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CmoCh01G010330 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G010330
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProline-rich receptor-like protein kinase PERK2
Genome locationCmo_Chr01:8082015..8082452
RNA-Seq ExpressionCmoCh01G010330
SyntenyCmoCh01G010330
Gene Ontology termsGO:0009834 - plant-type secondary cell wall biogenesis (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044950 - Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6/7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607661.1 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6, partial [Cucurbita argyrosperma subsp. sororia]2.5e-6586.58Show/hide
Query:  MAAQNTSNLGRISPPPSPN-----------------GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIED
        MAAQNTSNLGRISPPP P+                 GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIED
Subjt:  MAAQNTSNLGRISPPPSPN-----------------GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIED

Query:  DVHVDEIAKKKEHRHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS
        DVH+DEIAKKKEHRHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS
Subjt:  DVHVDEIAKKKEHRHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS

KAG7037263.1 hypothetical protein SDJN02_00886, partial [Cucurbita argyrosperma subsp. argyrosperma]5.3e-6896.32Show/hide
Query:  MAAQNTSNLGRISPP----PSPNGSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVHVDEIAKKKEH
        MAAQNTSNLGRISPP    PSPNGSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVH+DEIAKKKEH
Subjt:  MAAQNTSNLGRISPP----PSPNGSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVHVDEIAKKKEH

Query:  RHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS
        RHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS
Subjt:  RHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS

XP_022926281.1 uncharacterized protein LOC111433458 [Cucurbita moschata]4.5e-6791.03Show/hide
Query:  MAAQNTSNLGRISPPPSPN-------------GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVHV
        MAAQNTSNLGRISPPPSPN             GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVHV
Subjt:  MAAQNTSNLGRISPPPSPN-------------GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVHV

Query:  DEIAKKKEHRHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS
        DEIAKKKEHRHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS
Subjt:  DEIAKKKEHRHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS

XP_022981645.1 uncharacterized protein LOC111480702 [Cucurbita maxima]4.0e-6384.56Show/hide
Query:  MAAQNTSNLGRISPPPSPN-----------------GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIED
        MAAQNTSNLGRI PPP P+                 GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVI VDGHRKVHEDVAQDAHGRQAV VTIED
Subjt:  MAAQNTSNLGRISPPPSPN-----------------GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIED

Query:  DVHVDEIAKKKEHRHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS
        DVH+DEIAKKKEHRHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS
Subjt:  DVHVDEIAKKKEHRHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS

XP_023521688.1 uncharacterized protein LOC111785526 [Cucurbita pepo subsp. pepo]2.7e-6485.23Show/hide
Query:  MAAQNTSNLGRISPPPSPN-----------------GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIED
        MAAQNTSNL RISPPP P+                 GSCLLFFTFVAAAFFCCFIKKRNKKPCPRD+VAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIED
Subjt:  MAAQNTSNLGRISPPPSPN-----------------GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIED

Query:  DVHVDEIAKKKEHRHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS
        DVH+DEIAKKKEHRHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS
Subjt:  DVHVDEIAKKKEHRHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS

TrEMBL top hitse value%identityAlignment
A0A0A0K4D1 Uncharacterized protein5.4e-3458.28Show/hide
Query:  MAAQNTSNLGRI-----------SPPPSPN-------------GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQA
        MA +N+SNL RI           SPPPSP+             GSCL F  FVAAA  CCFIKKR KK CP+ EV E IH+DGHRKVHEDVA+  HG+QA
Subjt:  MAAQNTSNLGRI-----------SPPPSPN-------------GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQA

Query:  VMVTIEDDVHVDEIAKKKEHRHGFGLHGK-HEG----SNSSTIQVPPSSST
        V+VTIEDD+H+DEI KKKEH HG GLHGK HEG    +NS+T++V  SSS+
Subjt:  VMVTIEDDVHVDEIAKKKEHRHGFGLHGK-HEG----SNSSTIQVPPSSST

A0A5D3BXC9 Proline-rich receptor-like protein kinase PERK28.7e-3255.63Show/hide
Query:  MAAQNTSNLGRI-----------SPPPSPN-------------GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQA
        MA +N+SNL RI            PPPSP+             GSCL F  FVA    CCFIKKR KK CP+ EV E I +DGHRKVHEDVA+  HG+QA
Subjt:  MAAQNTSNLGRI-----------SPPPSPN-------------GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQA

Query:  VMVTIEDDVHVDEIAKKKEHRHGFGLHGK-HEG----SNSSTIQVPPSSST
        ++VTIEDDVH+DEI KKKEH HG GLHGK HEG    +NS+T++V  SSS+
Subjt:  VMVTIEDDVHVDEIAKKKEHRHGFGLHGK-HEG----SNSSTIQVPPSSST

A0A6J1DM43 uncharacterized protein LOC1110217151.9e-2360.95Show/hide
Query:  GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVA--QDAHGRQAVMVTIEDDVHVDEIAKKKEHRHGFG-LHGKHE-GSNSSTIQ
        G+C  FF  V AA  C  IKK+ KK C   EVAEVIHVDGHRK+HE  A     HG QAV+VTIED+V +DE+ KKKEH  G G LHGKHE G NSS+++
Subjt:  GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVA--QDAHGRQAVMVTIEDDVHVDEIAKKKEHRHGFG-LHGKHE-GSNSSTIQ

