| GenBank top hits | e value | %identity | Alignment |
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| XP_008454536.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo] | 1.1e-74 | 98.66 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| XP_011653886.2 probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis sativus] | 5.6e-74 | 97.32 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKA++GGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| XP_022926288.1 sm-like protein LSM4 isoform X1 [Cucurbita moschata] | 2.7e-76 | 100 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| XP_022975088.1 sm-like protein LSM4 isoform X1 [Cucurbita maxima] | 4.3e-74 | 97.32 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+R DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRP+KGMGRGFDDGAKAASGGRGKGG GGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| XP_038896461.1 uncharacterized protein LOC120084721 [Benincasa hispida] | 3.9e-75 | 98.66 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDD AKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A1S3BYD6 U6 snRNA-associated Sm-like protein LSm4 | 5.5e-75 | 98.66 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| A0A6J1CRC5 U6 snRNA-associated Sm-like protein LSm4 | 3.6e-74 | 96.64 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKP G+GRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDG+KA+SGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| A0A6J1EHL8 U6 snRNA-associated Sm-like protein LSm4 | 1.3e-76 | 100 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| A0A6J1ID83 U6 snRNA-associated Sm-like protein LSm4 | 2.1e-74 | 97.32 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+R DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRP+KGMGRGFDDGAKAASGGRGKGG GGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| A0A6J1J2N4 U6 snRNA-associated Sm-like protein LSm4 | 1.3e-76 | 100 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| F4K4E3 Sm-like protein LSM4 | 5.1e-54 | 78.52 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE KTR DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
G +DG GA+ GRG+G GK G NR GRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| Q43582 Probable U6 snRNA-associated Sm-like protein LSm4 | 9.0e-59 | 82 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY+RGNTIKYLRVPDEVIDKVQEE K+R DRKPPGVGR R R
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
Query: -GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GR+D GR KG+GRG DDG + GRGKGGP K G R GGRGRG
Subjt: -GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| Q9LGE6 Probable U6 snRNA-associated Sm-like protein LSm4 | 1.0e-57 | 82.12 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KTRADRKPPGVGRGRG
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECYIRGNTIKYLRVPDEVIDKVQEET K+R+DR+PPGVGRGRG
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KTRADRKPPGVGRGRG
Query: RGR-EDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
RG PGGR G+GRG DDG GGRG+GG GGK G + GGRGRG
Subjt: RGR-EDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| Q9QXA5 U6 snRNA-associated Sm-like protein LSm4 | 2.1e-39 | 64.29 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYIRG+TIKYLR+PDE+ID V+EE GRGRG
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRG-FDDGAKAASGGRGKGGPGGKPG
++ GR G GRG F + G G+G P KPG
Subjt: GREDGPGGRPAKGMGRG-FDDGAKAASGGRGKGGPGGKPG
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| Q9ZRU9 Probable U6 snRNA-associated Sm-like protein LSm4 | 1.1e-56 | 80.67 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELK+GETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP+CYIRGNTIKYLRVPDEVIDKVQEETK+RADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRG-FDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
GRE+G G R +G GR AKA RG+G GK G GGRGRG
Subjt: GREDGPGGRPAKGMGRG-FDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 9.4e-11 | 33.82 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDK---VQEETKTRADRKPPGVGRGR
+P+ LL A GH + VELK+GE Y G ++ C+ N L ++ T+KDG + ++ +IRG+ ++++ +PD + + + + + GVGRGR
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDK---VQEETKTRADRKPPGVGRGR
Query: GRGREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGP
G R G+PA G GRG +GGRG P
Subjt: GRGREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGP
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| AT1G76300.1 snRNP core protein SMD3 | 3.0e-09 | 33.08 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGRG
+P+ LL + GH + VE+K+GE Y G ++ C+ N L + T+KDG + ++ +IRG+ +++L +PD ++ R K +G GRGRG
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGRG
Query: REDGPGGRPAKGMGRGFDDGAKAASGGRGKGGP
AKG GRG GGRG P
Subjt: REDGPGGRPAKGMGRGFDDGAKAASGGRGKGGP
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| AT4G02840.1 Small nuclear ribonucleoprotein family protein | 5.7e-08 | 39.6 | Show/hide |
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KTRADRKPPGVGRGRGRGREDGPGG
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD + + E+T K A + P G GRGRGRGR G GG
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KTRADRKPPGVGRGRGRGREDGPGG
Query: R
R
Subjt: R
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| AT4G02840.2 Small nuclear ribonucleoprotein family protein | 1.2e-05 | 36.04 | Show/hide |
Query: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KTRADRKPPGVGRGR
+ELKNG +G + + D MN HL+ V T K G + +RGN I+Y +PD + + E+T K A + P G GRGR
Subjt: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KTRADRKPPGVGRGR
Query: GRGREDGPGGR
GRGR G GGR
Subjt: GRGREDGPGGR
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| AT5G27720.1 Small nuclear ribonucleoprotein family protein | 3.6e-55 | 78.52 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE KTR DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
G +DG GA+ GRG+G GK G NR GRGRG
Subjt: GREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGANRVGGRGRG
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