; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G011800 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G011800
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein translation factor SUI1 homolog
Genome locationCmo_Chr01:9608583..9609570
RNA-Seq ExpressionCmoCh01G011800
SyntenyCmoCh01G011800
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsIPR001950 - SUI1 domain
IPR005874 - Eukaryotic translation initiation factor SUI1
IPR036877 - SUI1 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025154.1 SUI1 domain-containing protein [Cucumis melo var. makuwa]6.7e-5689.06Show/hide
Query:  DSVIVG-VRVLIQTRLMVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQL
        DS + G V+V IQ+R MVE+D QIPSA+DPFADAKDSDAPG KEYVHIRVQQRNGKKCLTTVQGLKK+FSYEKILKDVKKEFCCNGNVVQDKELGKIIQL
Subjt:  DSVIVG-VRVLIQTRLMVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQL

Query:  QGDQRKNVSQFLVQAGIVKKDQIKIHGF
        QGDQRKNVSQFLVQAG+VKKDQIKIHGF
Subjt:  QGDQRKNVSQFLVQAGIVKKDQIKIHGF

KAF3453464.1 hypothetical protein FNV43_RR03904 [Rhamnella rubrinervis]1.1e-5394.64Show/hide
Query:  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
        MVE+D QIPSA+DPFA+AKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKD+KKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
Subjt:  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG

Query:  IVKKDQIKIHGF
        I+KKDQIKIHGF
Subjt:  IVKKDQIKIHGF

KAG6607799.1 AUGMIN subunit 4, partial [Cucurbita argyrosperma subsp. sororia]2.8e-6293.28Show/hide
Query:  DSRLACLDSVIVGVRVLIQTRLMVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKEL
        +S+L     +IVGVRVLIQTRLMVEIDVQIPSAYDPFADA+DSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKEL
Subjt:  DSRLACLDSVIVGVRVLIQTRLMVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKEL

Query:  GKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF
        GKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF
Subjt:  GKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF

KAG7015195.1 Protein translation factor SUI1-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-7195.33Show/hide
Query:  RLGLSLYRPDSRLACLDSV-------IVGVRVLIQTRLMVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDV
        RLGLSLYRPDSRLACLDSV       IVGVRVLIQTRLMVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDV
Subjt:  RLGLSLYRPDSRLACLDSV-------IVGVRVLIQTRLMVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDV

Query:  KKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF
        KKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF
Subjt:  KKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF

XP_022940170.1 protein translation factor SUI1 homolog 2-like [Cucurbita moschata]3.9e-56100Show/hide
Query:  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
        MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
Subjt:  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG

Query:  IVKKDQIKIHGF
        IVKKDQIKIHGF
Subjt:  IVKKDQIKIHGF

TrEMBL top hitse value%identityAlignment
A0A0A0K771 SUI1 domain-containing protein1.5e-5394.64Show/hide
Query:  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
        MVE+D QIPSA+DPFADAKDSDAPG KEYVHIRVQQRNGKKCLTTVQGLKK+FSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
Subjt:  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG

Query:  IVKKDQIKIHGF
        +VKKDQIKIHGF
Subjt:  IVKKDQIKIHGF

A0A1S3BI45 protein translation factor SUI1 homolog 1-like1.5e-5394.64Show/hide
Query:  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
        MVE+D QIPSA+DPFADAKDSDAPG KEYVHIRVQQRNGKKCLTTVQGLKK+FSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
Subjt:  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG

Query:  IVKKDQIKIHGF
        +VKKDQIKIHGF
Subjt:  IVKKDQIKIHGF

A0A5D3DHR8 SUI1 domain-containing protein3.3e-5689.06Show/hide
Query:  DSVIVG-VRVLIQTRLMVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQL
        DS + G V+V IQ+R MVE+D QIPSA+DPFADAKDSDAPG KEYVHIRVQQRNGKKCLTTVQGLKK+FSYEKILKDVKKEFCCNGNVVQDKELGKIIQL
Subjt:  DSVIVG-VRVLIQTRLMVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQL

Query:  QGDQRKNVSQFLVQAGIVKKDQIKIHGF
        QGDQRKNVSQFLVQAG+VKKDQIKIHGF
Subjt:  QGDQRKNVSQFLVQAGIVKKDQIKIHGF

A0A6J1FPT4 protein translation factor SUI1 homolog 2-like1.9e-56100Show/hide
Query:  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
        MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
Subjt:  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG

Query:  IVKKDQIKIHGF
        IVKKDQIKIHGF
Subjt:  IVKKDQIKIHGF

A0A6J1IX56 protein translation factor SUI1 homolog 2-like1.9e-56100Show/hide
Query:  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
        MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
Subjt:  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG

Query:  IVKKDQIKIHGF
        IVKKDQIKIHGF
Subjt:  IVKKDQIKIHGF

SwissProt top hitse value%identityAlignment
A6MZM2 Protein translation factor SUI1 homolog4.7e-4473.91Show/hide
Query:  MVEIDVQIPSAYDPFADAKDSD---APGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV
        M ++D+QIP+A+DPFA+A   D   A G K+YVH+R+QQRNG+K LTTVQGLKK+FSY KILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLV
Subjt:  MVEIDVQIPSAYDPFADAKDSD---APGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV

Query:  QAGIVKKDQIKIHGF
        QAGIVKK+ IKIHGF
Subjt:  QAGIVKKDQIKIHGF

P41568 Protein translation factor SUI1 homolog 12.7e-4476.99Show/hide
Query:  MVEIDVQIPSAYDPFADAKDSDAPGG-KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA
        M E+D Q+P+A+DPFADA   D+  G KEYVHIRVQQRNG+K LTTVQGLKK++SY KILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQA
Subjt:  MVEIDVQIPSAYDPFADAKDSDAPGG-KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA

Query:  GIVKKDQIKIHGF
        G+VKKD IKIHGF
Subjt:  GIVKKDQIKIHGF

P56330 Protein translation factor SUI1 homolog4.7e-4473.91Show/hide
Query:  MVEIDVQIPSAYDPFADAKDSD---APGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV
        M ++D+QIP+A+DPFA+A   D   A G K+YVH+R+QQRNG+K LTTVQGLKK+FSY KILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLV
Subjt:  MVEIDVQIPSAYDPFADAKDSD---APGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV

Query:  QAGIVKKDQIKIHGF
        QAGIVKK+ IKIHGF
Subjt:  QAGIVKKDQIKIHGF

Q0D5W6 Protein translation factor SUI1 homolog4.7e-4473.91Show/hide
Query:  MVEIDVQIPSAYDPFADAKDSD---APGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV
        M ++D+QIP+A+DPFA+A   D   A G K+YVH+R+QQRNG+K LTTVQGLKK+FSY KILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLV
Subjt:  MVEIDVQIPSAYDPFADAKDSD---APGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV

Query:  QAGIVKKDQIKIHGF
        QAGIVKK+ IKIHGF
Subjt:  QAGIVKKDQIKIHGF

Q94JV4 Protein translation factor SUI1 homolog 22.7e-4476.11Show/hide
Query:  MVEIDVQIPSAYDPFADAKDSDAPGG-KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA
        M +++VQ+P+A+DPFADA   D+  G KEYVHIRVQQRNG+K LTTVQGLKK++SY KILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQA
Subjt:  MVEIDVQIPSAYDPFADAKDSDAPGG-KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA

Query:  GIVKKDQIKIHGF
        G+VKKD IKIHGF
Subjt:  GIVKKDQIKIHGF

Arabidopsis top hitse value%identityAlignment
AT1G54290.1 Translation initiation factor SUI1 family protein2.0e-4576.11Show/hide
Query:  MVEIDVQIPSAYDPFADAKDSDAPGG-KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA
        M +++VQ+P+A+DPFADA   D+  G KEYVHIRVQQRNG+K LTTVQGLKK++SY KILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQA
Subjt:  MVEIDVQIPSAYDPFADAKDSDAPGG-KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA

Query:  GIVKKDQIKIHGF
        G+VKKD IKIHGF
Subjt:  GIVKKDQIKIHGF

AT4G27130.1 Translation initiation factor SUI1 family protein2.0e-4576.99Show/hide
Query:  MVEIDVQIPSAYDPFADAKDSDAPGG-KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA
        M E+D Q+P+A+DPFADA   D+  G KEYVHIRVQQRNG+K LTTVQGLKK++SY KILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQA
Subjt:  MVEIDVQIPSAYDPFADAKDSDAPGG-KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA

Query:  GIVKKDQIKIHGF
        G+VKKD IKIHGF
Subjt:  GIVKKDQIKIHGF

AT5G54760.1 Translation initiation factor SUI1 family protein2.6e-4576.99Show/hide
Query:  MVEIDVQIPSAYDPFADAKDSDAPGG-KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA
        M E+D Q+P+A+DPFADA   D+  G KEYVHIRVQQRNG+K LTTVQGLKK++SY KILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQA
Subjt:  MVEIDVQIPSAYDPFADAKDSDAPGG-KEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQA

Query:  GIVKKDQIKIHGF
        G+VKKD IKIHGF
Subjt:  GIVKKDQIKIHGF

AT5G54940.1 Translation initiation factor SUI1 family protein9.7e-5385.71Show/hide
Query:  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
        MVE+D+QIPSAYDPFA+AKDSDAPG KE +HIR+QQRNGKK LTTVQGLKK++SYE+ILKD+KK+FCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ G
Subjt:  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG

Query:  IVKKDQIKIHGF
        I KKDQIKIHGF
Subjt:  IVKKDQIKIHGF

AT5G54940.2 Translation initiation factor SUI1 family protein9.7e-5385.71Show/hide
Query:  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG
        MVE+D+QIPSAYDPFA+AKDSDAPG KE +HIR+QQRNGKK LTTVQGLKK++SYE+ILKD+KK+FCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ G
Subjt:  MVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAG

Query:  IVKKDQIKIHGF
        I KKDQIKIHGF
Subjt:  IVKKDQIKIHGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAGATTGGGTCTTAGTTTGTATCGGCCGGATTCTCGTCTTGCTTGTTTAGATTCTGTTATTGTGGGTGTTCGAGTTTTGATCCAAACAAGGTTGATGGTTGAAAT
AGACGTCCAAATCCCATCCGCTTACGATCCATTCGCAGACGCCAAGGATTCCGATGCCCCGGGAGGCAAAGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGA
AGTGCTTGACAACAGTCCAGGGTCTGAAGAAGGATTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTTTGCTGTAATGGTAACGTCGTCCAAGACAAAGAA
TTGGGGAAGATAATTCAGCTTCAGGGCGATCAGCGCAAGAACGTGTCTCAGTTCCTGGTTCAGGCTGGGATTGTTAAGAAGGATCAGATCAAAATCCATGGATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTAGATTGGGTCTTAGTTTGTATCGGCCGGATTCTCGTCTTGCTTGTTTAGATTCTGTTATTGTGGGTGTTCGAGTTTTGATCCAAACAAGGTTGATGGTTGAAAT
AGACGTCCAAATCCCATCCGCTTACGATCCATTCGCAGACGCCAAGGATTCCGATGCCCCGGGAGGCAAAGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGA
AGTGCTTGACAACAGTCCAGGGTCTGAAGAAGGATTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTTTGCTGTAATGGTAACGTCGTCCAAGACAAAGAA
TTGGGGAAGATAATTCAGCTTCAGGGCGATCAGCGCAAGAACGTGTCTCAGTTCCTGGTTCAGGCTGGGATTGTTAAGAAGGATCAGATCAAAATCCATGGATTTTAAGC
AACTTGTTTTATAGTTCATCGAATTGAATCTGTTTCTGTGTTTTCTTTTGAATGGATCTTGGGATGGCGGACTGTAATGACAACTTGTTAGCAATAAAATGTTTGATTCT
GGGTAACTTTTGTGGTCTTTCATGTTCTTAGCAGGATGTTTCAAGCTTTAATCTCTCTTGAGATTGTTTTGAATCATGTTCTTGCGGAAGTTTCA
Protein sequenceShow/hide protein sequence
MFRLGLSLYRPDSRLACLDSVIVGVRVLIQTRLMVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKE
LGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF