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CmoCh01G010810 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G010810
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGPI-anchored protein LLG1-like
Genome locationCmo_Chr01:8998167..8998615
RNA-Seq ExpressionCmoCh01G010810
SyntenyCmoCh01G010810
Gene Ontology termsNA
InterPro domainsIPR039307 - GPI-anchored protein LORELEI-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037290.1 GPI-anchored protein LLG1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2670.3Show/hide
Query:  MESHPCSSLFLLLFLSILFVRAF-------------------TSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFAC
        MESH CSSLFLLLFLS  ++  F                    ++HIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEF C
Subjt:  MESHPCSSLFLLLFLSILFVRAF-------------------TSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFAC

Query:  P
        P
Subjt:  P

XP_002272406.1 PREDICTED: GPI-anchored protein LLG1 [Vitis vinifera]1.3e-1454.12Show/hide
Query:  MESHPCSSLFLLLFLSILFVRA---FTSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP
        M  +PC SL LL  L+ L   A   F S  ++ S   T RT+LQ KK+CPVNFE  NYTIITS+CKGP+Y+  LCC A  +FACP
Subjt:  MESHPCSSLFLLLFLSILFVRA---FTSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP

XP_022981660.1 GPI-anchored protein LLG1-like [Cucurbita maxima]6.5e-2781.18Show/hide
Query:  MIKMESHPCSSLFLLLFLSILFVRAFTSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP
        M KMESH CSSLFLLLFLSILFV AF S HI  S      TILQV+KACPVNFEVANYTIIT KCKGPKYTAN+CCSALAEFACP
Subjt:  MIKMESHPCSSLFLLLFLSILFVRAFTSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP

XP_023524003.1 GPI-anchored protein LLG1-like [Cucurbita pepo subsp. pepo]1.9e-3492.94Show/hide
Query:  MIKMESHPCSSLFLLLFLSILFVRAFTSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP
        M KMESH CSSLFLLLFLSILFV AF S+HIIGSTSLTTRTILQ KKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP
Subjt:  MIKMESHPCSSLFLLLFLSILFVRAFTSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP

XP_034702129.1 GPI-anchored protein LLG1-like [Vitis riparia]1.3e-1454.12Show/hide
Query:  MESHPCSSLFLLLFLSILFVRA---FTSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP
        M  +PC SL LL  L+ L   A   F S  ++ S   T RT+LQ KK+CPVNFE  NYTIITS+CKGP+Y+  LCC A  +FACP
Subjt:  MESHPCSSLFLLLFLSILFVRA---FTSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP

TrEMBL top hitse value%identityAlignment
A0A0A0K362 Uncharacterized protein6.2e-1560.26Show/hide
Query:  SLFLLLFLSILFV---RAFTSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP
        ++ LL FLS+LF     AF S H   S     R +LQ KKACPVNFE  NYTIITSKCKGP+Y    CCSAL EFACP
Subjt:  SLFLLLFLSILFV---RAFTSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP

A0A5B7BJ58 Putative GPI-anchored protein LORELEI1.6e-1563.51Show/hide
Query:  LFLLLFLSILFVRAFTSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP
        LFLL+  S     AF S  I GS + T R +LQ KKACPVNFE  NYTIITS+CKGP+Y  NLCC AL EFACP
Subjt:  LFLLLFLSILFVRAFTSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP

A0A5B7BTX3 Putative GPI-anchored protein LORELEI2.8e-1563.51Show/hide
Query:  LFLLLFLSILFVRAFTSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP
        LFLL   S      F S  I GS +LT R +LQ KKACPVNFE  NYTIITS+CKGP Y  +LCCSAL EFACP
Subjt:  LFLLLFLSILFVRAFTSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP

A0A6J1J052 GPI-anchored protein LLG1-like3.2e-2781.18Show/hide
Query:  MIKMESHPCSSLFLLLFLSILFVRAFTSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP
        M KMESH CSSLFLLLFLSILFV AF S HI  S      TILQV+KACPVNFEVANYTIIT KCKGPKYTAN+CCSALAEFACP
Subjt:  MIKMESHPCSSLFLLLFLSILFVRAFTSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP

E0CTD1 Uncharacterized protein6.2e-1554.12Show/hide
Query:  MESHPCSSLFLLLFLSILFVRA---FTSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP
        M  +PC SL LL  L+ L   A   F S  ++ S   T RT+LQ KK+CPVNFE  NYTIITS+CKGP+Y+  LCC A  +FACP
Subjt:  MESHPCSSLFLLLFLSILFVRA---FTSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP

SwissProt top hitse value%identityAlignment
B3GS44 GPI-anchored protein LORELEI4.9e-0941.77Show/hide
Query:  LFLLLFLSILFVRAFTSKHII-----GSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP
        + L  FL  L V   +S  I        TS++ R +   KK C VNFE  +Y ++T +CKGP + A  CCSA  EFACP
Subjt:  LFLLLFLSILFVRAFTSKHII-----GSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP

Q6NLF4 GPI-anchored protein LLG25.8e-1046.58Show/hide
Query:  LLLFLSILFVRAFT-SKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP
        LL  L I  +  F+ S       + T+R +LQ +  C  +F   NYTIITS+CKGP Y AN+CCSA  +FACP
Subjt:  LLLFLSILFVRAFT-SKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP

Q9FKT1 GPI-anchored protein LLG11.5e-1354.43Show/hide
Query:  SLFLLLFLSIL---FVRAFTSKHIIGSTSLTT-RTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP
        +LF  L LS+L      +F S  +  S SL   R +LQ KK CPVNFE  NYTIITSKCKGPKY    CC A  +FACP
Subjt:  SLFLLLFLSIL---FVRAFTSKHIIGSTSLTT-RTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP

Q9M0I0 GPI-anchored protein LLG34.7e-1247.06Show/hide
Query:  SHPCSSLFLLLFLSILFVRAFTSKHIIG-----STSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP
        +H C    L+  LSIL +  F   H I      S   T+R +LQ K  C  +F   NYTIITSKCKGP Y A +CCSA  +FACP
Subjt:  SHPCSSLFLLLFLSILFVRAFTSKHIIG-----STSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP

Arabidopsis top hitse value%identityAlignment
AT2G20700.1 LORELEI-LIKE-GPI ANCHORED PROTEIN 24.1e-1146.58Show/hide
Query:  LLLFLSILFVRAFT-SKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP
        LL  L I  +  F+ S       + T+R +LQ +  C  +F   NYTIITS+CKGP Y AN+CCSA  +FACP
Subjt:  LLLFLSILFVRAFT-SKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP

AT4G26466.1 lorelei3.5e-1041.77Show/hide
Query:  LFLLLFLSILFVRAFTSKHII-----GSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP
        + L  FL  L V   +S  I        TS++ R +   KK C VNFE  +Y ++T +CKGP + A  CCSA  EFACP
Subjt:  LFLLLFLSILFVRAFTSKHII-----GSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP

AT4G28280.1 LORELEI-LIKE-GPI ANCHORED PROTEIN 31.3e-0965.79Show/hide
Query:  ACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP
        AC  +F   NYTIITSKCKGP Y A +CCSA  +FACP
Subjt:  ACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP

AT4G28280.2 LORELEI-LIKE-GPI ANCHORED PROTEIN 33.4e-1347.06Show/hide
Query:  SHPCSSLFLLLFLSILFVRAFTSKHIIG-----STSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP
        +H C    L+  LSIL +  F   H I      S   T+R +LQ K  C  +F   NYTIITSKCKGP Y A +CCSA  +FACP
Subjt:  SHPCSSLFLLLFLSILFVRAFTSKHIIG-----STSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP

AT5G56170.1 LORELEI-LIKE-GPI-ANCHORED PROTEIN 11.0e-1454.43Show/hide
Query:  SLFLLLFLSIL---FVRAFTSKHIIGSTSLTT-RTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP
        +LF  L LS+L      +F S  +  S SL   R +LQ KK CPVNFE  NYTIITSKCKGPKY    CC A  +FACP
Subjt:  SLFLLLFLSIL---FVRAFTSKHIIGSTSLTT-RTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAAAATGGAGTCCCATCCATGCTCCTCCCTCTTCCTTCTCCTCTTTCTTTCCATACTCTTCGTCCGGGCTTTCACATCAAAGCATATCATTGGATCTACAAGTCT
CACCACTCGTACAATTCTTCAAGTCAAAAAAGCTTGTCCAGTGAATTTTGAAGTTGCGAACTACACCATCATCACAAGCAAGTGCAAGGGGCCTAAATACACAGCCAATC
TTTGCTGCTCAGCTCTTGCAGAATTTGCGTGCCCCTAA
mRNA sequenceShow/hide mRNA sequence
CAGACTATAAGAAACCCTCTGCCACATTGCTCTCAAGATGATCAAAATGGAGTCCCATCCATGCTCCTCCCTCTTCCTTCTCCTCTTTCTTTCCATACTCTTCGTCCGGG
CTTTCACATCAAAGCATATCATTGGATCTACAAGTCTCACCACTCGTACAATTCTTCAAGTCAAAAAAGCTTGTCCAGTGAATTTTGAAGTTGCGAACTACACCATCATC
ACAAGCAAGTGCAAGGGGCCTAAATACACAGCCAATCTTTGCTGCTCAGCTCTTGCAGAATTTGCGTGCCCCTAA
Protein sequenceShow/hide protein sequence
MIKMESHPCSSLFLLLFLSILFVRAFTSKHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACP