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CmoCh01G010630 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G010630
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTransmembrane protein, putative
Genome locationCmo_Chr01:8552381..8552940
RNA-Seq ExpressionCmoCh01G010630
SyntenyCmoCh01G010630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607695.1 hypothetical protein SDJN03_01037, partial [Cucurbita argyrosperma subsp. sororia]2.3e-6894.16Show/hide
Query:  MDEEIEQFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLLSNSLQFLKLLDLVSSKTNHHLLLNFVFSIFSSILSLLITYAIVYTIAAGIYIARDVS
        MDEEI+QFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLLSNS QFLKLLDLVSSKTNHH+LLNFVFSIFSSILSLLITYAIVYTIAAGIYIARDVS
Subjt:  MDEEIEQFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLLSNSLQFLKLLDLVSSKTNHHLLLNFVFSIFSSILSLLITYAIVYTIAAGIYIARDVS

Query:  NFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILINHKIAV
        NFKHVMRVLPKVWNQILVMFL  CAALIA GFITYTVLRWMPVIEILI+HKI +
Subjt:  NFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILINHKIAV

KAG7025019.1 hypothetical protein SDJN02_13841, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-1949.1Show/hide
Query:  FLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLL-------SN-------------------SLQFLKLLDLVSSKTNHHLLLNFVFSIFSSILSLLI
        F GI GILQ+T+K I Q  +IFT ITLAFILPLSLL       SN                   + QFLKL DLVSS+  + +L      IFS+I SLL 
Subjt:  FLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLL-------SN-------------------SLQFLKLLDLVSSKTNHHLLLNFVFSIFSSILSLLI

Query:  TYAIVYTIAAGIYIARDVSNFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILI
        T A+VYT+A  IY ARDVS F  V+RVLPKVW ++LV FL   AA +A  F+ + V+  +PVI I+I
Subjt:  TYAIVYTIAAGIYIARDVSNFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILI

KAG7037278.1 hypothetical protein SDJN02_00901, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-6894.16Show/hide
Query:  MDEEIEQFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLLSNSLQFLKLLDLVSSKTNHHLLLNFVFSIFSSILSLLITYAIVYTIAAGIYIARDVS
        MDEEI+QFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLLSNS QFLKLLDLVSSKTNHH+LLNFVFSIFSSILSLLITYAIVYTIAAGIYIARDVS
Subjt:  MDEEIEQFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLLSNSLQFLKLLDLVSSKTNHHLLLNFVFSIFSSILSLLITYAIVYTIAAGIYIARDVS

Query:  NFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILINHKIAV
        NFKHVMRVLPKVWNQILVMFL  CAALIA GFITYTVLRWMPVIEILI+HKI +
Subjt:  NFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILINHKIAV

KGN47744.1 hypothetical protein Csa_003583 [Cucumis sativus]3.3e-1945.76Show/hide
Query:  MDE---EIEQFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLL--------------------------SNSLQFLKLLDLVSSKTNHHLLLNFVFS
        MDE   E  +F+GI+GIL +T+K I Q  +IFT ITL FILPLSLL                           ++ QFLKL  L+SS+  ++ L NF F 
Subjt:  MDE---EIEQFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLL--------------------------SNSLQFLKLLDLVSSKTNHHLLLNFVFS

Query:  IFSSILSLLITYAIVYTIAAGIYIARDVSNFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILI
        IFS I SLL T A VYT+A  IY ARD+S F  VM VLPK+W Q+L+ FL   A++ A  F+   VL  +P+I ILI
Subjt:  IFSSILSLLITYAIVYTIAAGIYIARDVSNFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILI

XP_022153697.1 uncharacterized protein LOC111021150 [Momordica charantia]1.7e-1841.53Show/hide
Query:  QFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLL--------------------------SNSLQFLKLLDLVSSKTNHHLLLNFVFSIFSSILSLL
        QFLGI GILQ+T+K I Q  RIFTHITL FILPLSLL                           ++ +FLKL DLVSS+   H L    F + S+  SLL
Subjt:  QFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLL--------------------------SNSLQFLKLLDLVSSKTNHHLLLNFVFSIFSSILSLL

Query:  ITYAIVYTIAAGIYIARDVSNFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILINHKIAVEDGCKAIGV
         T AIV+T+A+ +Y AR VS FKHV   +PK+W ++L+ F+   A + A  F+  +VL  +PV+ ++I      +DG  + G+
Subjt:  ITYAIVYTIAAGIYIARDVSNFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILINHKIAVEDGCKAIGV

TrEMBL top hitse value%identityAlignment
A0A0A0KFW2 Uncharacterized protein1.6e-1945.76Show/hide
Query:  MDE---EIEQFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLL--------------------------SNSLQFLKLLDLVSSKTNHHLLLNFVFS
        MDE   E  +F+GI+GIL +T+K I Q  +IFT ITL FILPLSLL                           ++ QFLKL  L+SS+  ++ L NF F 
Subjt:  MDE---EIEQFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLL--------------------------SNSLQFLKLLDLVSSKTNHHLLLNFVFS

Query:  IFSSILSLLITYAIVYTIAAGIYIARDVSNFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILI
        IFS I SLL T A VYT+A  IY ARD+S F  VM VLPK+W Q+L+ FL   A++ A  F+   VL  +P+I ILI
Subjt:  IFSSILSLLITYAIVYTIAAGIYIARDVSNFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILI

A0A6J1DHJ9 uncharacterized protein LOC1110211522.0e-1442.14Show/hide
Query:  QFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSL---------LSNSLQFLKLLDLVSSKTNHHLLLNFVFSIFSSILSLLITYAIVYTIAAGIYIAR
        QFLGI GILQ+T+K I +  RIFT ITLAFILP SL         +  + +F KL D+VSSK+  + L NFV  I S++  LL T A+ YT+A+ I+ AR
Subjt:  QFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSL---------LSNSLQFLKLLDLVSSKTNHHLLLNFVFSIFSSILSLLITYAIVYTIAAGIYIAR

Query:  DVSNFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILINHKIAVED
        DV+ F+HV+ V+PK+W ++L  F        A     +  L    +I + +N   A  D
Subjt:  DVSNFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILINHKIAVED

A0A6J1DI62 uncharacterized protein LOC1110211513.0e-1846.84Show/hide
Query:  QFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLLS-NSLQ--------FLKLLDLVSSKTNHHLLLNFVFSIFSSILSLLITYAIVYTIAAGIYIAR
        QFLGIYGILQ+T+K I +  RIFT I+LAFILPLSLLS  +LQ        FLKL DLVSS+T H++L NF F I S++ SLL   AI  T+AA +Y +R
Subjt:  QFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLLS-NSLQ--------FLKLLDLVSSKTNHHLLLNFVFSIFSSILSLLITYAIVYTIAAGIYIAR

Query:  DVSNFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILINHKIAVE
        DV  F H++  LPK+  ++L   L   AA +A     + +L  + +I +++ H I ++
Subjt:  DVSNFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILINHKIAVE

A0A6J1DI65 uncharacterized protein LOC1110211552.7e-1436.93Show/hide
Query:  MDEEIE--QFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLL--------------------------SNSLQFLKLLDLVSSKTNHHLLLNFVFSI
        MD E++  Q LGI GI Q+T K I +  +IF  ITLAFILPLSLL                           ++ QFLKL  LVSS   H+ L++  + I
Subjt:  MDEEIE--QFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLL--------------------------SNSLQFLKLLDLVSSKTNHHLLLNFVFSI

Query:  FSSILSLLITYAIVYTIAAGIYIARDVSNFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILI
        FS+  SLL T A++Y +A+ IY A    +FKHV+  +P+ W ++L+ FL   AA++   F    ++ ++ +I ++I
Subjt:  FSSILSLLITYAIVYTIAAGIYIARDVSNFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILI

A0A6J1DJN3 uncharacterized protein LOC1110211508.0e-1941.53Show/hide
Query:  QFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLL--------------------------SNSLQFLKLLDLVSSKTNHHLLLNFVFSIFSSILSLL
        QFLGI GILQ+T+K I Q  RIFTHITL FILPLSLL                           ++ +FLKL DLVSS+   H L    F + S+  SLL
Subjt:  QFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLL--------------------------SNSLQFLKLLDLVSSKTNHHLLLNFVFSIFSSILSLL

Query:  ITYAIVYTIAAGIYIARDVSNFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILINHKIAVEDGCKAIGV
         T AIV+T+A+ +Y AR VS FKHV   +PK+W ++L+ F+   A + A  F+  +VL  +PV+ ++I      +DG  + G+
Subjt:  ITYAIVYTIAAGIYIARDVSNFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILINHKIAVEDGCKAIGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G31130.1 unknown protein5.0e-0532.41Show/hide
Query:  QFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLS--LLSNSLQFLKLL------DLVSSKTNHH-----LLLNFVFSIFSSILSLLITYAIVYTIAAGI
        QFL I  +LQ++    ++S R F  ITL+FI PLS  +L++SL    +L      D  +S  + H     L+  F + IF    SLL T A+V+T+A+ +
Subjt:  QFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLS--LLSNSLQFLKLL------DLVSSKTNHH-----LLLNFVFSIFSSILSLLITYAIVYTIAAGI

Query:  YIARDVSNFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVL
        Y  + VS F   +  +PKV+ ++ + FL     + A   + +  L
Subjt:  YIARDVSNFKHVMRVLPKVWNQILVMFLVTCAALIALGFITYTVL

AT5G44860.1 unknown protein5.9e-0637.5Show/hide
Query:  QFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLS--LLSNSL---QFLKLLDLV----SSKTNHH----LLLNFVFSIFSSILSLLITYAIVYTIAAGI
        QFL I GIL+++    + S + F  ITL  I PLS  +L++SL     L  LD       SKTNH     L+  F++ IF    SLL T A+V+T+A+ +
Subjt:  QFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLS--LLSNSL---QFLKLLDLV----SSKTNHH----LLLNFVFSIFSSILSLLITYAIVYTIAAGI

Query:  YIARDVSNFKHVMRVLPKVWNQILVMFL
        Y  + VS F   M  +P V  ++ + FL
Subjt:  YIARDVSNFKHVMRVLPKVWNQILVMFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAGAAATAGAGCAATTCTTAGGAATCTATGGAATTCTCCAACAAACCTACAAATTCATACGACAATCGACAAGAATCTTCACCCACATCACTCTTGCCTTTAT
TCTTCCTCTCTCTCTCTTATCCAATTCCCTCCAATTCCTTAAACTCCTCGACCTCGTTTCCTCCAAAACAAACCATCATCTTCTCCTCAACTTCGTTTTCTCAATCTTCT
CATCCATCTTATCTCTCCTCATCACCTATGCCATCGTCTACACAATCGCGGCCGGTATCTACATTGCACGTGACGTTTCTAATTTCAAACACGTGATGAGAGTCCTCCCA
AAAGTTTGGAACCAGATTCTTGTCATGTTTTTGGTCACTTGTGCAGCTCTAATTGCCTTAGGATTTATTACTTACACCGTGCTGCGTTGGATGCCTGTGATCGAGATCTT
AATCAACCATAAAATTGCTGTCGAGGATGGTTGTAAAGCCATCGGTGTGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAAGAAATAGAGCAATTCTTAGGAATCTATGGAATTCTCCAACAAACCTACAAATTCATACGACAATCGACAAGAATCTTCACCCACATCACTCTTGCCTTTAT
TCTTCCTCTCTCTCTCTTATCCAATTCCCTCCAATTCCTTAAACTCCTCGACCTCGTTTCCTCCAAAACAAACCATCATCTTCTCCTCAACTTCGTTTTCTCAATCTTCT
CATCCATCTTATCTCTCCTCATCACCTATGCCATCGTCTACACAATCGCGGCCGGTATCTACATTGCACGTGACGTTTCTAATTTCAAACACGTGATGAGAGTCCTCCCA
AAAGTTTGGAACCAGATTCTTGTCATGTTTTTGGTCACTTGTGCAGCTCTAATTGCCTTAGGATTTATTACTTACACCGTGCTGCGTTGGATGCCTGTGATCGAGATCTT
AATCAACCATAAAATTGCTGTCGAGGATGGTTGTAAAGCCATCGGTGTGGCTTAA
Protein sequenceShow/hide protein sequence
MDEEIEQFLGIYGILQQTYKFIRQSTRIFTHITLAFILPLSLLSNSLQFLKLLDLVSSKTNHHLLLNFVFSIFSSILSLLITYAIVYTIAAGIYIARDVSNFKHVMRVLP
KVWNQILVMFLVTCAALIALGFITYTVLRWMPVIEILINHKIAVEDGCKAIGVA