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CmoCh01G010490 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G010490
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRibosomal protein S12
Genome locationCmo_Chr01:8280811..8281354
RNA-Seq ExpressionCmoCh01G010490
SyntenyCmoCh01G010490
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QKI32043.1 ribosomal protein S12 [Ombrophytum subterraneum]5.7e-1475.81Show/hide
Query:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD
        MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP             P K+AKVRLSNRHD
Subjt:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD

QWQ55715.1 ribosomal protein S12 [Erythropalum scandens]5.7e-1475.81Show/hide
Query:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD
        MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP             P K+AKVRLSNRHD
Subjt:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD

XP_019074204.1 PREDICTED: uncharacterized protein LOC109122216 [Vitis vinifera]1.5e-1475.81Show/hide
Query:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD
        MPTLNQLIRHGREEKR TDRTRASDQCPQKQGVRP             PCK+AKVRLSNRHD
Subjt:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD

XP_038887595.1 ribosomal protein S12, mitochondrial [Benincasa hispida]8.8e-1575.81Show/hide
Query:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD
        MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP             PCK+AKVRL NRHD
Subjt:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD

YP_010021226.1 ribosomal protein S12 [Malania oleifera]5.7e-1475.81Show/hide
Query:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD
        MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP             P K+AKVRLSNRHD
Subjt:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD

TrEMBL top hitse value%identityAlignment
A0A6C0M9Y2 Ribosomal protein S122.8e-1475.81Show/hide
Query:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD
        MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP             P K+AKVRLSNRHD
Subjt:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD

A0A7G8P5H7 Ribosomal protein S122.8e-1475.81Show/hide
Query:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD
        MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP             P K+AKVRLSNRHD
Subjt:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD

F6GZF4 Uncharacterized protein7.3e-1575.81Show/hide
Query:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD
        MPTLNQLIRHGREEKR TDRTRASDQCPQKQGVRP             PCK+AKVRLSNRHD
Subjt:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD

Q9B6J7 Ribosomal protein L122.8e-1475.81Show/hide
Query:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD
        MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP             P K+AKVRLSNRHD
Subjt:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD

Q9XPB3 Rps122.8e-1475.81Show/hide
Query:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD
        MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP             P K+AKVRLSNRHD
Subjt:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD

SwissProt top hitse value%identityAlignment
P27070 Ribosomal protein S12, mitochondrial1.7e-1674.19Show/hide
Query:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD
        MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP             P K+AKVRL+NRHD
Subjt:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD

P60096 Ribosomal protein S12, mitochondrial7.5e-1775.81Show/hide
Query:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD
        MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP             P K+AKVRLSNRHD
Subjt:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD

P60097 Ribosomal protein S12, mitochondrial7.5e-1775.81Show/hide
Query:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD
        MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP             P K+AKVRLSNRHD
Subjt:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD

P68535 Ribosomal protein S12, mitochondrial9.2e-1570.97Show/hide
Query:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD
        MP+LNQLIRHGREEKRRTDRTRA DQCPQKQGV P             P K+AKVRLSNRHD
Subjt:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD

P68536 Ribosomal protein S12, mitochondrial9.2e-1570.97Show/hide
Query:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD
        MP+LNQLIRHGREEKRRTDRTRA DQCPQKQGV P             P K+AKVRLSNRHD
Subjt:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD

Arabidopsis top hitse value%identityAlignment
AT2G07675.1 Ribosomal protein S12/S23 family protein9.4e-1567.74Show/hide
Query:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD
        MPT NQLIRHGREEKRRTDRTRA D+CPQK GV P             P K+AKVRLSNRHD
Subjt:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD

AT2G07773.1 unknown protein8.8e-0595.24Show/hide
Query:  MPTLNQLIRHGREEKRRTDRT
        MPT NQLIRHGREEKRRTDRT
Subjt:  MPTLNQLIRHGREEKRRTDRT

ATMG00910.1 hypothetical protein1.2e-0495.24Show/hide
Query:  MPTLNQLIRHGREEKRRTDRT
        MPT NQLIRHGREEKRRTDRT
Subjt:  MPTLNQLIRHGREEKRRTDRT

ATMG00980.1 Ribosomal protein S12/S23 family protein9.4e-1567.74Show/hide
Query:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD
        MPT NQLIRHGREEKRRTDRTRA D+CPQK GV P             P K+AKVRLSNRHD
Subjt:  MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRP------------PPCKMAKVRLSNRHD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTACATTAAATCAATTGATTCGTCATGGTAGAGAAGAAAAACGGCGCACGGACCGTACTCGAGCTTCGGATCAATGTCCCCAGAAGCAAGGAGTACGCCCGCCTCC
ATGTAAGATGGCCAAAGTACGGTTGAGCAATCGACATGATAATTTACTCACATTTCGGACGAAGAGATTAAGTCTACCTAATGGTTTATCAAATGTTCGATCACATGATC
GAATGAAAGATCAATTGATAAATGGTTGTCTCATACCATATATTAACAAAGATTTCCGTGACAAGTTAGACAATAAAATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTACATTAAATCAATTGATTCGTCATGGTAGAGAAGAAAAACGGCGCACGGACCGTACTCGAGCTTCGGATCAATGTCCCCAGAAGCAAGGAGTACGCCCGCCTCC
ATGTAAGATGGCCAAAGTACGGTTGAGCAATCGACATGATAATTTACTCACATTTCGGACGAAGAGATTAAGTCTACCTAATGGTTTATCAAATGTTCGATCACATGATC
GAATGAAAGATCAATTGATAAATGGTTGTCTCATACCATATATTAACAAAGATTTCCGTGACAAGTTAGACAATAAAATCTAA
Protein sequenceShow/hide protein sequence
MPTLNQLIRHGREEKRRTDRTRASDQCPQKQGVRPPPCKMAKVRLSNRHDNLLTFRTKRLSLPNGLSNVRSHDRMKDQLINGCLIPYINKDFRDKLDNKI