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CmoCh01G010400 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G010400
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionZinc finger protein
Genome locationCmo_Chr01:8206880..8207419
RNA-Seq ExpressionCmoCh01G010400
SyntenyCmoCh01G010400
Gene Ontology termsGO:0009788 - negative regulation of abscisic acid-activated signaling pathway (biological process)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044246 - Zinc finger protein 3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8407216.1 hypothetical protein HHK36_006343 [Tetracentron sinense]8.4e-1641.3Show/hide
Query:  DSQTETKQSPKDKSHQ-PFTLNLCPNNDNDL--EELNLIDIFGHACKEEAA--EPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFKD-------
        + Q + K+  ++ +H     L+L   + N +   ELNLI+ F   C + A+  EPRVFSCNYCQRKF+SSQALGGHQNAH RER LAK G +        
Subjt:  DSQTETKQSPKDKSHQ-PFTLNLCPNNDNDL--EELNLIDIFGHACKEEAA--EPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFKD-------

Query:  ---------------PFHGSYRSSFGVQTNSMVLRKFY
                       P HG    S G+Q +SM+ + FY
Subjt:  ---------------PFHGSYRSSFGVQTNSMVLRKFY

KAG6607668.1 Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. sororia]3.7e-9697.77Show/hide
Query:  MSLFTNSQWLLQQDSQTETKQSPKDKSHQPFTLNLCPNNDNDLEELNLIDIFGHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFK
        MSLFTNSQWLLQQDSQTETKQSPKDKSHQPFTLNLCPNNDNDLEELNLIDIFGHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGF+
Subjt:  MSLFTNSQWLLQQDSQTETKQSPKDKSHQPFTLNLCPNNDNDLEELNLIDIFGHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFK

Query:  DPFHGSYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKESAVDVGSWHEQYSKSTKRNESIELECLDLSLKL
        DPFHGSYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWK SAVDVG WHEQYSKSTKRNES+ELECLDLSLKL
Subjt:  DPFHGSYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKESAVDVGSWHEQYSKSTKRNESIELECLDLSLKL

KAG7028483.1 Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]7.7e-9496.65Show/hide
Query:  MSLFTNSQWLLQQDSQTETKQSPKDKSHQPFTLNLCPNNDNDLEELNLIDIFGHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFK
        MSLFTNSQWLLQQDSQTETKQSPKDKSHQPFTLNL PNNDNDLEELNLIDIFGHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGF+
Subjt:  MSLFTNSQWLLQQDSQTETKQSPKDKSHQPFTLNLCPNNDNDLEELNLIDIFGHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFK

Query:  DPFHGSYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKESAVDVGSWHEQYSKSTKRNESIELECLDLSLKL
        DPF G YRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWK SAVDVGSWHEQYSKSTKRNES+ELECLDLSLKL
Subjt:  DPFHGSYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKESAVDVGSWHEQYSKSTKRNESIELECLDLSLKL

PSS11198.1 Zinc finger protein [Actinidia chinensis var. chinensis]1.1e-1538.46Show/hide
Query:  QQDSQTETKQSPKDKSHQPFTLNLCPNNDNDLEELNLIDIFGHAC--------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFKD--
        ++D++ E ++  +++  Q   L + P+  N   ELNLID   +          +E  AEPRVFSCNYCQRKFFSSQALGGHQNAH RER LAK G K   
Subjt:  QQDSQTETKQSPKDKSHQPFTLNLCPNNDNDLEELNLIDIFGHAC--------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFKD--

Query:  --------------------PFHGSYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKESAVD
                            P HG+Y  S G+Q +SM+ +  Y     G  +RG +     GW    +D
Subjt:  --------------------PFHGSYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKESAVD

XP_015871773.1 zinc finger protein 1 [Ziziphus jujuba]1.1e-1537.21Show/hide
Query:  DSQTETKQSPKDKSHQPFTLNLCPNNDNDLEELNLIDIF------------GHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFKD
        D +   K   + K+     L+L  +N++   ELNLID F             H  +    EPRVFSCNYCQRKF+SSQALGGHQNAH RER LAK G K 
Subjt:  DSQTETKQSPKDKSHQPFTLNLCPNNDNDLEELNLIDIF------------GHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFKD

Query:  -----------------------PFHGSYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKESAVD
                               P HGS+  S G+Q +SM+ +  Y+ +     V  S    R GW    +D
Subjt:  -----------------------PFHGSYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKESAVD

TrEMBL top hitse value%identityAlignment
A0A2R6QMR5 Zinc finger protein5.3e-1638.46Show/hide
Query:  QQDSQTETKQSPKDKSHQPFTLNLCPNNDNDLEELNLIDIFGHAC--------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFKD--
        ++D++ E ++  +++  Q   L + P+  N   ELNLID   +          +E  AEPRVFSCNYCQRKFFSSQALGGHQNAH RER LAK G K   
Subjt:  QQDSQTETKQSPKDKSHQPFTLNLCPNNDNDLEELNLIDIFGHAC--------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFKD--

Query:  --------------------PFHGSYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKESAVD
                            P HG+Y  S G+Q +SM+ +  Y     G  +RG +     GW    +D
Subjt:  --------------------PFHGSYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKESAVD

A0A6J1G9W3 zinc finger protein 3-like1.5e-1551.75Show/hide
Query:  FTLNLCPNNDND---LEELNLIDIFGHACKEE----AAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKA----------GFKDPF--------HG
        F L+LC NND+D     ELNLID F      E      EPRVFSCNYCQRKF+SSQALGGHQNAH RER LAK           GF   +        HG
Subjt:  FTLNLCPNNDND---LEELNLIDIFGHACKEE----AAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKA----------GFKDPF--------HG

Query:  SYRSSFGVQTNSMV
        S+  S G+Q +SMV
Subjt:  SYRSSFGVQTNSMV

A0A6J1KC99 zinc finger protein 3-like1.5e-1551.75Show/hide
Query:  FTLNLCPNNDND---LEELNLIDIFGHACKEE----AAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKA----------GFKDPF--------HG
        F L+LC NND+D     ELNLID F      E      EPRVFSCNYCQRKF+SSQALGGHQNAH RER LAK           GF   +        HG
Subjt:  FTLNLCPNNDND---LEELNLIDIFGHACKEE----AAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKA----------GFKDPF--------HG

Query:  SYRSSFGVQTNSMV
        S+  S G+Q +SMV
Subjt:  SYRSSFGVQTNSMV

A0A6P3Z4Q7 zinc finger protein 15.3e-1637.21Show/hide
Query:  DSQTETKQSPKDKSHQPFTLNLCPNNDNDLEELNLIDIF------------GHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFKD
        D +   K   + K+     L+L  +N++   ELNLID F             H  +    EPRVFSCNYCQRKF+SSQALGGHQNAH RER LAK G K 
Subjt:  DSQTETKQSPKDKSHQPFTLNLCPNNDNDLEELNLIDIF------------GHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFKD

Query:  -----------------------PFHGSYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKESAVD
                               P HGS+  S G+Q +SM+ +  Y+ +     V  S    R GW    +D
Subjt:  -----------------------PFHGSYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKESAVD

A0A7J0FZA7 Zinc finger protein 32.0e-1539.38Show/hide
Query:  QQDSQTETKQSPKDKSHQPFTLNLCPNNDNDLE-----ELNLIDIFGH-ACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFKD----
        Q + Q +  Q  K  ++    L+L  + + DL+     ELNLI+ F   +      EPRVFSCNYCQRKF+SSQALGGHQNAH RER LAK G K     
Subjt:  QQDSQTETKQSPKDKSHQPFTLNLCPNNDNDLE-----ELNLIDIFGH-ACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFKD----

Query:  -----------PFHGSYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKESAVD
                   P HGS+  S G+Q +SM+ +  Y     G     S      GW    +D
Subjt:  -----------PFHGSYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKESAVD

SwissProt top hitse value%identityAlignment
Q39261 Zinc finger protein 21.1e-1085.71Show/hide
Query:  EPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAK
        +PRVFSCNYCQRKF+SSQALGGHQNAH  ER LAK
Subjt:  EPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAK

Q39262 Zinc finger protein 34.0e-1344.55Show/hide
Query:  NDLEELNLIDIFGHAC-----KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFKD----------------PFHGSYRS--SFGVQTNS
        N   ELNLID              + E ++FSCNYCQR F+SSQALGGHQNAH RER LAK G +                 PFHG Y +  S G+Q +S
Subjt:  NDLEELNLIDIFGHAC-----KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFKD----------------PFHGSYRS--SFGVQTNS

Query:  M
        +
Subjt:  M

Q39263 Zinc finger protein 43.4e-1237.58Show/hide
Query:  SQTETKQSPKDKSHQPFTLNLC------PNNDNDLEELNLIDIFGHAC----------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAK--
        SQ  +  SP  + ++P +LNL        NN+ DLE  +L                  ++ +   RVFSCNYCQRKF+SSQALGGHQNAH RER LAK  
Subjt:  SQTETKQSPKDKSHQPFTLNLC------PNNDNDLEELNLIDIFGHAC----------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAK--

Query:  --AGFKDPFHGSYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKESAVDV
           G    F G   SS      +         HG G     SFR+       SA DV
Subjt:  --AGFKDPFHGSYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKESAVDV

Q39266 Zinc finger protein 75.8e-1246.81Show/hide
Query:  PNNDNDLEELNLIDIFGHACKEEAAE--PRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFK-----DPFHGSY---RSSFGVQTNSMVL
        P +++   +L L D F    K    E  PRVFSCNYC+RKF+SSQALGGHQNAH RER +AK            H  Y    SS G+Q +S +L
Subjt:  PNNDNDLEELNLIDIFGHACKEEAAE--PRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFK-----DPFHGSY---RSSFGVQTNSMVL

Q42485 Zinc finger protein 12.8e-1453.49Show/hide
Query:  KDKSHQPFT--LNLCPNNDNDLEELNLIDIFGHAC---------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAG
        K + HQ     L L         ELNLID F  +          +E+ A+PRVFSCNYCQRKF+SSQALGGHQNAH RER LAK G
Subjt:  KDKSHQPFT--LNLCPNNDNDLEELNLIDIFGHAC---------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAG

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 74.2e-1346.81Show/hide
Query:  PNNDNDLEELNLIDIFGHACKEEAAE--PRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFK-----DPFHGSY---RSSFGVQTNSMVL
        P +++   +L L D F    K    E  PRVFSCNYC+RKF+SSQALGGHQNAH RER +AK            H  Y    SS G+Q +S +L
Subjt:  PNNDNDLEELNLIDIFGHACKEEAAE--PRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFK-----DPFHGSY---RSSFGVQTNSMVL

AT1G66140.1 zinc finger protein 42.4e-1337.58Show/hide
Query:  SQTETKQSPKDKSHQPFTLNLC------PNNDNDLEELNLIDIFGHAC----------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAK--
        SQ  +  SP  + ++P +LNL        NN+ DLE  +L                  ++ +   RVFSCNYCQRKF+SSQALGGHQNAH RER LAK  
Subjt:  SQTETKQSPKDKSHQPFTLNLC------PNNDNDLEELNLIDIFGHAC----------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAK--

Query:  --AGFKDPFHGSYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKESAVDV
           G    F G   SS      +         HG G     SFR+       SA DV
Subjt:  --AGFKDPFHGSYRSSFGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKESAVDV

AT1G80730.1 zinc-finger protein 12.0e-1553.49Show/hide
Query:  KDKSHQPFT--LNLCPNNDNDLEELNLIDIFGHAC---------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAG
        K + HQ     L L         ELNLID F  +          +E+ A+PRVFSCNYCQRKF+SSQALGGHQNAH RER LAK G
Subjt:  KDKSHQPFT--LNLCPNNDNDLEELNLIDIFGHAC---------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAG

AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein1.1e-1344.33Show/hide
Query:  EELNLIDIFGHAC------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFK---------------DPFHGSYRS-SFGVQTNSM
        +ELNL+D               + E ++FSCNYCQR F+SSQALGGHQNAH RER LAK G +                PFHG Y + + G+Q +SM
Subjt:  EELNLIDIFGHAC------KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFK---------------DPFHGSYRS-SFGVQTNSM

AT5G25160.1 zinc finger protein 32.9e-1444.55Show/hide
Query:  NDLEELNLIDIFGHAC-----KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFKD----------------PFHGSYRS--SFGVQTNS
        N   ELNLID              + E ++FSCNYCQR F+SSQALGGHQNAH RER LAK G +                 PFHG Y +  S G+Q +S
Subjt:  NDLEELNLIDIFGHAC-----KEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFKD----------------PFHGSYRS--SFGVQTNS

Query:  M
        +
Subjt:  M


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCTCTTCACAAACAGTCAATGGCTACTTCAACAAGATAGCCAAACAGAGACAAAACAAAGCCCAAAGGACAAATCCCATCAACCTTTTACCCTCAACCTATGCCC
CAACAATGACAATGATTTGGAAGAACTCAACCTCATTGACATCTTTGGTCATGCTTGTAAAGAAGAAGCAGCTGAGCCTAGAGTTTTCTCTTGCAATTATTGCCAAAGGA
AGTTTTTTAGCTCACAAGCTCTTGGTGGCCACCAAAATGCTCATAGTCGAGAGAGAAAGCTGGCTAAAGCAGGTTTTAAAGACCCTTTCCATGGATCCTATAGATCATCC
TTTGGAGTTCAAACAAATTCTATGGTGCTTCGCAAGTTTTATAGGAAGCATGGAAGAGGGGAACTAGTTCGTGGGAGTTTTCGATCATGGCGCGGCGGTTGGAAGGAGTC
TGCAGTCGACGTTGGGTCGTGGCATGAACAATATTCGAAGAGTACTAAACGTAATGAATCGATCGAGCTAGAGTGTCTAGATTTGTCTCTTAAGCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCTCTTCACAAACAGTCAATGGCTACTTCAACAAGATAGCCAAACAGAGACAAAACAAAGCCCAAAGGACAAATCCCATCAACCTTTTACCCTCAACCTATGCCC
CAACAATGACAATGATTTGGAAGAACTCAACCTCATTGACATCTTTGGTCATGCTTGTAAAGAAGAAGCAGCTGAGCCTAGAGTTTTCTCTTGCAATTATTGCCAAAGGA
AGTTTTTTAGCTCACAAGCTCTTGGTGGCCACCAAAATGCTCATAGTCGAGAGAGAAAGCTGGCTAAAGCAGGTTTTAAAGACCCTTTCCATGGATCCTATAGATCATCC
TTTGGAGTTCAAACAAATTCTATGGTGCTTCGCAAGTTTTATAGGAAGCATGGAAGAGGGGAACTAGTTCGTGGGAGTTTTCGATCATGGCGCGGCGGTTGGAAGGAGTC
TGCAGTCGACGTTGGGTCGTGGCATGAACAATATTCGAAGAGTACTAAACGTAATGAATCGATCGAGCTAGAGTGTCTAGATTTGTCTCTTAAGCTGTGA
Protein sequenceShow/hide protein sequence
MSLFTNSQWLLQQDSQTETKQSPKDKSHQPFTLNLCPNNDNDLEELNLIDIFGHACKEEAAEPRVFSCNYCQRKFFSSQALGGHQNAHSRERKLAKAGFKDPFHGSYRSS
FGVQTNSMVLRKFYRKHGRGELVRGSFRSWRGGWKESAVDVGSWHEQYSKSTKRNESIELECLDLSLKL