; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G009630 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G009630
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein of unknown function (DUF3511)
Genome locationCmo_Chr01:6099615..6099878
RNA-Seq ExpressionCmoCh01G009630
SyntenyCmoCh01G009630
Gene Ontology termsNA
InterPro domainsIPR021899 - Protein of unknown function DUF3511


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039168.1 Mediator of RNA polymerase II transcription subunit 8 [Cucumis melo var. makuwa]8.2e-3388.51Show/hide
Query:  MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        MEKSK+FPKYSSSTSGEFGF+T+SNSYNFNG   K +GFS+SADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSD RYGL
Subjt:  MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

KAG6607585.1 hypothetical protein SDJN03_00927, partial [Cucurbita argyrosperma subsp. sororia]2.9e-38100Show/hide
Query:  MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
Subjt:  MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

KAG7037209.1 hypothetical protein SDJN02_00832, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3798.85Show/hide
Query:  MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        MEK KTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
Subjt:  MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

KGN45893.1 hypothetical protein Csa_005289 [Cucumis sativus]6.3e-3388.51Show/hide
Query:  MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        MEKSK+FPKYSSSTSGEFGF+T+SNSYNFNG   K +GFS+SADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSD RYGL
Subjt:  MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

XP_022930185.1 uncharacterized protein LOC111436683 [Cucurbita moschata]4.5e-3185.06Show/hide
Query:  MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        MEKSK+FPKYSSS SGEF F+T+SNSYNFNG   K +GFS+S DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSD RYGL
Subjt:  MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

TrEMBL top hitse value%identityAlignment
A0A0A0K8Y3 Uncharacterized protein3.0e-3388.51Show/hide
Query:  MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        MEKSK+FPKYSSSTSGEFGF+T+SNSYNFNG   K +GFS+SADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSD RYGL
Subjt:  MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

A0A5A7T8F8 Mediator of RNA polymerase II transcription subunit 84.0e-3388.51Show/hide
Query:  MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        MEKSK+FPKYSSSTSGEFGF+T+SNSYNFNG   K +GFS+SADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSD RYGL
Subjt:  MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

A0A6J1EWA0 uncharacterized protein LOC1114366832.2e-3185.06Show/hide
Query:  MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        MEKSK+FPKYSSS SGEF F+T+SNSYNFNG   K +GFS+S DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSD RYGL
Subjt:  MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

A0A6J1ICY9 uncharacterized protein LOC1114726831.2e-2982.76Show/hide
Query:  MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        MEKSK+FPKYSSS SGEF F+T+SNSYNFNG     +GFS+S DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSD RY L
Subjt:  MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

A0A6N2KPE9 Uncharacterized protein3.8e-2875.86Show/hide
Query:  MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        MEKSK+FP+YSSS SGEFGFE QS+SYNFNG  +KG+GFS+S+DPEL+RK+RIASYNVF ME K+KSS +NSFKWIK+KFSD RYG+
Subjt:  MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72720.1 Protein of unknown function (DUF3511)1.5e-0841.46Show/hide
Query:  YSSSTSGEFGFET----QSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        YS+ST   +   T     SN+ +   +  K  GF    + E+QRK+R+ASYNV+ +E +VK S+K SFKW K   S+  YGL
Subjt:  YSSSTSGEFGFET----QSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

AT2G19460.1 Protein of unknown function (DUF3511)1.8e-0650Show/hide
Query:  EKGSGFSSSA----DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTK
        +KG   SSS+    DP+LQRK+R+ SY  + +E K+K S + SFKWIK K
Subjt:  EKGSGFSSSA----DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTK

AT3G13910.1 Protein of unknown function (DUF3511)4.5e-0537.33Show/hide
Query:  SSSTSGEFGFETQSNSYNFN-------GSAEKGSGFS-SSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIK
        S S     G ++Q+N Y           +A++ +  S S +DPE +RKRR+A Y V+++E K+K S++ SFKW K
Subjt:  SSSTSGEFGFETQSNSYNFN-------GSAEKGSGFS-SSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIK

AT4G09890.1 Protein of unknown function (DUF3511)6.3e-1553.01Show/hide
Query:  MEKSKTFPKYSSS-TSGEFGF-ETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFS
        M+ SK++ +YSSS ++ EFG+ + +SNSYNFNG          + DPE++RK+R+ASYN+F  E K+KS++KNSFKWIK KFS
Subjt:  MEKSKTFPKYSSS-TSGEFGF-ETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFS

AT5G11970.1 Protein of unknown function (DUF3511)4.8e-0737.65Show/hide
Query:  YSSSTSGEF-----GFETQSNSYNFNGSAEKGSGFSSS---ADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYG
        Y  +  G+F      + T+ N+  ++   EK    S S    DPELQRK+R+ASY ++ +E KVK S +NSF+W+K +++   YG
Subjt:  YSSSTSGEF-----GFETQSNSYNFNGSAEKGSGFSSS---ADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAGCAAAACATTCCCCAAGTACTCGTCCTCCACTTCGGGCGAGTTCGGTTTCGAAACCCAGTCTAACTCGTACAATTTCAACGGCTCGGCTGAGAAGGGGAG
CGGATTTTCGTCCTCTGCCGATCCCGAGCTTCAAAGGAAGAGAAGGATCGCCTCTTATAATGTTTTCAATATGGAAAACAAAGTGAAGTCCAGTGTAAAGAACAGCTTCA
AATGGATCAAAACCAAGTTTAGTGACCGTCGCTACGGTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAGCAAAACATTCCCCAAGTACTCGTCCTCCACTTCGGGCGAGTTCGGTTTCGAAACCCAGTCTAACTCGTACAATTTCAACGGCTCGGCTGAGAAGGGGAG
CGGATTTTCGTCCTCTGCCGATCCCGAGCTTCAAAGGAAGAGAAGGATCGCCTCTTATAATGTTTTCAATATGGAAAACAAAGTGAAGTCCAGTGTAAAGAACAGCTTCA
AATGGATCAAAACCAAGTTTAGTGACCGTCGCTACGGTTTGTGA
Protein sequenceShow/hide protein sequence
MEKSKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL