; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G009350 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G009350
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCmo_Chr01:5416812..5418640
RNA-Seq ExpressionCmoCh01G009350
SyntenyCmoCh01G009350
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607551.1 Chlorophyll a-b binding protein CP26, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]8.2e-16299.66Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAP PKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

KAG7037190.1 Chlorophyll a-b binding protein CP26, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-16199.31Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVA+FGKKPA APKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

XP_022932496.1 chlorophyll a-b binding protein CP26, chloroplastic-like [Cucurbita moschata]2.8e-162100Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

XP_022973438.1 chlorophyll a-b binding protein CP26, chloroplastic [Cucurbita maxima]1.7e-15998.28Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLS SGASARSASSASSPVTSKIVA+FGKKPA APKPKPSAVSP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

XP_023523842.1 chlorophyll a-b binding protein CP26, chloroplastic-like [Cucurbita pepo subsp. pepo]2.4e-16199.31Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLA STA+ASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

TrEMBL top hitse value%identityAlignment
A0A0A0KXR5 Chlorophyll a-b binding protein, chloroplastic2.4e-15193.81Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSF   S+RSA S S+P T K VALFGKKPA   KPKPSA SP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

A0A1S3CBI9 Chlorophyll a-b binding protein, chloroplastic1.2e-15093.81Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFS  SA    SASSP T K VALFGKKPA   KPKP+  SP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

A0A6J1DTI7 Chlorophyll a-b binding protein, chloroplastic7.0e-15194.16Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSF G S RSA SASS VT K VALFGKKPA   KP  +AVSP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGN ERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

A0A6J1EWI5 Chlorophyll a-b binding protein, chloroplastic1.4e-162100Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

A0A6J1ID20 Chlorophyll a-b binding protein, chloroplastic8.3e-16098.28Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLS SGASARSASSASSPVTSKIVA+FGKKPA APKPKPSAVSP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

SwissProt top hitse value%identityAlignment
P12330 Chlorophyll a-b binding protein 1, chloroplastic1.3e-5651.15Show/hide
Query:  SGASARSASSASSPVTSKIVALFG------KKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFS
        S   AR+A S SS       ALFG      +K A  PKP  S+ SP       WYG DR ++L  G L   E P YL GE PGDYG+D  GLS  PE F+
Subjt:  SGASARSASSASSPVTSKIVALFG------KKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFS

Query:  KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRIINGLNFE--DKLHPG
        K +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I   +++   A +VVL+G  E YRI  G   E  D L+PG
Subjt:  KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRIINGLNFE--DKLHPG

Query:  GPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANN
        G FDPLGLADDP+  A LKVKEIKNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  GPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANN

P12331 Chlorophyll a-b binding protein 2, chloroplastic4.8e-5653.3Show/hide
Query:  APKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGP
        A KPKP+A        + WYG DR ++L  G L   E P YL GE PGDYG+D  GLS  PE F+K +  E+IH+RWAMLGA G + PE   + G   G 
Subjt:  APKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGP

Query:  EAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLG
        EAVWFK G+ +     L+Y GN   I   +++   A +VVL+G  E YRI  G   E  D L+PGG FDPLGLADDP+  A LKVKEIKNGRLAMF+M G
Subjt:  EAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLG

Query:  FYFQAYVTGEGPVENLAKHLSDPFANN
        F+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  FYFQAYVTGEGPVENLAKHLSDPFANN

P15194 Chlorophyll a-b binding protein type 2 member 1B, chloroplastic1.4e-5551.85Show/hide
Query:  ANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL
        A+   + WYGPDR ++L        E P YL GE PGDYG+D  GLS  PE+F+K +  E+IH RWAMLGA G + PE   + G   G EAVWFK GA +
Subjt:  ANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL

Query:  LDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEG
             L+Y GN   +   +++   A +V+L+G  E YRI  G   E  D ++PGG FDPLGLA+DP+  A LKVKEIKNGRLAMF+M GF+ QA VTG+G
Subjt:  LDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEG

Query:  PVENLAKHLSDPFANN
        P+ENLA HL+DP  NN
Subjt:  PVENLAKHLSDPFANN

P27517 Chlorophyll a-b binding protein of LHCII type I, chloroplastic2.6e-5749.37Show/hide
Query:  IVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPE
        ++A  G K     + +   ++       ++YGPDR  FL  G    ++ PEYL GE PGDYG+D  GLS  P+ F++Y+  ELIHARWA+LGA G + PE
Subjt:  IVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPE

Query:  AFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRIING----LNFEDKLHPGGPFDPLGLADDPDQAAILKVKE
          +++      E VWFK GA +     LNY GN   I   ++I  +A +VVL+G AE YR   G    L+  D L+PGGPFDPLGLADDPD  A LKVKE
Subjt:  AFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRIING----LNFEDKLHPGGPFDPLGLADDPDQAAILKVKE

Query:  IKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFAN
        IKNGRLAMF+ LGF+ QA VTG+GPV+NL  HL+DP  N
Subjt:  IKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFAN

Q9XF89 Chlorophyll a-b binding protein CP26, chloroplastic1.4e-13283.69Show/hide
Query:  ASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFG-KKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPF
        ASLGVSEML  PL+F   S  SA  ASSP T K VALF  KKPAPA   K  AVS  +DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV GDYGYDPF
Subjt:  ASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFG-KKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPF

Query:  GLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYRIINGLNFED
        GL KKPE+F+KYQAFELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPINL++AV AEVVL+GGAEYYRI NGL+FED
Subjt:  GLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYRIINGLNFED

Query:  KLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        KLHPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPF NNLLTVI+G AER PTL
Subjt:  KLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 31.5e-5244.81Show/hide
Query:  LGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS
        +  S M  +  +F+G +   + +AS  + S  V +         KPK  + SP       WYG DR  +L        E P YL GE PGDYG+D  GLS
Subjt:  LGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS

Query:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRII-NGL--N
          PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +   +++   A +V+L+G  E YR+  NG    
Subjt:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRII-NGL--N

Query:  FEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANN
         ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  FEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANN

AT1G29930.1 chlorophyll A/B binding protein 18.7e-5344.81Show/hide
Query:  LGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS
        +  S M  +  +F+G + + + +AS  + S  V +         KPK  + SP       WYG DR  +L        E P YL GE PGDYG+D  GLS
Subjt:  LGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS

Query:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRII-NGL--N
          PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +   +++   A +V+L+G  E YR+  NG    
Subjt:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVAAEVVLVGGAEYYRII-NGL--N

Query:  FEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANN
         ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  FEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANN

AT2G05100.1 photosystem II light harvesting complex gene 2.11.0e-5353.59Show/hide
Query:  WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN
        WYGPDR  +L          P YL GE PGDYG+D  GLS  PE F+K +  E+IH+RWAMLGA G   PE  +K G   G EAVWFK G+ +     L+
Subjt:  WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN

Query:  YFGNN--IPINLIVAV-AAEVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAK
        Y GN   I    I+A+ A +VVL+G  E YRI  G   E  D L+PGG FDPL LA+DP+  + LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENL  
Subjt:  YFGNN--IPINLIVAV-AAEVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAK

Query:  HLSDPFANN
        HL+DP ANN
Subjt:  HLSDPFANN

AT3G27690.1 photosystem II light harvesting complex gene 2.31.8e-5353.11Show/hide
Query:  WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN
        WYGPDR  +L          P YL GE PGDYG+D  GLS  PE F+K +  E+IH+RWAMLGA G   PE  +K G   G EAVWFK G+ +     L+
Subjt:  WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN

Query:  YFGNN--IPINLIVAV-AAEVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAK
        Y GN   I    I+A+ A +VVL+G  E YRI  G   E  D L+PGG FDPL LA+DP+  + LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENL  
Subjt:  YFGNN--IPINLIVAV-AAEVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAK

Query:  HLSDPFANN
        H++DP ANN
Subjt:  HLSDPFANN

AT4G10340.1 light harvesting complex of photosystem II 51.0e-13383.69Show/hide
Query:  ASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFG-KKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPF
        ASLGVSEML  PL+F   S  SA  ASSP T K VALF  KKPAPA   K  AVS  +DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV GDYGYDPF
Subjt:  ASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFG-KKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPF

Query:  GLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYRIINGLNFED
        GL KKPE+F+KYQAFELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPINL++AV AEVVL+GGAEYYRI NGL+FED
Subjt:  GLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYRIINGLNFED

Query:  KLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL
        KLHPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPF NNLLTVI+G AER PTL
Subjt:  KLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCTTGGCAGCCTCCACCGCCGCCGCCTCCCTCGGTGTCTCTGAAATGCTGAGAAATCCCCTCAGCTTCTCCGGCGCCTCCGCCAGGTCAGCTTCCTCTGCTTC
TAGCCCGGTCACCTCCAAGATCGTGGCGCTTTTCGGGAAGAAGCCAGCCCCCGCACCCAAGCCCAAGCCCTCCGCTGTCTCTCCAGCCAATGACGAGCTCGCCAAGTGGT
ATGGTCCCGACAGGAGGATTTTCCTCCCCGACGGGTTATTGGACCGATCCGAGATCCCCGAATACCTGAACGGAGAAGTCCCCGGAGACTACGGTTACGACCCCTTCGGA
CTCAGCAAGAAACCAGAGGACTTCAGCAAATACCAAGCATTTGAGTTGATCCACGCACGATGGGCCATGCTTGGAGCTGCTGGGTTCATCATCCCTGAGGCCTTCAACAA
ATTCGGTGCCAACTGCGGCCCTGAGGCTGTGTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGAAACACATTGAATTACTTTGGAAACAACATTCCGATCAACCTCATTG
TCGCGGTCGCTGCAGAGGTTGTTCTTGTCGGTGGTGCCGAGTACTACAGAATCATCAATGGCTTGAACTTTGAGGACAAGCTCCACCCGGGCGGTCCGTTCGACCCGTTG
GGGCTGGCAGACGACCCGGACCAGGCGGCGATCTTGAAGGTGAAGGAGATCAAGAATGGAAGACTGGCAATGTTTGCAATGCTGGGGTTTTACTTCCAGGCCTACGTGAC
CGGAGAAGGGCCGGTGGAGAATTTGGCGAAGCATTTGAGCGATCCTTTTGCAAACAATTTGCTCACAGTCATTTCTGGGAATGCAGAGAGAGTTCCAACTCTTTGA
mRNA sequenceShow/hide mRNA sequence
CCACCTAATCTTCACCATTTACAACATTTTTGCATCCATTCATTCTTCCTTGCTCTCACCTTCTCACTCTCTCCGCCCATGGCCTCCTTGGCAGCCTCCACCGCCGCCGC
CTCCCTCGGTGTCTCTGAAATGCTGAGAAATCCCCTCAGCTTCTCCGGCGCCTCCGCCAGGTCAGCTTCCTCTGCTTCTAGCCCGGTCACCTCCAAGATCGTGGCGCTTT
TCGGGAAGAAGCCAGCCCCCGCACCCAAGCCCAAGCCCTCCGCTGTCTCTCCAGCCAATGACGAGCTCGCCAAGTGGTATGGTCCCGACAGGAGGATTTTCCTCCCCGAC
GGGTTATTGGACCGATCCGAGATCCCCGAATACCTGAACGGAGAAGTCCCCGGAGACTACGGTTACGACCCCTTCGGACTCAGCAAGAAACCAGAGGACTTCAGCAAATA
CCAAGCATTTGAGTTGATCCACGCACGATGGGCCATGCTTGGAGCTGCTGGGTTCATCATCCCTGAGGCCTTCAACAAATTCGGTGCCAACTGCGGCCCTGAGGCTGTGT
GGTTCAAGACTGGAGCTCTGCTTCTTGATGGAAACACATTGAATTACTTTGGAAACAACATTCCGATCAACCTCATTGTCGCGGTCGCTGCAGAGGTTGTTCTTGTCGGT
GGTGCCGAGTACTACAGAATCATCAATGGCTTGAACTTTGAGGACAAGCTCCACCCGGGCGGTCCGTTCGACCCGTTGGGGCTGGCAGACGACCCGGACCAGGCGGCGAT
CTTGAAGGTGAAGGAGATCAAGAATGGAAGACTGGCAATGTTTGCAATGCTGGGGTTTTACTTCCAGGCCTACGTGACCGGAGAAGGGCCGGTGGAGAATTTGGCGAAGC
ATTTGAGCGATCCTTTTGCAAACAATTTGCTCACAGTCATTTCTGGGAATGCAGAGAGAGTTCCAACTCTTTGAACACTGCAAGTTTGAGTATTGAATGGAAGTGTTGAA
TGTGTTTGTAAATTTGTATTGAGACTATTTGTAGCCTCTGACCACTCACTCTCAGTGCATTTAAAAAGAGCTATGAACAAGAGTTTGATATCAAATTTTCTGTCAACTTG
TGTGTGTAAACTGTGGGTTGGTGCATAATTTCTCTATTTTGTATGCAATTCAACCTTAATATATATATTTAAGTAGCCTATGTATTTTTCATGATTCTTAAATTAGTCGT
ATAAAGTTGATGTTTAATGAAATCAATTGAATAATAACCATATTTTTC
Protein sequenceShow/hide protein sequence
MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVALFGKKPAPAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG
LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPL
GLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL