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CmoCh01G009680 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G009680
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr01:6182781..6183260
RNA-Seq ExpressionCmoCh01G009680
SyntenyCmoCh01G009680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607589.1 hypothetical protein SDJN03_00931, partial [Cucurbita argyrosperma subsp. sororia]1.4e-7596.86Show/hide
Query:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESDEETDAAAAEKMDVLWENLNEDLSRNRRS
        MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESDEET+AAAAEKMDVLWENLNEDLSRNRRS
Subjt:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESDEETDAAAAEKMDVLWENLNEDLSRNRRS

Query:  RLMKSAEIESVEIADLDPSQTSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA
        RLMKSAEIESVEI +L PS+TSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA
Subjt:  RLMKSAEIESVEIADLDPSQTSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA

KAG7037212.1 hypothetical protein SDJN02_00835, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-7596.23Show/hide
Query:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESDEETDAAAAEKMDVLWENLNEDLSRNRRS
        MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLE+DEET+AAAAEKMDVLWENLNEDLSRNRRS
Subjt:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESDEETDAAAAEKMDVLWENLNEDLSRNRRS

Query:  RLMKSAEIESVEIADLDPSQTSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA
        RLMKSAEIESVEI +L PS+TSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA
Subjt:  RLMKSAEIESVEIADLDPSQTSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA

XP_022932064.1 uncharacterized protein LOC111438391 [Cucurbita moschata]3.1e-78100Show/hide
Query:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESDEETDAAAAEKMDVLWENLNEDLSRNRRS
        MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESDEETDAAAAEKMDVLWENLNEDLSRNRRS
Subjt:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESDEETDAAAAEKMDVLWENLNEDLSRNRRS

Query:  RLMKSAEIESVEIADLDPSQTSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA
        RLMKSAEIESVEIADLDPSQTSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA
Subjt:  RLMKSAEIESVEIADLDPSQTSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA

XP_022972924.1 uncharacterized protein LOC111471431 [Cucurbita maxima]8.4e-6889.51Show/hide
Query:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESDEETD----AAAAEKMDVLWENLNEDLSR
        MAVEDDF+FPTAFDSFTRCSIDSPPLWR SPAASPISDSNFRDTTAHT+R DRFA VTFTSSL RRR LESDEE +    AAAAEKMDVLWENLNEDLSR
Subjt:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESDEETD----AAAAEKMDVLWENLNEDLSR

Query:  NRRSRLMKSAEIESVEIADLDPSQTSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRS
        NRRSRLMKSAEIESVEIA+L+PS+TSRSTATRRKKTTTGIVKVLKKLFLMQNTSR+NLETRS
Subjt:  NRRSRLMKSAEIESVEIADLDPSQTSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRS

XP_023521937.1 uncharacterized protein LOC111785778 [Cucurbita pepo subsp. pepo]1.0e-7394.34Show/hide
Query:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESDEETDAAAAEKMDVLWENLNEDLSRNRRS
        MAVEDDFSFPT FDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRR+L SDEET+AAAAEKMDVLWENLNEDLSRNRRS
Subjt:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESDEETDAAAAEKMDVLWENLNEDLSRNRRS

Query:  RLMKSAEIESVEIADLDPSQTSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA
        RLMKSAEIESVEI +LDPS+ SRSTATRRKKTTTGIVKVLKKLFL+QNTSRRNLETRSA
Subjt:  RLMKSAEIESVEIADLDPSQTSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA

TrEMBL top hitse value%identityAlignment
A0A5A7V6B2 Uncharacterized protein2.2e-3757.22Show/hide
Query:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPIS-------DSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKL-------ESDEETDAAAAEKMDVL
        MAVEDDFSFPTA + F RC IDSPPLWR SP+ASPIS       D NFRDT +  + ++RF + +F     RRR L       E +EE + A AEKMDVL
Subjt:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPIS-------DSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKL-------ESDEETDAAAAEKMDVL

Query:  WENLNEDLSRNRRSRLMKSAEIESVEI-------ADLDPSQTSRSTATRRKKT-TTGIVKVLKKLFLMQNTSRRNLETRS
        WEN NE+LSR+RRSRLMK+AE+E  EI       A+L+  +TS + ATRRK T  T  VKVLKKLFLM + SRRNL+TRS
Subjt:  WENLNEDLSRNRRSRLMKSAEIESVEI-------ADLDPSQTSRSTATRRKKT-TTGIVKVLKKLFLMQNTSRRNLETRS

A0A6J1EVZ5 uncharacterized protein LOC1114383911.5e-78100Show/hide
Query:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESDEETDAAAAEKMDVLWENLNEDLSRNRRS
        MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESDEETDAAAAEKMDVLWENLNEDLSRNRRS
Subjt:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESDEETDAAAAEKMDVLWENLNEDLSRNRRS

Query:  RLMKSAEIESVEIADLDPSQTSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA
        RLMKSAEIESVEIADLDPSQTSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA
Subjt:  RLMKSAEIESVEIADLDPSQTSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA

A0A6J1EX19 uncharacterized protein LOC1114390323.0e-3957.54Show/hide
Query:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPI-------SDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESD------EETDAAAAEKMDVLW
        MAVEDDFSFPTA + ++RC IDSPPLWR SP ASPI       S+ +FRD      ++DRFA+V F++SL RRR+  SD      EE +  AAEKMDVLW
Subjt:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPI-------SDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESD------EETDAAAAEKMDVLW

Query:  ENLNEDLSRNRRSRLMKSAEIESVEI-------ADLDPSQTSRSTATRRKKT-TTGIVKVLKKLFLMQNTSRRNLETRS
        EN NE+LSR+ RSRLMK+AE+E +EI       A+L+ S+TS + ATRRK T  T  VK LKKLFL+ N SRRNL+TRS
Subjt:  ENLNEDLSRNRRSRLMKSAEIESVEI-------ADLDPSQTSRSTATRRKKT-TTGIVKVLKKLFLMQNTSRRNLETRS

A0A6J1ID03 uncharacterized protein LOC1114714314.1e-6889.51Show/hide
Query:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESDEETD----AAAAEKMDVLWENLNEDLSR
        MAVEDDF+FPTAFDSFTRCSIDSPPLWR SPAASPISDSNFRDTTAHT+R DRFA VTFTSSL RRR LESDEE +    AAAAEKMDVLWENLNEDLSR
Subjt:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESDEETD----AAAAEKMDVLWENLNEDLSR

Query:  NRRSRLMKSAEIESVEIADLDPSQTSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRS
        NRRSRLMKSAEIESVEIA+L+PS+TSRSTATRRKKTTTGIVKVLKKLFLMQNTSR+NLETRS
Subjt:  NRRSRLMKSAEIESVEIADLDPSQTSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRS

A0A6J1INL4 uncharacterized protein LOC1114771611.5e-3857.3Show/hide
Query:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPI-------SDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESD-----EETDAAAAEKMDVLWE
        MAVEDDFSFPTA + ++RC IDSPPLWR SPAASPI       S+ +FRD      ++D FA+V F++SL RRR+  SD     EE +  AAEKMDVLWE
Subjt:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPI-------SDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESD-----EETDAAAAEKMDVLWE

Query:  NLNEDLSRNRRSRLMKSAEIESVEI-------ADLDPSQTSRSTATRRKKT-TTGIVKVLKKLFLMQNTSRRNLETRS
        N NE+LSR+ RSRLMK+AE+E +EI        +L+ S+TS + ATRRK T  T  VK LKKLFL+ N SRRNL+TRS
Subjt:  NLNEDLSRNRRSRLMKSAEIESVEI-------ADLDPSQTSRSTATRRKKT-TTGIVKVLKKLFLMQNTSRRNLETRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G71910.1 unknown protein8.2e-0529.7Show/hide
Query:  DDFSFPT--AFDSFTRCSIDSPPLWRASPAAS-PISDSNFRDTTAHTDRT-DRFAAVTFTSSLHRRRKLESDEETDAAAAEKMDVLWENLNEDL-SRNRR
        ++F+FP+  + DS     +DSPPLW+ SP  S    D +F        +  D     +F+    R R ++  EE      EKMD+LWE+LNE+L  R++ 
Subjt:  DDFSFPT--AFDSFTRCSIDSPPLWRASPAAS-PISDSNFRDTTAHTDRT-DRFAAVTFTSSLHRRRKLESDEETDAAAAEKMDVLWENLNEDL-SRNRR

Query:  SRLMKSAEIESVEIADLDPSQTS--------RSTATRRKKTTTGI---VKVLKKLFLMQNTSRRN
         R++   +    + A L P ++S        + +   +KKT   +   ++VLKKL +++++S+R+
Subjt:  SRLMKSAEIESVEIADLDPSQTS--------RSTATRRKKTTTGI---VKVLKKLFLMQNTSRRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTGAAGATGACTTCAGTTTCCCCACCGCCTTCGACTCCTTCACCCGCTGCAGCATCGATTCCCCGCCTCTCTGGCGCGCCTCTCCCGCCGCATCTCCCATTTC
CGATTCCAACTTCAGAGACACCACGGCCCATACTGACAGGACCGATCGCTTCGCCGCCGTCACATTTACGTCCTCCTTGCACAGGAGGAGGAAACTCGAGAGCGACGAGG
AGACGGATGCCGCGGCGGCGGAGAAGATGGATGTGCTCTGGGAGAATCTCAACGAGGACTTATCGAGGAATCGAAGATCGAGGTTGATGAAATCGGCGGAGATTGAATCG
GTTGAGATAGCGGATTTGGATCCGTCGCAAACGTCGAGGAGCACGGCGACGAGGAGGAAGAAGACGACGACGGGGATTGTTAAGGTTTTGAAGAAGCTTTTCTTGATGCA
GAACACTTCCCGCCGGAATCTGGAAACTCGATCAGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTGAAGATGACTTCAGTTTCCCCACCGCCTTCGACTCCTTCACCCGCTGCAGCATCGATTCCCCGCCTCTCTGGCGCGCCTCTCCCGCCGCATCTCCCATTTC
CGATTCCAACTTCAGAGACACCACGGCCCATACTGACAGGACCGATCGCTTCGCCGCCGTCACATTTACGTCCTCCTTGCACAGGAGGAGGAAACTCGAGAGCGACGAGG
AGACGGATGCCGCGGCGGCGGAGAAGATGGATGTGCTCTGGGAGAATCTCAACGAGGACTTATCGAGGAATCGAAGATCGAGGTTGATGAAATCGGCGGAGATTGAATCG
GTTGAGATAGCGGATTTGGATCCGTCGCAAACGTCGAGGAGCACGGCGACGAGGAGGAAGAAGACGACGACGGGGATTGTTAAGGTTTTGAAGAAGCTTTTCTTGATGCA
GAACACTTCCCGCCGGAATCTGGAAACTCGATCAGCCTGA
Protein sequenceShow/hide protein sequence
MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLESDEETDAAAAEKMDVLWENLNEDLSRNRRSRLMKSAEIES
VEIADLDPSQTSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA