; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G012060 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G012060
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionphotosynthetic NDH subunit of lumenal location 3, chloroplastic
Genome locationCmo_Chr01:9758877..9759897
RNA-Seq ExpressionCmoCh01G012060
SyntenyCmoCh01G012060
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009344 - nitrite reductase complex [NAD(P)H] (cellular component)
GO:0009534 - chloroplast thylakoid (cellular component)
GO:0009654 - photosystem II oxygen evolving complex (cellular component)
GO:0019898 - extrinsic component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domainsIPR008797 - Oxygen-evolving enhancer protein 3
IPR023222 - PsbQ-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607822.1 Photosynthetic NDH subunit of lumenal location 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.1e-11097.25Show/hide
Query:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR
        MARLANLNGVSEKFSAIPKLSKLQKTRKRSKI GLLEKQ EVSSHE+SLTRRLALTSL SVALFGNA VEIASANEYWLDGPLPIPSVYNNIANEKTGTR
Subjt:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIA IGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE

Query:  AYYQQTTPILQEVMDRMA
        AYYQQTTPILQEVMDRMA
Subjt:  AYYQQTTPILQEVMDRMA

KAG7015220.1 Photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.2e-11197.71Show/hide
Query:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR
        MARLANLNGVSEKFSAIPKLSKLQKTRKRSKI GLLEKQ EVSSHE+SLTRRLALTSL SVALFGNA VEIASANEYWLDGPLPIPSVYNNIANEKTGTR
Subjt:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE

Query:  AYYQQTTPILQEVMDRMA
        AYYQQTTPILQEVMDRMA
Subjt:  AYYQQTTPILQEVMDRMA

XP_022940191.1 photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucurbita moschata]8.1e-114100Show/hide
Query:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR
        MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR
Subjt:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE

Query:  AYYQQTTPILQEVMDRMA
        AYYQQTTPILQEVMDRMA
Subjt:  AYYQQTTPILQEVMDRMA

XP_022981605.1 photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucurbita maxima]1.3e-11197.71Show/hide
Query:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR
        MARLANLNGVSEKFSAIPKLSKL+KTRKRSKIMGLLEKQAEVSSH +SLTRRLALTSL SVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR
Subjt:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLT+LANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE

Query:  AYYQQTTPILQEVMDRMA
        AYYQQTTPILQEVMDRMA
Subjt:  AYYQQTTPILQEVMDRMA

XP_023525405.1 photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucurbita pepo subsp. pepo]3.2e-11096.79Show/hide
Query:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR
        MARLANLNGVSEKFSAIPKLSKLQKTRKRSKI G LEKQAEVSSHE+SLTRRLALTSL SVALFGNA VEIASANEYWLDGPLPIPSVYNNIANEKTGTR
Subjt:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
        SFLK GIYIANIGTEGRKYRLKRYAFDL+AMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE

Query:  AYYQQTTPILQEVMDRMA
        AYYQQTTPILQEVMDRMA
Subjt:  AYYQQTTPILQEVMDRMA

TrEMBL top hitse value%identityAlignment
A0A0A0L7N1 Uncharacterized protein5.7e-9786.7Show/hide
Query:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR
        MARLANLNG   KFSAIP L KLQ   KR KI G L+KQ +VSSH++SLTRRLALTSL SVALFGNAS EIASANEYWLDGPLP+PSV NNI NE+TGTR
Subjt:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGT+GRKYRLK+YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAA D EKQPL DLANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE

Query:  AYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  AYYQQTTPILQEVMDRMA

A0A5A7TX10 Photosynthetic NDH subunit of lumenal location 31.7e-9686.24Show/hide
Query:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR
        MARLANLNG   KFSAIP L KLQ   K+ KI G L+KQ +VSSH++SLTRRLALTSL SVALFGNAS EIASANEYWLDGPLP+PSV NNIANE+TGTR
Subjt:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGT+GRKYRLK+YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAA D EKQPL DLANRLFDNFEKLE+AAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE

Query:  AYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  AYYQQTTPILQEVMDRMA

A0A6J1CCI9 photosynthetic NDH subunit of lumenal location 3, chloroplastic7.4e-10591.74Show/hide
Query:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR
        MARLANLNGVS+KFSAIPKL KLQ  RKR KI+G L KQ EVSSH  S TRRLALTS+ SVALFGNASVEIASANEYWLDGPLP+PSVYNNIANEKTGTR
Subjt:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAA DGEKQPLT+LANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE

Query:  AYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  AYYQQTTPILQEVMDRMA

