CuGenDBv2

Gene ID	CmoCh01G012020
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like
Genome location	Cmo_Chr01:9735069..9739514
RNA-Seq Expression	CmoCh01G012020
Synteny	CmoCh01G012020
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6607819.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]

6.6e-215

98.98

Show/hide

Query:  MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC
        MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKA DKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC
Subjt:  MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC

Query:  EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
        EG SVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRF+QLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
Subjt:  EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC

Query:  LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH
        LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH
Subjt:  LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH

Query:  DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV
        DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLA+
Subjt:  DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV

KAG7015217.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.9e-214

98.72

Show/hide

Query:  MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC
        MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKA DKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC
Subjt:  MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC

Query:  EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
        EG SVRSPDAQENGDENSLKQLLDIPWFSN+SNHSISLRRREISRERKQKWIFKNSQNYRF+QLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
Subjt:  EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC

Query:  LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH
        LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH
Subjt:  LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH

Query:  DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV
        DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLA+
Subjt:  DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV

XP_022940187.1 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1 [Cucurbita moschata]

7.1e-217

99.74

Show/hide

Query:  MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC
        MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC
Subjt:  MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC

Query:  EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
        EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
Subjt:  EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC

Query:  LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH
        LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH
Subjt:  LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH

Query:  DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV
        DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLA+
Subjt:  DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV

XP_022940188.1 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X2 [Cucurbita moschata]

6.6e-215

99.49

Show/hide

Query:  MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC
        MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC
Subjt:  MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC

Query:  EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
         GSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
Subjt:  EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC

Query:  LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH
        LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH
Subjt:  LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH

Query:  DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV
        DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLA+
Subjt:  DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV

XP_023524928.1 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo]

3.3e-214

98.47

Show/hide

Query:  MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC
        MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKA DKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC
Subjt:  MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC

Query:  EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
        EGSSVRSP+AQENGDENSLKQLLDIPWFSNMSN+SISLRRREISRERKQKWIFKNSQNYRF+QLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
Subjt:  EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC

Query:  LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH
        LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH
Subjt:  LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH

Query:  DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV
        DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAAN+FKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLA+
Subjt:  DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CCQ2 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like

2.7e-185

85.2

Show/hide

Query:  MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC
        M SKSKNLSSLFRSAI ASKPSQN QDAALK+YVS IDPFSPSTSLSKA D R IKSANSKK PQKLNSDVQFPAL+LEEPSGSGDSMKHLTKAISSILC
Subjt:  MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC

Query:  EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
        EGSSV S DAQ NGD+ S+++LLDIPWFS +SNHSIS RRREISRERKQKWIFK+SQ+ RFN+LVRNCAQKLGTDVTLEVFGKLGRETGVKEYNAL+DIC
Subjt:  EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC

Query:  LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH
        LEKAKTSKD+E+VLEQIAKVYQLFKLMKE GFQ+EDETYGPVLTYLI+MDMMEEF+FFCEA+KDG+PGS SRLGYYEMLFYVKIND EK+QELC+HA  +
Subjt:  LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH

Query:  DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV
        DGVDKY+LQENYLLALCECEQK E+LQMLEI+DITKLSSTVLA N+F+CL RL LHS AEKLLVA KTSG GA NIPYLIY++ VSIPNLA+
Subjt:  DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV

A0A6J1FIW6 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1

3.4e-217

99.74

Show/hide

Query:  MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC
        MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC
Subjt:  MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC

Query:  EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
        EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
Subjt:  EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC

Query:  LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH
        LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH
Subjt:  LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH

Query:  DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV
        DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLA+
Subjt:  DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV

A0A6J1FNL3 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X2

3.2e-215

99.49

Show/hide

Query:  MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC
        MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC
Subjt:  MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC

Query:  EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
         GSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
Subjt:  EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC

Query:  LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH
        LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH
Subjt:  LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH

Query:  DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV
        DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLA+
Subjt:  DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV

A0A6J1ITU1 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1

3.0e-213

97.7

Show/hide

Query:  MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC
        MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKA DKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC
Subjt:  MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC

Query:  EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
        EGSSVRSPDAQENGDENSLKQLLDIPWFSN+SNHSISLRRREISRERKQKWIFKNSQNYRF+QLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
Subjt:  EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC

Query:  LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH
        LEKAKTSKDLEVVLE IAKVYQLFKLMKEHGFQLEDETYGPVL YLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHA AH
Subjt:  LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH

Query:  DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV
        DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKL+STVLAAN+FKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLA+
Subjt:  DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV

A0A6J1J1Y5 pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X2

2.8e-211

97.45

Show/hide

Query:  MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC
        MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKA DKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC
Subjt:  MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILC

Query:  EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
         GSSVRSPDAQENGDENSLKQLLDIPWFSN+SNHSISLRRREISRERKQKWIFKNSQNYRF+QLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC
Subjt:  EGSSVRSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDIC

Query:  LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH
        LEKAKTSKDLEVVLE IAKVYQLFKLMKEHGFQLEDETYGPVL YLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHA AH
Subjt:  LEKAKTSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAH

Query:  DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV
        DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKL+STVLAAN+FKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLA+
Subjt:  DGVDKYSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV

SwissProt top hits

e value

%identity

Alignment

O49711 Pentatricopeptide repeat-containing protein At4g21880, mitochondrial

4.7e-46

33.51

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Query:  KNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILCEGSSV
        K+LS++FR A+  +  +   +  A+       D    S SL   F    + S  S +    +  D   PA               L   +SS L   S  
Subjt:  KNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILCEGSSV

Query:  RSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDICLEKAK
         +   + NG++   K +L+     +    S S + ++ SR R     ++N Q+    +L + C +KLGT+   EV  K+G+E G KEYNA+  +C+++A+
Subjt:  RSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDICLEKAK

Query:  TSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAHDGVDK
         S D E  L+QI K  +  K M++ GF + +  YGP   YL+DM+M+ EF    + +K+  P S  RL YYEML ++++ND EKI +LC + +   G+  
Subjt:  TSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAHDGVDK

Query:  YSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALK-TSGNGAENIPYLIYNHVVSIPNLAV
          LQE YL+ALCE + KE   ++LEIVDIT +SS     ++F  LG+ LL S+A KLL  L+    +G E +  LI+++   IPN  V
Subjt:  YSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALK-TSGNGAENIPYLIYNHVVSIPNLAV

Q6NQ81 Pentatricopeptide repeat-containing protein At4g04790, mitochondrial

2.2e-59

44.48

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Query:  DENSLKQ--LLDIPWFSNMSNHSISLRRREISRERKQKWIFK-NSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDICLEKAKTSKDLE
        D++SL++   L IP F+    + ISLR +E+SRERK++ ++K N  + RF ++ R+ AQKLGT+     F ++ +E  V EYNA+I + LE A+ S DL+
Subjt:  DENSLKQ--LLDIPWFSNMSNHSISLRRREISRERKQKWIFK-NSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDICLEKAKTSKDLE

Query:  VVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAHDGVDKYSLQEN
          L  I K ++L K M++ GF +E+  YGP+L YLI MDM++EF+ F + +++ +PGS  RLGYYEML ++ + D EKI+ELC      +G     LQEN
Subjt:  VVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAHDGVDKYSLQEN

Query:  YLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV
        YLLALC+ +QK  L ++LEIVDITK+ S+ L AN+F+ LGR  L S+A + L  L+ S  G +N+  LI  +    PN  V
Subjt:  YLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV

Arabidopsis top hits

e value

%identity

Alignment

AT4G04790.1 Tetratricopeptide repeat (TPR)-like superfamily protein

1.5e-60

44.48

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Query:  DENSLKQ--LLDIPWFSNMSNHSISLRRREISRERKQKWIFK-NSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDICLEKAKTSKDLE
        D++SL++   L IP F+    + ISLR +E+SRERK++ ++K N  + RF ++ R+ AQKLGT+     F ++ +E  V EYNA+I + LE A+ S DL+
Subjt:  DENSLKQ--LLDIPWFSNMSNHSISLRRREISRERKQKWIFK-NSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDICLEKAKTSKDLE

Query:  VVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAHDGVDKYSLQEN
          L  I K ++L K M++ GF +E+  YGP+L YLI MDM++EF+ F + +++ +PGS  RLGYYEML ++ + D EKI+ELC      +G     LQEN
Subjt:  VVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAHDGVDKYSLQEN

Query:  YLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV
        YLLALC+ +QK  L ++LEIVDITK+ S+ L AN+F+ LGR  L S+A + L  L+ S  G +N+  LI  +    PN  V
Subjt:  YLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAV

AT4G21880.1 Pentatricopeptide repeat (PPR) superfamily protein

3.3e-47

33.51

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Query:  KNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILCEGSSV
        K+LS++FR A+  +  +   +  A+       D    S SL   F    + S  S +    +  D   PA               L   +SS L   S  
Subjt:  KNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILCEGSSV

Query:  RSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDICLEKAK
         +   + NG++   K +L+     +    S S + ++ SR R     ++N Q+    +L + C +KLGT+   EV  K+G+E G KEYNA+  +C+++A+
Subjt:  RSPDAQENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDICLEKAK

Query:  TSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAHDGVDK
         S D E  L+QI K  +  K M++ GF + +  YGP   YL+DM+M+ EF    + +K+  P S  RL YYEML ++++ND EKI +LC + +   G+  
Subjt:  TSKDLEVVLEQIAKVYQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAHDGVDK

Query:  YSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALK-TSGNGAENIPYLIYNHVVSIPNLAV
          LQE YL+ALCE + KE   ++LEIVDIT +SS     ++F  LG+ LL S+A KLL  L+    +G E +  LI+++   IPN  V
Subjt:  YSLQENYLLALCECEQKEELLQMLEIVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALK-TSGNGAENIPYLIYNHVVSIPNLAV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCCGTCCAAATCCAAAAATCTAAGCTCTCTATTCCGCTCCGCCATTATAGCTTCAAAACCTTCACAGAATCCCCAAGATGCAGCTCTCAAAAACTACGTCTCCGCTAT
CGATCCCTTCTCTCCTAGCACCTCTCTCTCCAAAGCCTTCGATAAACGATCCATCAAGTCCGCGAACTCCAAGAAGCTTCCCCAGAAACTAAACTCTGACGTTCAATTTC
CTGCTCTCATTTTAGAAGAGCCGTCAGGGTCTGGGGATTCTATGAAGCATTTAACCAAGGCCATATCTTCCATTCTGTGCGAAGGCTCATCTGTTAGGTCTCCTGATGCA
CAAGAAAATGGTGATGAGAACTCTTTGAAACAATTATTAGACATACCATGGTTTTCCAACATGTCCAATCATAGCATATCATTGCGTCGCAGAGAAATATCTCGTGAAAG
AAAGCAAAAATGGATATTCAAAAATAGCCAAAACTATAGGTTTAATCAATTGGTTAGAAATTGTGCACAGAAGCTGGGGACTGATGTTACTTTAGAAGTCTTTGGTAAAT
TGGGACGAGAAACTGGTGTGAAAGAATACAATGCACTGATAGATATATGTTTAGAGAAGGCTAAGACAAGTAAAGACTTGGAGGTTGTATTGGAACAGATTGCAAAGGTT
TATCAGCTATTTAAATTAATGAAAGAACATGGTTTTCAGTTAGAAGATGAAACTTACGGTCCAGTTCTTACATATTTAATTGACATGGACATGATGGAAGAATTTAATTT
TTTCTGTGAGGCTGTAAAGGATGGAAATCCAGGCTCGAATTCAAGGTTGGGTTACTATGAGATGTTGTTCTATGTTAAAATCAATGATGTAGAAAAAATTCAGGAGCTCT
GTGAGCATGCTATAGCCCATGATGGAGTGGACAAGTACAGTTTACAAGAAAATTATTTGTTGGCCCTTTGTGAATGTGAGCAGAAGGAGGAACTTTTGCAGATGCTGGAA
ATTGTAGACATCACAAAACTTTCGTCAACTGTACTCGCAGCTAACGTCTTCAAGTGCTTAGGGAGATTATTACTTCACTCTATTGCAGAGAAGTTGCTTGTGGCGTTGAA
AACTTCTGGGAATGGAGCAGAGAATATCCCTTACCTTATATATAATCATGTTGTCAGCATTCCAAATTTAGCGGTGAGGTTCCCATGA

mRNA sequence

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CGTCGCCGATAAAACCATAAACCCCACAAAACAGCGGCGCAGCTCAGTTCGCCCGAGGCCGGGAAGTTGCAGAGCTTTCGGAATCTGAATCTCAAATGCCGTCCAAATCC
AAAAATCTAAGCTCTCTATTCCGCTCCGCCATTATAGCTTCAAAACCTTCACAGAATCCCCAAGATGCAGCTCTCAAAAACTACGTCTCCGCTATCGATCCCTTCTCTCC
TAGCACCTCTCTCTCCAAAGCCTTCGATAAACGATCCATCAAGTCCGCGAACTCCAAGAAGCTTCCCCAGAAACTAAACTCTGACGTTCAATTTCCTGCTCTCATTTTAG
AAGAGCCGTCAGGGTCTGGGGATTCTATGAAGCATTTAACCAAGGCCATATCTTCCATTCTGTGCGAAGGCTCATCTGTTAGGTCTCCTGATGCACAAGAAAATGGTGAT
GAGAACTCTTTGAAACAATTATTAGACATACCATGGTTTTCCAACATGTCCAATCATAGCATATCATTGCGTCGCAGAGAAATATCTCGTGAAAGAAAGCAAAAATGGAT
ATTCAAAAATAGCCAAAACTATAGGTTTAATCAATTGGTTAGAAATTGTGCACAGAAGCTGGGGACTGATGTTACTTTAGAAGTCTTTGGTAAATTGGGACGAGAAACTG
GTGTGAAAGAATACAATGCACTGATAGATATATGTTTAGAGAAGGCTAAGACAAGTAAAGACTTGGAGGTTGTATTGGAACAGATTGCAAAGGTTTATCAGCTATTTAAA
TTAATGAAAGAACATGGTTTTCAGTTAGAAGATGAAACTTACGGTCCAGTTCTTACATATTTAATTGACATGGACATGATGGAAGAATTTAATTTTTTCTGTGAGGCTGT
AAAGGATGGAAATCCAGGCTCGAATTCAAGGTTGGGTTACTATGAGATGTTGTTCTATGTTAAAATCAATGATGTAGAAAAAATTCAGGAGCTCTGTGAGCATGCTATAG
CCCATGATGGAGTGGACAAGTACAGTTTACAAGAAAATTATTTGTTGGCCCTTTGTGAATGTGAGCAGAAGGAGGAACTTTTGCAGATGCTGGAAATTGTAGACATCACA
AAACTTTCGTCAACTGTACTCGCAGCTAACGTCTTCAAGTGCTTAGGGAGATTATTACTTCACTCTATTGCAGAGAAGTTGCTTGTGGCGTTGAAAACTTCTGGGAATGG
AGCAGAGAATATCCCTTACCTTATATATAATCATGTTGTCAGCATTCCAAATTTAGCGGTGAGGTTCCCATGA

Protein sequence

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MPSKSKNLSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAFDKRSIKSANSKKLPQKLNSDVQFPALILEEPSGSGDSMKHLTKAISSILCEGSSVRSPDA
QENGDENSLKQLLDIPWFSNMSNHSISLRRREISRERKQKWIFKNSQNYRFNQLVRNCAQKLGTDVTLEVFGKLGRETGVKEYNALIDICLEKAKTSKDLEVVLEQIAKV
YQLFKLMKEHGFQLEDETYGPVLTYLIDMDMMEEFNFFCEAVKDGNPGSNSRLGYYEMLFYVKINDVEKIQELCEHAIAHDGVDKYSLQENYLLALCECEQKEELLQMLE
IVDITKLSSTVLAANVFKCLGRLLLHSIAEKLLVALKTSGNGAENIPYLIYNHVVSIPNLAVRFP

CmoCh01G012020 (gene) of Cucurbita moschata (Rifu) v1 genome