; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G009360 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G009360
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPeptide chain release factor 1
Genome locationCmo_Chr01:5419814..5425029
RNA-Seq ExpressionCmoCh01G009360
SyntenyCmoCh01G009360
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006415 - translational termination (biological process)
GO:0003747 - translation release factor activity (molecular function)
GO:0042393 - histone binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000352 - Peptide chain release factor class I


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607552.1 hypothetical protein SDJN03_00894, partial [Cucurbita argyrosperma subsp. sororia]1.3e-12899.16Show/hide
Query:  MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVR
        MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRS CSSSSANS+WKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVR
Subjt:  MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVR

Query:  LKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTA
        LKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTA
Subjt:  LKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTA

Query:  KYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
        KYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
Subjt:  KYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK

XP_022932469.1 uncharacterized protein LOC111438876 [Cucurbita moschata]2.6e-129100Show/hide
Query:  MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVR
        MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVR
Subjt:  MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVR

Query:  LKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTA
        LKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTA
Subjt:  LKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTA

Query:  KYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
        KYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
Subjt:  KYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK

XP_022973451.1 uncharacterized protein LOC111471993 [Cucurbita maxima]2.6e-12697.89Show/hide
Query:  MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVR
        MAT NMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRS CSSSSA SVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVR
Subjt:  MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVR

Query:  LKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTA
        LKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPV+LEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQ+LLDLIYTLDGSISDTA
Subjt:  LKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTA

Query:  KYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
        KYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
Subjt:  KYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK

XP_023523846.1 uncharacterized protein LOC111787964 [Cucurbita pepo subsp. pepo]1.3e-12899.16Show/hide
Query:  MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVR
        MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRS CSSSSANSVWKGKEYL+LSDEELMRQCEMDTFKASGPGGQHRNKRESAVR
Subjt:  MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVR

Query:  LKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTA
        LKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTA
Subjt:  LKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTA

Query:  KYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
        KYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
Subjt:  KYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK

XP_038891024.1 peptide chain release factor 1 [Benincasa hispida]6.3e-11287.76Show/hide
Query:  MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVR
        MA ANML  SAKIL  P+PIAS GRW R GCTF  H FEGSFF NSL S CSS++ANSVW GKEYL+LSDEELM+QCEMDTFKASGPGGQHRNKRESAVR
Subjt:  MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVR

Query:  LKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTA
        LKHIPTGITAQAVEDRSQHKNRASALARLRA LALKVRNPVDLEDYSPPPELLQILPLKSTIRPP CGPQIGP NSKFLPGMQALLDLI TLDGS+SDTA
Subjt:  LKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTA

Query:  KYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
        K +GLTTGA+SRLILSDD+LRMAVNDIRISKGMKPLK
Subjt:  KYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK

TrEMBL top hitse value%identityAlignment
A0A0A0KUM8 RF_PROK_I domain-containing protein2.8e-10583.75Show/hide
Query:  MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQ--FEGS-FFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRES
        MA ANMLW SAKIL  P PIASN RW R   TFR+    FEGS FF NSLR  CSSS+ANSV  GK+YL+LSDEELM+QCEM TFKASGPGGQHRNKRES
Subjt:  MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQ--FEGS-FFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRES

Query:  AVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSIS
        AVRLKHIPTGI AQAVEDRSQHKNR+SALARLRA LALKVRNPVDLEDYSPPPELLQILPLKST+RPP CGPQIGPNNSKFLPGMQALLDLI TLDGS+S
Subjt:  AVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSIS

Query:  DTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
        DTAK +GLTTGA+SRLILSDD+LRMAVNDIR+SKG+KPLK
Subjt:  DTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK

A0A1S3CAA2 uncharacterized protein LOC103498609 isoform X14.3e-10684.58Show/hide
Query:  MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRI--HQFEGS-FFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRES
        MA ANMLW SAKIL  P PIASN RW R G  FR   H FEGS FF NSLR  CSSS+ANSV  GKEYL+LSDEELM+QCEM TFKASGPGGQHRNKRES
Subjt:  MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRI--HQFEGS-FFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRES

Query:  AVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSIS
        AVRLKHIPTGI AQAVEDRSQHKNR+SALARLRA LALKVRNPVDLEDYSPPPELLQILP KST+RPP CGPQIGPNNSKFLPGMQALLDLI TLDGS+S
Subjt:  AVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSIS

Query:  DTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
        DTAK +GLTTGA+SRLILSDD+LRMAVNDIR+SKGMKPLK
Subjt:  DTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK

A0A5A7T8S5 Peptide chain release factor 14.3e-10684.58Show/hide
Query:  MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRI--HQFEGS-FFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRES
        MA ANMLW SAKIL  P PIASN RW R G  FR   H FEGS FF NSLR  CSSS+ANSV  GKEYL+LSDEELM+QCEM TFKASGPGGQHRNKRES
Subjt:  MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRI--HQFEGS-FFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRES

Query:  AVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSIS
        AVRLKHIPTGI AQAVEDRSQHKNR+SALARLRA LALKVRNPVDLEDYSPPPELLQILP KST+RPP CGPQIGPNNSKFLPGMQALLDLI TLDGS+S
Subjt:  AVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSIS

Query:  DTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
        DTAK +GLTTGA+SRLILSDD+LRMAVNDIR+SKGMKPLK
Subjt:  DTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK

A0A6J1EX22 uncharacterized protein LOC1114388761.2e-129100Show/hide
Query:  MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVR
        MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVR
Subjt:  MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVR

Query:  LKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTA
        LKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTA
Subjt:  LKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTA

Query:  KYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
        KYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
Subjt:  KYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK

A0A6J1I8P1 uncharacterized protein LOC1114719931.3e-12697.89Show/hide
Query:  MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVR
        MAT NMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRS CSSSSA SVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVR
Subjt:  MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVR

Query:  LKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTA
        LKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPV+LEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQ+LLDLIYTLDGSISDTA
Subjt:  LKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTA

Query:  KYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
        KYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
Subjt:  KYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK

SwissProt top hitse value%identityAlignment
A5WFG1 Peptide chain release factor 11.2e-1255.88Show/hide
Query:  MDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQL-ALKVRNPVDLED
        MDTF++SG GGQH N  +SAVRL HIPTG+ A+  ++RSQHKNRA A+  L A++   KV+  VD  D
Subjt:  MDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQL-ALKVRNPVDLED

A6Q582 Peptide chain release factor 23.1e-1337.8Show/hide
Query:  KSAKILSIPVPIASNGRWGRIGCTFRIHQFE--GSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPT
        + A I  +   I     +G +     IH+      F SN+ R T  +S   S     +  I+ +++ +R   +DT++ASG GGQH NK +SA+R+ HIPT
Subjt:  KSAKILSIPVPIASNGRWGRIGCTFRIHQFE--GSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPT

Query:  GITAQAVEDRSQHKNRASALARLRAQL
        GI  Q   DRSQHKNRA+A+  L+++L
Subjt:  GITAQAVEDRSQHKNRASALARLRAQL

A7ZE19 Peptide chain release factor 27.0e-1357.63Show/hide
Query:  RQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQL
        +  ++DT++ASG GGQH NK ESA+R+ HIPTGI  Q   DRSQHKNRA+A+  L+++L
Subjt:  RQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQL

B1XYX1 Peptide chain release factor 19.1e-1347.44Show/hide
Query:  QCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELL
        +  +DT++ASG GGQH NK +SAVR+ H+PTG+ A+  +DRSQH+N+A ALA L A+L  +VR     +D +    L+
Subjt:  QCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELL

Q30TP0 Peptide chain release factor 21.2e-1237.6Show/hide
Query:  AKILSIPVPIASNGRWGRIGCTFRIHQFE--GSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGI
        A I  + + I+    +G +     IH+      F SN+ R T  SS   S     +  I+ ++   R   +DT+++SG GGQH NK ESA+R+ HI TG+
Subjt:  AKILSIPVPIASNGRWGRIGCTFRIHQFE--GSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGI

Query:  TAQAVEDRSQHKNRASALARLRAQL
          Q   DRSQHKNRA+A+  L+++L
Subjt:  TAQAVEDRSQHKNRASALARLRAQL

Arabidopsis top hitse value%identityAlignment
AT1G33330.1 Class I peptide chain release factor3.9e-6770.27Show/hide
Query:  SSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPEL
        S S  S  +   YL  +DEELM+QC ++TF+ SGPGGQHRNKR+SAVRLKH+PTGI AQAVEDRSQHKNRASAL RLR  LA+KVRN VD+E Y+PPPEL
Subjt:  SSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPEL

Query:  LQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
        LQILP KSTIR    G QIGPNN KF+PGMQALLD+I   DGSI+D+AK +GL+TG +SRLILS D LRMAVN +R +KG+KPLK
Subjt:  LQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK

AT1G56350.1 Peptide chain release factor 25.1e-1145.83Show/hide
Query:  GKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQL
        G   + ++D +L     ++ F++ G GGQH N  +SAVR+ HIPTGITA    +RSQH N+ASA+A L+++L
Subjt:  GKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQL

AT2G47020.1 Peptide chain release factor 13.7e-0950.91Show/hide
Query:  MDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQL
        +DT+++ G GGQH N   SAVR+ H+PTG+     ++RSQH NRA AL  L A+L
Subjt:  MDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRASALARLRAQL

AT5G36170.1 high chlorophyll fluorescent 1096.3e-0933.83Show/hide
Query:  KSAKILSIPVPIASNGRWGRIGCTFRIHQF--EGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELM------RQCEMDTFKASGPGGQHRNKRESAVR
        + A I S  + I     +G I      H+   +  F S  LR T  S        G E + L  EE +         ++   +A G GGQ+ NK E+AVR
Subjt:  KSAKILSIPVPIASNGRWGRIGCTFRIHQF--EGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELM------RQCEMDTFKASGPGGQHRNKRESAVR

Query:  LKHIPTGITAQAVEDRSQHKNRASALARLRAQL
        + HIPTG+  +  E+RSQ  N+  AL RL+A+L
Subjt:  LKHIPTGITAQAVEDRSQHKNRASALARLRAQL

AT5G36170.2 high chlorophyll fluorescent 1096.3e-0933.83Show/hide
Query:  KSAKILSIPVPIASNGRWGRIGCTFRIHQF--EGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELM------RQCEMDTFKASGPGGQHRNKRESAVR
        + A I S  + I     +G I      H+   +  F S  LR T  S        G E + L  EE +         ++   +A G GGQ+ NK E+AVR
Subjt:  KSAKILSIPVPIASNGRWGRIGCTFRIHQF--EGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELM------RQCEMDTFKASGPGGQHRNKRESAVR

Query:  LKHIPTGITAQAVEDRSQHKNRASALARLRAQL
        + HIPTG+  +  E+RSQ  N+  AL RL+A+L
Subjt:  LKHIPTGITAQAVEDRSQHKNRASALARLRAQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACCGCAAATATGCTCTGGAAATCCGCCAAGATTCTTAGTATTCCTGTTCCAATAGCAAGCAACGGTAGATGGGGAAGGATTGGCTGTACATTTCGAATTCACCA
ATTCGAGGGCTCTTTCTTCTCCAACTCACTGCGTTCCACTTGCAGCTCTAGCAGTGCAAATTCAGTATGGAAAGGAAAAGAGTATTTGATTTTGTCCGACGAAGAGCTGA
TGAGACAGTGCGAAATGGACACGTTTAAGGCCTCAGGTCCCGGCGGTCAGCACCGCAACAAGCGCGAGTCCGCTGTCCGTTTGAAGCACATTCCCACTGGTATCACTGCT
CAGGCTGTCGAGGATCGATCACAGCATAAGAATCGAGCGAGTGCTTTAGCTCGCCTACGCGCTCAATTGGCCCTAAAAGTCAGGAACCCTGTGGATCTTGAAGATTATTC
GCCTCCTCCAGAGCTTCTCCAAATTCTCCCTCTGAAGTCCACTATCAGGCCACCGGGATGTGGCCCTCAAATTGGTCCTAACAATTCTAAATTTCTTCCGGGCATGCAAG
CTTTATTGGATCTAATTTACACACTTGATGGTTCTATATCAGACACAGCTAAGTATATAGGGTTAACCACTGGTGCTGTATCAAGGTTAATCCTATCCGACGATTCTCTT
AGAATGGCTGTAAATGATATCAGGATATCCAAGGGTATGAAGCCACTGAAGTAG
mRNA sequenceShow/hide mRNA sequence
TTATTGTCTCTCAATAAATTTCAACCTTTGGGAGTTGGGGCCGATTTCTAACTATTTATGTACTAATTTCCGTTATCAGGGTGTTTCTCGCCCAAATTCTGCAGTTCTTT
CATTTTGATCGAAAACCCACACAGGAGCTGCAACAGGCAAAATCGGGAGTCCATAGCAGCATATCTCATAGCAGGAAGCCATGATTTTCCATAACAATGACTTCAAGCCA
CAACTTGTCCATAACCATGATTAAAAACGACCCAATTTTGAAAACCACACAAAACCCAATAGGAGAAATTCGTTTTCTGAATTGCGAAAATGGCAACCGCAAATATGCTC
TGGAAATCCGCCAAGATTCTTAGTATTCCTGTTCCAATAGCAAGCAACGGTAGATGGGGAAGGATTGGCTGTACATTTCGAATTCACCAATTCGAGGGCTCTTTCTTCTC
CAACTCACTGCGTTCCACTTGCAGCTCTAGCAGTGCAAATTCAGTATGGAAAGGAAAAGAGTATTTGATTTTGTCCGACGAAGAGCTGATGAGACAGTGCGAAATGGACA
CGTTTAAGGCCTCAGGTCCCGGCGGTCAGCACCGCAACAAGCGCGAGTCCGCTGTCCGTTTGAAGCACATTCCCACTGGTATCACTGCTCAGGCTGTCGAGGATCGATCA
CAGCATAAGAATCGAGCGAGTGCTTTAGCTCGCCTACGCGCTCAATTGGCCCTAAAAGTCAGGAACCCTGTGGATCTTGAAGATTATTCGCCTCCTCCAGAGCTTCTCCA
AATTCTCCCTCTGAAGTCCACTATCAGGCCACCGGGATGTGGCCCTCAAATTGGTCCTAACAATTCTAAATTTCTTCCGGGCATGCAAGCTTTATTGGATCTAATTTACA
CACTTGATGGTTCTATATCAGACACAGCTAAGTATATAGGGTTAACCACTGGTGCTGTATCAAGGTTAATCCTATCCGACGATTCTCTTAGAATGGCTGTAAATGATATC
AGGATATCCAAGGGTATGAAGCCACTGAAGTAGAAAAGGGGAAGCTCAAGGACTGTATCGGGTGGTGGGTACTCCATGAAGCAACTTCATTTCCGGAGATTCATCGTTGA
GTTGAGTTAAAAAGATGTAAGTTTCTTGTATTTATATTGATATTAGATGCGATTTGATGATAACGAGGAAATATGAAATTTTTATGAGAGGACAAAGATGGTGTATGTAA
TTAAAGCATCAATCAATCTCTGCCGAAACACATTCCTATTACTACACACTATCTTAAAGTGTGGAGAAAACTCCTGTTTCTTGCAAATCTCAAGTTTTTGGTGCTTTCCA
GACATGGAACATTCATTTTTTTTACCAAGTTTATAGATTATTATCCTGAACATTCAATTCA
Protein sequenceShow/hide protein sequence
MATANMLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGSFFSNSLRSTCSSSSANSVWKGKEYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITA
QAVEDRSQHKNRASALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSL
RMAVNDIRISKGMKPLK