Query:  VPPSS
        V PSS
Subjt:  VPPSS

A0A6J1EEE4 uncharacterized protein LOC1114334582.2e-6791.03Show/hide
Query:  MAAQNTSNLGRISPPPSPN-------------GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVHV
        MAAQNTSNLGRISPPPSPN             GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVHV
Subjt:  MAAQNTSNLGRISPPPSPN-------------GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVHV

Query:  DEIAKKKEHRHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS
        DEIAKKKEHRHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS
Subjt:  DEIAKKKEHRHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS

A0A6J1J036 uncharacterized protein LOC1114807021.9e-6384.56Show/hide
Query:  MAAQNTSNLGRISPPPSPN-----------------GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIED
        MAAQNTSNLGRI PPP P+                 GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVI VDGHRKVHEDVAQDAHGRQAV VTIED
Subjt:  MAAQNTSNLGRISPPPSPN-----------------GSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIED

Query:  DVHVDEIAKKKEHRHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS
        DVH+DEIAKKKEHRHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS
Subjt:  DVHVDEIAKKKEHRHGFGLHGKHEGSNSSTIQVPPSSSTLDSNVTHHQS

SwissProt top hitse value%identityAlignment
C1PGW0 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 64.6e-0639.39Show/hide
Query:  LFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVHVDE
        +F   +AA   CC IKK   K     E  E++HVD H +VHE++ Q  +G + V +T++DD+HV +
Subjt:  LFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVHVDE

C1PGW1 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7A6.9e-1035.94Show/hide
Query:  PPPSPNG----------SC-LLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVHVDEIAKKKE-HRHGFG
        PPPSP+           SC  +FF   A A   CF+KK+ KK   +   AE IH D HRKV E + Q  HG +  ++++EDD+H++E  KK E      G
Subjt:  PPPSPNG----------SC-LLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVHVDEIAKKKE-HRHGFG

Query:  LHGKHEGSNSSTIQVPPSSSTLDSNVTH
        LH  +   N+  I     SS+   +  H
Subjt:  LHGKHEGSNSSTIQVPPSSSTLDSNVTH

Q9FI79 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 71.9e-0737.23Show/hide
Query:  PPPSP------------NGSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVHVDEIAKKKE
        PPP+P            +   L F  F+AAA F C++KKR K        AE+I  D H KV E + Q  HG Q  +V +E+D+H+ E   K E
Subjt:  PPPSP------------NGSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVHVDEIAKKKE

Arabidopsis top hitse value%identityAlignment
AT5G48920.1 tracheary element differentiation-related 71.3e-0837.23Show/hide
Query:  PPPSP------------NGSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVHVDEIAKKKE
        PPP+P            +   L F  F+AAA F C++KKR K        AE+I  D H KV E + Q  HG Q  +V +E+D+H+ E   K E
Subjt:  PPPSP------------NGSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVHVDEIAKKKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCTCAAAACACTTCCAATCTGGGACGCATATCTCCGCCCCCGTCCCCCAACGGCTCATGTCTTTTGTTCTTCACATTCGTCGCAGCTGCATTCTTCTGTTGTTT
CATCAAAAAGAGAAACAAGAAACCATGTCCACGAGACGAAGTTGCAGAGGTCATCCATGTCGATGGACACAGGAAGGTCCATGAAGATGTCGCACAAGACGCCCACGGGC
GGCAGGCTGTGATGGTGACGATCGAGGACGATGTCCATGTCGACGAAATAGCGAAGAAGAAAGAGCATAGGCATGGGTTTGGGTTGCATGGGAAGCATGAAGGAAGCAAT
TCTAGCACAATCCAAGTGCCACCATCTTCTTCAACTTTGGATTCTAACGTTACCCATCACCAATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCTCAAAACACTTCCAATCTGGGACGCATATCTCCGCCCCCGTCCCCCAACGGCTCATGTCTTTTGTTCTTCACATTCGTCGCAGCTGCATTCTTCTGTTGTTT
CATCAAAAAGAGAAACAAGAAACCATGTCCACGAGACGAAGTTGCAGAGGTCATCCATGTCGATGGACACAGGAAGGTCCATGAAGATGTCGCACAAGACGCCCACGGGC
GGCAGGCTGTGATGGTGACGATCGAGGACGATGTCCATGTCGACGAAATAGCGAAGAAGAAAGAGCATAGGCATGGGTTTGGGTTGCATGGGAAGCATGAAGGAAGCAAT
TCTAGCACAATCCAAGTGCCACCATCTTCTTCAACTTTGGATTCTAACGTTACCCATCACCAATCTTGA
Protein sequenceShow/hide protein sequence
MAAQNTSNLGRISPPPSPNGSCLLFFTFVAAAFFCCFIKKRNKKPCPRDEVAEVIHVDGHRKVHEDVAQDAHGRQAVMVTIEDDVHVDEIAKKKEHRHGFGLHGKHEGSN
SSTIQVPPSSSTLDSNVTHHQS