; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G011780 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G011780
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionF-box/LRR-repeat 20
Genome locationCmo_Chr01:9593221..9598896
RNA-Seq ExpressionCmoCh01G011780
SyntenyCmoCh01G011780
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
InterPro domainsIPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139789.1 uncharacterized protein LOC101203553 [Cucumis sativus]5.8e-16582.29Show/hide
Query:  METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK
        METIEE  II+KTF KL+LNQK SS PT S+ F KS SLD    S FK T SQ SGTGL FERKK P+LVSLCVG+IGKHLEDII DLD ISA+FPSDVK
Subjt:  METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK

Query:  QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK
        QSI AIARRR+LL+DDV+ISL DSSWETLDVSGS+VSDFGL ++ +TCK LRAVDISRCNKITAAG+SELVQHCCSLETLRCGGCPRSD TARR LDIFK
Subjt:  QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK

Query:  PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP
        PRLDDIEGDSWE+LDTAEIANGAQSLRWLVWPK+D++SLE+FSTECPRIT+NPKPSPF F G++VP EALPNIALDEH IVDIDPKTWAV R T+RAP+ 
Subjt:  PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP

Query:  PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT
        P N+SELSLAEKFRLAF+ERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALAS+ASK+LQS T
Subjt:  PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT

XP_022941466.1 uncharacterized protein LOC111446756 [Cucurbita moschata]7.8e-202100Show/hide
Query:  METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK
        METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK
Subjt:  METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK

Query:  QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK
        QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK
Subjt:  QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK

Query:  PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP
        PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP
Subjt:  PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP

Query:  PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT
        PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT
Subjt:  PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT

XP_022981521.1 uncharacterized protein LOC111480610 [Cucurbita maxima]1.4e-19596.73Show/hide
Query:  METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK
        METIEETKIISKTFEKLNLNQK+SSKPTSSDPFAKSL LDSSH+SSFKAT SQSSGTG PFERKKTPSLVSLCVGL+GKHLEDIISDLDEISASFPSDVK
Subjt:  METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK

Query:  QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK
        QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKV QTCK LRAVDISRCNKITAAG+SELVQHCCSLETLRCGGCPRSDDTARRCLDIFK
Subjt:  QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK

Query:  PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP
        PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAF GRRVPREALPNIALDEHAIVDIDPKTWAVAR TSRAPVP
Subjt:  PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP

Query:  PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT
        PLNSSELSLAEKFRLAFLERDTRLAPKRAKN RQHQRRAEREWMTTSTRAKALALASKASKTLQSHT
Subjt:  PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT

XP_023525892.1 uncharacterized protein LOC111789373 [Cucurbita pepo subsp. pepo]1.9e-19597.28Show/hide
Query:  METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK
        METIEE KIISKTFEKLNLNQKFSSKPTSSDPFA+SLSLDSSH+SSFKAT SQSSGTGL FERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK
Subjt:  METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK

Query:  QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK
        QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVA+TCK LRAVDISRCNKITAAG+SELVQHCCSLETLRCGGCPRSDDTARRCLDIFK
Subjt:  QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK

Query:  PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP
        PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAF GRRVPREALPNIALDEHAIVDIDPKTWAVAR TSRAPVP
Subjt:  PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP

Query:  PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT
        PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT
Subjt:  PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT

XP_038896648.1 uncharacterized protein LOC120084911 [Benincasa hispida]2.7e-17083.92Show/hide
Query:  METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK
        MET++E KII+KTF KL+LNQK +SKP  S+PFA S SLD + +SSFK T SQSSGTGLPFERKK PSLVSLCVG+IGKHLEDII DLDEISA+FPSDVK
Subjt:  METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK

Query:  QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK
        +S+ A+ARRRKLLDDD++ISLADSSWETL+VSGS+VSDFGL +VA+TCK LRAVDISRCNKITAAG+SELVQHCCSLETLRCGGCPRSDDTARR LDIFK
Subjt:  QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK

Query:  PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP
        PRLDDIEGDSWE+LDTAEIANGAQSLRWLVWPKID++SLE+FSTECPRIT+NPKPSPF F G+RVP EALPNIALDEHAIVDI+P+TWAV R T++APV 
Subjt:  PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP

Query:  PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT
        P N SELSLAEKFRLAF+ERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKAL LAS+ASKTLQS T
Subjt:  PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT

TrEMBL top hitse value%identityAlignment
A0A0A0K5D7 Uncharacterized protein2.8e-16582.29Show/hide
Query:  METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK
        METIEE  II+KTF KL+LNQK SS PT S+ F KS SLD    S FK T SQ SGTGL FERKK P+LVSLCVG+IGKHLEDII DLD ISA+FPSDVK
Subjt:  METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK

Query:  QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK
        QSI AIARRR+LL+DDV+ISL DSSWETLDVSGS+VSDFGL ++ +TCK LRAVDISRCNKITAAG+SELVQHCCSLETLRCGGCPRSD TARR LDIFK
Subjt:  QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK

Query:  PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP
        PRLDDIEGDSWE+LDTAEIANGAQSLRWLVWPK+D++SLE+FSTECPRIT+NPKPSPF F G++VP EALPNIALDEH IVDIDPKTWAV R T+RAP+ 
Subjt:  PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP

Query:  PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT
        P N+SELSLAEKFRLAF+ERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALAS+ASK+LQS T
Subjt:  PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT

A0A1S3BJ08 uncharacterized protein LOC1034901391.1e-16181.47Show/hide
Query:  METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK
        METIEE K I+KTF KL+LNQK SS+PT S+ F KS S D   +S FK T SQ S   L FERKK P+LVSLCVG+IGKHLEDII DLDEISA+FPSDVK
Subjt:  METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK

Query:  QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK
        QSI A+ARRR+LL+DDV+ISL DSSWETLDVSGS+VSDFGL ++ +TCK LRAVDISRCNKITAAG+SELVQHCCSLETLRCGGCPRSD TARR LDIFK
Subjt:  QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK

Query:  PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP
        PRLDDIEGDSWE+LDTAEIANGAQSLRWLVWPKID++SLE+FSTECPRIT+NPKPSPF F G++VP EALPNIALDEH IVDIDPKTWAV R T RAP+ 
Subjt:  PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP

Query:  PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT
        P N SELSLAEKFRLAF+ERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALAS+ASK+LQS T
Subjt:  PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT

A0A6J1CE68 uncharacterized protein LOC1110104214.8e-16583.65Show/hide
Query:  METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK
        MET+EE KIISKT   L+LNQKF SKPT+SDPFAKS  LDS+ +SS K T   S  +GLPFERKKTPSLVSLCVG+IGK+LEDII DLDEISA+FPSDVK
Subjt:  METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK

Query:  QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK
        Q++ A+ARRRKLLDDDVVISLAD SWETLDVSGS+VSDFGL KVAQ CK LRAVDISRCNKITAAGISELVQHCCSLETLRCGGC RSDDT RRCLD+FK
Subjt:  QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK

Query:  PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP
        PRLDDIEGDSWE+LDTAE ANGAQSLRWLVWPKID++SLEMFS ECPRITVNPKPSPF F G RVP EA PNIALD+HAIVDIDPKTWAVAR  SRA V 
Subjt:  PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP

Query:  PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT
        P N SELSLAEKFRLAF+ERDTRLAPKRAKNARQHQRRAEREWMTTS RAKAL LAS+ASK LQS T
Subjt:  PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT

A0A6J1FL68 uncharacterized protein LOC1114467563.8e-202100Show/hide
Query:  METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK
        METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK
Subjt:  METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK

Query:  QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK
        QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK
Subjt:  QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK

Query:  PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP
        PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP
Subjt:  PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP

Query:  PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT
        PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT
Subjt:  PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT

A0A6J1IWS7 uncharacterized protein LOC1114806106.9e-19696.73Show/hide
Query:  METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK
        METIEETKIISKTFEKLNLNQK+SSKPTSSDPFAKSL LDSSH+SSFKAT SQSSGTG PFERKKTPSLVSLCVGL+GKHLEDIISDLDEISASFPSDVK
Subjt:  METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVK

Query:  QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK
        QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKV QTCK LRAVDISRCNKITAAG+SELVQHCCSLETLRCGGCPRSDDTARRCLDIFK
Subjt:  QSITAIARRRKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFK

Query:  PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP
        PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAF GRRVPREALPNIALDEHAIVDIDPKTWAVAR TSRAPVP
Subjt:  PRLDDIEGDSWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVP

Query:  PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT
        PLNSSELSLAEKFRLAFLERDTRLAPKRAKN RQHQRRAEREWMTTSTRAKALALASKASKTLQSHT
Subjt:  PLNSSELSLAEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT

SwissProt top hitse value%identityAlignment
Q0VD31 F-box/LRR-repeat protein 49.2e-0431.37Show/hide
Query:  VSDFGLT--KVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFKPRLDDIE------GDSWEDLDTAEIANGAQSLR
        + D+ +T   +   CK LR +D+ RC  IT +GI+EL   C  LE L  G CP +  ++  C      +L +++        S  D D  E+A+    LR
Subjt:  VSDFGLT--KVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFKPRLDDIE------GDSWEDLDTAEIANGAQSLR

Query:  WL
         L
Subjt:  WL

Q58DG6 F-box/LRR-repeat protein 205.4e-0425.4Show/hide
Query:  SGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFKPRLDDIEGDSW---EDLDTAEIANGAQSLRW
        S + +++  L  +++ C LL  ++IS C+++T  GI  LV+ C  L+ L   GC + +D A + +    P L  +   +     D     I  G   L+ 
Subjt:  SGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFKPRLDDIEGDSW---EDLDTAEIANGAQSLRW

Query:  LV---WPKIDENSLEMFSTECPRITV
        L       I +  L      CPR+ +
Subjt:  LV---WPKIDENSLEMFSTECPRITV

Q708Y0 EIN3-binding F-box protein 21.9e-0432.35Show/hide
Query:  VSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDD-----TARRCLDI
        VSD GL+++A++C ++  +D+SRC  IT +G+  + ++C +L  L    C    +      ARRC+++
Subjt:  VSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDD-----TARRCLDI

Q96IG2 F-box/LRR-repeat protein 205.4e-0425.4Show/hide
Query:  SGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFKPRLDDIEGDSW---EDLDTAEIANGAQSLRW
        S + +++  L  +++ C LL  ++IS C+++T  GI  LV+ C  L+ L   GC + +D A + +    P L  +   +     D     I  G   L+ 
Subjt:  SGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFKPRLDDIEGDSW---EDLDTAEIANGAQSLRW

Query:  LV---WPKIDENSLEMFSTECPRITV
        L       I +  L      CPR+ +
Subjt:  LV---WPKIDENSLEMFSTECPRITV

Q9CZV8 F-box/LRR-repeat protein 205.4e-0425.4Show/hide
Query:  SGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFKPRLDDIEGDSW---EDLDTAEIANGAQSLRW
        S + +++  L  +++ C LL  ++IS C+++T  GI  LV+ C  L+ L   GC + +D A + +    P L  +   +     D     I  G   L+ 
Subjt:  SGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFKPRLDDIEGDSW---EDLDTAEIANGAQSLRW

Query:  LV---WPKIDENSLEMFSTECPRITV
        L       I +  L      CPR+ +
Subjt:  LV---WPKIDENSLEMFSTECPRITV

Arabidopsis top hitse value%identityAlignment
AT4G26980.1 RNI-like superfamily protein4.2e-11360.73Show/hide
Query:  ISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVKQSITAIARR
        + K+ + L+LN      P       ++  L S++ SS + +P +S          K PSLVS C+G+IGKHLED+I  L EIS  FP+D+K SI AIARR
Subjt:  ISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVKQSITAIARR

Query:  RKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFKPRLDDIEGD
        +KLLDDDV+I LADSSWE LDVSGSDV++FGL KVA+ CK LRAVDISRCNKI++ G+ ELVQHC SLETLRCGGCP S+ TARR L IFKP L ++EG+
Subjt:  RKLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFKPRLDDIEGD

Query:  SWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVPPLNSSELSL
        +WE++DT+EI +G QSLRWLVWP+ID++SLEM S+ECPRI VNPKPS  A+    VPREALP++ALDE  + DIDPKTW V     +    PL S+ELS+
Subjt:  SWEDLDTAEIANGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVPPLNSSELSL

Query:  AEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTL
        AEKFRLAF ERD R+APKRAKNARQ QRRAER+WM +S  AKA+  ASKA+++L
Subjt:  AEKFRLAFLERDTRLAPKRAKNARQHQRRAEREWMTTSTRAKALALASKASKTL

AT5G25350.1 EIN3-binding F box protein 21.3e-0532.35Show/hide
Query:  VSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDD-----TARRCLDI
        VSD GL+++A++C ++  +D+SRC  IT +G+  + ++C +L  L    C    +      ARRC+++
Subjt:  VSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDD-----TARRCLDI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACAATCGAAGAAACGAAGATCATTTCGAAAACTTTTGAGAAGCTTAATTTGAATCAGAAATTCAGTTCCAAGCCTACTTCTTCTGATCCTTTTGCTAAATCTTT
ATCTCTCGATTCGAGTCACGAATCCAGTTTCAAGGCTACTCCTTCTCAATCCTCCGGAACAGGATTGCCCTTTGAGAGGAAGAAAACTCCGAGTTTAGTCAGTTTGTGCG
TTGGACTTATTGGCAAGCATTTGGAGGATATAATTTCTGACTTGGATGAGATTAGTGCCAGCTTTCCATCAGATGTGAAGCAATCAATAACGGCAATTGCCCGAAGAAGG
AAATTACTGGATGATGATGTTGTCATCTCCTTAGCAGATAGTTCGTGGGAAACACTCGATGTCTCTGGTTCAGATGTTTCTGATTTTGGATTAACAAAAGTTGCGCAGAC
GTGTAAACTTCTTAGAGCTGTGGATATAAGTCGATGCAACAAGATTACAGCTGCTGGTATTTCTGAGCTCGTCCAGCATTGTTGCTCTTTGGAGACACTTCGTTGCGGAG
GGTGCCCGAGGAGTGATGATACGGCACGAAGGTGCTTGGATATATTTAAACCAAGGCTGGATGATATAGAAGGAGATTCATGGGAGGATCTTGATACAGCTGAAATTGCT
AATGGGGCACAATCACTTCGGTGGTTGGTCTGGCCAAAAATAGACGAAAATTCCTTGGAGATGTTCTCCACAGAGTGCCCACGCATCACAGTTAATCCGAAGCCATCACC
GTTTGCTTTCAGTGGGAGGCGAGTTCCAAGGGAAGCATTGCCAAATATCGCGTTGGATGAACACGCCATTGTCGATATCGACCCCAAAACATGGGCAGTGGCTAGATGCA
CGTCGAGGGCTCCAGTTCCTCCATTGAATTCCTCAGAATTGTCTTTGGCTGAAAAATTCAGGCTTGCATTCCTGGAAAGGGACACTCGCTTAGCTCCTAAACGAGCTAAA
AATGCGAGGCAACATCAAAGACGTGCGGAGAGGGAGTGGATGACAACGAGTACAAGAGCCAAGGCACTGGCCTTGGCCTCTAAAGCAAGTAAAACTTTGCAGAGTCACAC
ATAG
mRNA sequenceShow/hide mRNA sequence
TCCCGTCAATGCTTTCTTCTTTTCGTTCATTTTTTTTCTAACGATTTCTGCTCGTCTCCCCAATCCTTCAATTTTTGATGGAAACAATCGAAGAAACGAAGATCATTTCG
AAAACTTTTGAGAAGCTTAATTTGAATCAGAAATTCAGTTCCAAGCCTACTTCTTCTGATCCTTTTGCTAAATCTTTATCTCTCGATTCGAGTCACGAATCCAGTTTCAA
GGCTACTCCTTCTCAATCCTCCGGAACAGGATTGCCCTTTGAGAGGAAGAAAACTCCGAGTTTAGTCAGTTTGTGCGTTGGACTTATTGGCAAGCATTTGGAGGATATAA
TTTCTGACTTGGATGAGATTAGTGCCAGCTTTCCATCAGATGTGAAGCAATCAATAACGGCAATTGCCCGAAGAAGGAAATTACTGGATGATGATGTTGTCATCTCCTTA
GCAGATAGTTCGTGGGAAACACTCGATGTCTCTGGTTCAGATGTTTCTGATTTTGGATTAACAAAAGTTGCGCAGACGTGTAAACTTCTTAGAGCTGTGGATATAAGTCG
ATGCAACAAGATTACAGCTGCTGGTATTTCTGAGCTCGTCCAGCATTGTTGCTCTTTGGAGACACTTCGTTGCGGAGGGTGCCCGAGGAGTGATGATACGGCACGAAGGT
GCTTGGATATATTTAAACCAAGGCTGGATGATATAGAAGGAGATTCATGGGAGGATCTTGATACAGCTGAAATTGCTAATGGGGCACAATCACTTCGGTGGTTGGTCTGG
CCAAAAATAGACGAAAATTCCTTGGAGATGTTCTCCACAGAGTGCCCACGCATCACAGTTAATCCGAAGCCATCACCGTTTGCTTTCAGTGGGAGGCGAGTTCCAAGGGA
AGCATTGCCAAATATCGCGTTGGATGAACACGCCATTGTCGATATCGACCCCAAAACATGGGCAGTGGCTAGATGCACGTCGAGGGCTCCAGTTCCTCCATTGAATTCCT
CAGAATTGTCTTTGGCTGAAAAATTCAGGCTTGCATTCCTGGAAAGGGACACTCGCTTAGCTCCTAAACGAGCTAAAAATGCGAGGCAACATCAAAGACGTGCGGAGAGG
GAGTGGATGACAACGAGTACAAGAGCCAAGGCACTGGCCTTGGCCTCTAAAGCAAGTAAAACTTTGCAGAGTCACACATAGCTTCTACTGTTTCTCTTTACGTTTTCATT
ATTCAGAACATACAATGCCTTACTTATATAAGATTGTGAGATAAAATCCTATGTACAACACAGTTTTTCAAGACTGATAAAGATTCATCTAGCTCGCCTATGCTCGAGAA
TGGCGTTTGCGTGTATATCGTTTGAGATAGGGAACAAGGTATGAGCTTTACCTTGAAAACGAGTAAGTCTGTGGCCTGGTTTTGCTACGAAGATGAGCCAAATGAAAACG
AGTTTCACATTGTATTTTGGAATTTAGAAACTCGATTATGATCGACTCTAGAAGTACATGAACGACCGAATATGGTTCCCGGTTCAAAGTTTATGGAAAGTACTTCTATT
TGGTTCCCGG
Protein sequenceShow/hide protein sequence
METIEETKIISKTFEKLNLNQKFSSKPTSSDPFAKSLSLDSSHESSFKATPSQSSGTGLPFERKKTPSLVSLCVGLIGKHLEDIISDLDEISASFPSDVKQSITAIARRR
KLLDDDVVISLADSSWETLDVSGSDVSDFGLTKVAQTCKLLRAVDISRCNKITAAGISELVQHCCSLETLRCGGCPRSDDTARRCLDIFKPRLDDIEGDSWEDLDTAEIA
NGAQSLRWLVWPKIDENSLEMFSTECPRITVNPKPSPFAFSGRRVPREALPNIALDEHAIVDIDPKTWAVARCTSRAPVPPLNSSELSLAEKFRLAFLERDTRLAPKRAK
NARQHQRRAEREWMTTSTRAKALALASKASKTLQSHT