CuGenDBv2

Gene ID	CmoCh01G011890
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	DNA replication regulator sld2 like
Genome location	Cmo_Chr01:9658833..9659339
RNA-Seq Expression	CmoCh01G011890
Synteny	CmoCh01G011890
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7015205.1 hypothetical protein SDJN02_22838, partial [Cucurbita argyrosperma subsp. argyrosperma]

9.7e-83

99.4

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Query:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGS
        MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSASS AASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGS
Subjt:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGS

Query:  RDVHRIPMLGSDTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
        RDVHRIPMLGSDTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
Subjt:  RDVHRIPMLGSDTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA

XP_022139743.1 uncharacterized protein LOC111010581 [Momordica charantia]

2.3e-60

76.74

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Query:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNK--SSSATSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAA
        M  KLQS KGGGGSIKVGATGTISSLM RELE+MRSGP+K V SKNK  SS+ T+++S AASIPKRLQQS+S DEV+NGRRY++VN+RSFGNSHN+TK +
Subjt:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNK--SSSATSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAA

Query:  GSRDVHRIPMLGSDTHANE--NGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
         SRDVHR+PMLGS+ +  +  N YR KPERKGLRAVAIVDVKCNNPD+AWASRPLS+RLRKLGF+KLSETFA
Subjt:  GSRDVHRIPMLGSDTHANE--NGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA

XP_022940165.1 uncharacterized protein LOC111445874 [Cucurbita moschata]

1.2e-83

100

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Query:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGS
        MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGS
Subjt:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGS

Query:  RDVHRIPMLGSDTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
        RDVHRIPMLGSDTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
Subjt:  RDVHRIPMLGSDTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA

XP_022981635.1 uncharacterized protein LOC111480697 [Cucurbita maxima]

5.3e-81

97.62

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Query:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGS
        MVLK QSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNK SSATSASS AASIPKRLQQ+KSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGS
Subjt:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGS

Query:  RDVHRIPMLGSDTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
        RDVHRIPMLGSDTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
Subjt:  RDVHRIPMLGSDTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA

XP_023523864.1 uncharacterized protein LOC111787980 [Cucurbita pepo subsp. pepo]

5.9e-80

95.83

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Query:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGS
        MVLK QSTKGGGGSIKVGATGTISSLMTRELETMR+GP+KLVTSKNKSSSATSASS AASIPKRLQQ+KSFDEVNNGRRY+TVNSRSFGNSHNTTKA GS
Subjt:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGS

Query:  RDVHRIPMLGSDTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
        RDVHRIPMLGSDTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
Subjt:  RDVHRIPMLGSDTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAQ8 Uncharacterized protein

4.0e-58

78.36

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Query:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSA--TSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAA
        MV KLQ  KGGGGS+KVGATGTISSLM RELE+MRS  KK VTSKNKSSSA  T+  S AASIPKRL QSKSF EV++ RRY++VN+RSFGNSHN TK  
Subjt:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSA--TSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAA

Query:  GSRDVHRIPMLGS-DTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
        GSRDVHR+PML S D + + N YR+KPERKGLRAVAIVDVKCNNPD+AWASRPLSSRLRKLGFSKLSETFA
Subjt:  GSRDVHRIPMLGS-DTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA

A0A5D3B9E2 Uncharacterized protein

5.3e-58

77.91

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Query:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSAS---SFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKA
        MV KLQ  KGGGGSIKVGATGTISSLM RELE+MRS  KK VTSKNKSSSAT+ +   S A SIPKRL QSKSF EV++ RRY++VN+RSFGNSHN TK 
Subjt:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSAS---SFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKA

Query:  AGSRDVHRIPMLGS-DTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
         GSRDVHR+PML S D + + N YR+KPERKGLRAVAIVDVKCNNPD+AWASRPLSSRLRKLGFSKLSETFA
Subjt:  AGSRDVHRIPMLGS-DTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA

A0A6J1CGE9 uncharacterized protein LOC111010581

1.1e-60

76.74

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Query:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNK--SSSATSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAA
        M  KLQS KGGGGSIKVGATGTISSLM RELE+MRSGP+K V SKNK  SS+ T+++S AASIPKRLQQS+S DEV+NGRRY++VN+RSFGNSHN+TK +
Subjt:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNK--SSSATSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAA

Query:  GSRDVHRIPMLGSDTHANE--NGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
         SRDVHR+PMLGS+ +  +  N YR KPERKGLRAVAIVDVKCNNPD+AWASRPLS+RLRKLGF+KLSETFA
Subjt:  GSRDVHRIPMLGSDTHANE--NGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA

A0A6J1FHN9 uncharacterized protein LOC111445874

5.6e-84

100

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Query:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGS
        MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGS
Subjt:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGS

Query:  RDVHRIPMLGSDTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
        RDVHRIPMLGSDTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
Subjt:  RDVHRIPMLGSDTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA

A0A6J1IX41 uncharacterized protein LOC111480697

2.6e-81

97.62

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Query:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGS
        MVLK QSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNK SSATSASS AASIPKRLQQ+KSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGS
Subjt:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGS

Query:  RDVHRIPMLGSDTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
        RDVHRIPMLGSDTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA
Subjt:  RDVHRIPMLGSDTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G54850.1 unknown protein

2.9e-24

39.8

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Query:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMR-SGPKKLVTSKNKSSSATSAS-SFAASIPKRLQQSKSFDE------VNN-----GRRYSTVNSRS
        MV KL+  KGGGGSIK+GATGT+++LMTREL++M+ + PK   T   +++   S     ++S P+R +  KS DE      VNN     G    T +  S
Subjt:  MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMR-SGPKKLVTSKNKSSSATSAS-SFAASIPKRLQQSKSFDE------VNN-----GRRYSTVNSRS

Query:  FGNSHN--TTKAAGSRDVHRIPMLGSDTHANENGYRD-------------------KPER-KGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSE
           S N  T+K   ++ +H++ MLGSD      G+ +                    P R K +  V IVDVKC NPD+AWA+ P++SRL+KLGFSKL+E
Subjt:  FGNSHN--TTKAAGSRDVHRIPMLGSDTHANENGYRD-------------------KPER-KGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSE

Query:  T
        +
Subjt:  T

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTTCTAAAACTGCAATCTACCAAAGGTGGCGGAGGATCCATCAAGGTTGGAGCGACCGGAACGATTAGTTCGTTGATGACAAGGGAATTAGAGACGATGAGATCCGG
CCCCAAGAAGTTGGTCACGTCCAAAAACAAATCTTCATCAGCTACTTCAGCTAGTTCATTTGCTGCTTCCATTCCTAAAAGACTGCAACAAAGCAAATCATTTGATGAGG
TAAACAATGGTAGAAGATATAGTACTGTTAATAGCAGAAGCTTTGGGAACTCTCATAACACTACTAAGGCCGCTGGTTCGAGGGATGTCCACCGGATACCAATGCTTGGT
TCTGATACTCATGCCAATGAAAATGGCTATAGAGACAAACCAGAAAGGAAAGGACTTAGAGCAGTTGCAATTGTGGACGTAAAGTGCAATAACCCTGATAAAGCTTGGGC
TAGCCGTCCTCTATCAAGTCGACTCCGAAAACTCGGGTTTTCGAAGCTGTCTGAAACCTTTGCTTGA

mRNA sequence

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Protein sequence

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MVLKLQSTKGGGGSIKVGATGTISSLMTRELETMRSGPKKLVTSKNKSSSATSASSFAASIPKRLQQSKSFDEVNNGRRYSTVNSRSFGNSHNTTKAAGSRDVHRIPMLG
SDTHANENGYRDKPERKGLRAVAIVDVKCNNPDKAWASRPLSSRLRKLGFSKLSETFA

CmoCh01G011890 (gene) of Cucurbita moschata (Rifu) v1 genome