACAATGGCTCTAACTACACCAATCCCACATCGCTAG
Protein sequenceShow/hide protein sequence
MSEGWKSMSPANLGGQFGDTTYTKVFVGGLAWETHKDTMNKYFQQFGDILEAVVITDKATGRSKGYGFVTFRDPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTP
NHEKKKWELAGGGGGGGGGGGGRNFRVLSCFQSGFGGNVGSAFHSTPTFPRYAVHQGIPYNLYGYSSYSPDYNYPTSYYNVYGGATAQYPMYSTGPGGLMSGAAAFYPYF
QFGEGSGGGGANGFSAGSGQQGYGGQYPHHLFQYSAGINSTATTLPQHYGGPPMSLPLTPPTLPSGVTMALTTPIPHR