A0A6J1FHS2 photosynthetic NDH subunit of lumenal location 3, chloroplastic3.9e-114100Show/hide
Query:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR
        MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR
Subjt:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE

Query:  AYYQQTTPILQEVMDRMA
        AYYQQTTPILQEVMDRMA
Subjt:  AYYQQTTPILQEVMDRMA

A0A6J1IZZ5 photosynthetic NDH subunit of lumenal location 3, chloroplastic6.3e-11297.71Show/hide
Query:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR
        MARLANLNGVSEKFSAIPKLSKL+KTRKRSKIMGLLEKQAEVSSH +SLTRRLALTSL SVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR
Subjt:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTR

Query:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE
        SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLT+LANRLFDNFEKLEDAAKQKNLSETE
Subjt:  SFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETE

Query:  AYYQQTTPILQEVMDRMA
        AYYQQTTPILQEVMDRMA
Subjt:  AYYQQTTPILQEVMDRMA

SwissProt top hitse value%identityAlignment
P12301 Oxygen-evolving enhancer protein 3, chloroplastic1.6e-1127.07Show/hide
Query:  MARLANLNGVSE-------KFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVE--IASANEYWLDGPLPIPSVYNN
        MA +A L G S+       + S   +LS    +R     MGL  +  +VS+   + T R A+    +  L   + V+  +A A    +  P P+      
Subjt:  MARLANLNGVSE-------KFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVE--IASANEYWLDGPLPIPSVYNN

Query:  IANE---KTGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLE
          N    + GT  + K   Y+  +       R K  A ++L +   I +     ++  LRL+++++ YD   VISA    EK+ L +L ++LF + + L+
Subjt:  IANE---KTGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLE

Query:  DAAKQKNLSETEAYYQQTTPILQEVMDRM
         AAK K+ +E E YY QT   + EV+ ++
Subjt:  DAAKQKNLSETEAYYQQTTPILQEVMDRM

Q41932 Oxygen-evolving enhancer protein 3-2, chloroplastic1.6e-1130.32Show/hide
Query:  LLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVE--IASANEYWLDGPLPIPSVYNNIANEKTGTRSF---LKTGIYIANIGTEGRKYRLKRYAFDLL
        ++  Q  VS  E S   R ++  L +  L G + V+   A A    + GP P+PS      +     R F   LK   YI  +       R K  A +++
Subjt:  LLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVE--IASANEYWLDGPLPIPSVYNNIANEKTGTRSF---LKTGIYIANIGTEGRKYRLKRYAFDLL

Query:  AMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETEAYYQQTTPILQEVMDRM
         +   I K    YV+  LRL+++++ YD + VISA    EKQ L DL  +LF   + L+ AA+ K+  + E YY +T   L  V+ ++
Subjt:  AMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETEAYYQQTTPILQEVMDRM

Q9SGH4 Photosynthetic NDH subunit of lumenal location 3, chloroplastic9.5e-6558.3Show/hide
Query:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAE--VSSHEVSLTRRLALTSLTSVAL---FGNASVEIASANEYWLDGPLPIPSVYNNIANE
        MA   +LN ++   + +P L KL ++RK  K  G   ++ E       V +TRR+ L    S+ L    G  +V +A  N +W+DGPLPIP +YNNI NE
Subjt:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAE--VSSHEVSLTRRLALTSLTSVAL---FGNASVEIASANEYWLDGPLPIPSVYNNIANE

Query:  KTGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKN
        KTGTR+F+K G+Y+A+IGT+GR YR+K+ AFDLLAM DLIG DTLNYV+KYLRLKSTF++YDFDN+ISAA   +KQPLTDLANRLFDNFEKLEDAAK KN
Subjt:  KTGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKN

Query:  LSETEAYYQQTTPILQEVMDRMA
        L+ETE+ Y+ T  +LQEVM RMA
Subjt:  LSETEAYYQQTTPILQEVMDRMA

Q9XFT3 Oxygen-evolving enhancer protein 3-1, chloroplastic3.8e-1326.91Show/hide
Query:  MARLANLNGVSEK-FSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLD-GPLPIPSVYNNIANEKTG
        MA +  L+G S        K++   +     ++      +  V + +   T R ++  L +  L G + V+   A+   +  GP P PS       + + 
Subjt:  MARLANLNGVSEK-FSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLD-GPLPIPSVYNNIANEKTG

Query:  -TRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQK
          R F   LK   Y+  +       R K  A D++ +  LI +    YV+  LR K++++ YD + +IS+    EK+ L DL  +LFD  + L+ AAK+K
Subjt:  -TRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQK

Query:  NLSETEAYYQQTTPILQEVMDRM
        + S+ E YY +T   L EV+ ++
Subjt:  NLSETEAYYQQTTPILQEVMDRM

Q9XI73 Photosynthetic NDH subunit of lumenal location 2, chloroplastic3.0e-1026.63Show/hide
Query:  TRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRL
        TRR  LTSL +  + G A+   +SA                 +A EK GTRSF+K   ++  +  E    R+K+ A  L  M +++   +  YV  Y+RL
Subjt:  TRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRL

Query:  KSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETEAYYQQTTPILQEVMDRMA
        K  ++  D  N ++   +  +      AN L +N  +L+   +   + E+  YY++T   +  V++ +A
Subjt:  KSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETEAYYQQTTPILQEVMDRMA

Arabidopsis top hitse value%identityAlignment
AT1G14150.1 PsbQ-like 22.1e-1126.63Show/hide
Query:  TRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRL
        TRR  LTSL +  + G A+   +SA                 +A EK GTRSF+K   ++  +  E    R+K+ A  L  M +++   +  YV  Y+RL
Subjt:  TRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRL

Query:  KSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETEAYYQQTTPILQEVMDRMA
        K  ++  D  N ++   +  +      AN L +N  +L+   +   + E+  YY++T   +  V++ +A
Subjt:  KSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETEAYYQQTTPILQEVMDRMA

AT3G01440.1 PsbQ-like 16.7e-6658.3Show/hide
Query:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAE--VSSHEVSLTRRLALTSLTSVAL---FGNASVEIASANEYWLDGPLPIPSVYNNIANE
        MA   +LN ++   + +P L KL ++RK  K  G   ++ E       V +TRR+ L    S+ L    G  +V +A  N +W+DGPLPIP +YNNI NE
Subjt:  MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAE--VSSHEVSLTRRLALTSLTSVAL---FGNASVEIASANEYWLDGPLPIPSVYNNIANE

Query:  KTGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKN
        KTGTR+F+K G+Y+A+IGT+GR YR+K+ AFDLLAM DLIG DTLNYV+KYLRLKSTF++YDFDN+ISAA   +KQPLTDLANRLFDNFEKLEDAAK KN
Subjt:  KTGTRSFLKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKN

Query:  LSETEAYYQQTTPILQEVMDRMA
        L+ETE+ Y+ T  +LQEVM RMA
Subjt:  LSETEAYYQQTTPILQEVMDRMA

AT4G05180.1 photosystem II subunit Q-21.1e-1230.32Show/hide
Query:  LLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVE--IASANEYWLDGPLPIPSVYNNIANEKTGTRSF---LKTGIYIANIGTEGRKYRLKRYAFDLL
        ++  Q  VS  E S   R ++  L +  L G + V+   A A    + GP P+PS      +     R F   LK   YI  +       R K  A +++
Subjt:  LLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVE--IASANEYWLDGPLPIPSVYNNIANEKTGTRSF---LKTGIYIANIGTEGRKYRLKRYAFDLL

Query:  AMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETEAYYQQTTPILQEVMDRM
         +   I K    YV+  LRL+++++ YD + VISA    EKQ L DL  +LF   + L+ AA+ K+  + E YY +T   L  V+ ++
Subjt:  AMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETEAYYQQTTPILQEVMDRM

AT4G21280.1 photosystem II subunit QA7.1e-1527.03Show/hide
Query:  MARLANLNGVSEK-FSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLD-GPLPIPSVYNNIANEKTG
        MA +  L+G S        K++   +     ++      +  V + +   T R ++  L +  L G + V+   A+   +  GP P PS      +    
Subjt:  MARLANLNGVSEK-FSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLD-GPLPIPSVYNNIANEKTG

Query:  TRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKN
         R F   LK   Y+  +       R K  A D++ +  LI +    YV+  LR K++++ YD + +IS+    EK+ L DL  +LFD  + L+ AAK+K+
Subjt:  TRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKN

Query:  LSETEAYYQQTTPILQEVMDRM
         S+ E YY +T   L EV+ ++
Subjt:  LSETEAYYQQTTPILQEVMDRM

AT4G21280.2 photosystem II subunit QA2.7e-1426.91Show/hide
Query:  MARLANLNGVSEK-FSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLD-GPLPIPSVYNNIANEKTG
        MA +  L+G S        K++   +     ++      +  V + +   T R ++  L +  L G + V+   A+   +  GP P PS       + + 
Subjt:  MARLANLNGVSEK-FSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLD-GPLPIPSVYNNIANEKTG

Query:  -TRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQK
          R F   LK   Y+  +       R K  A D++ +  LI +    YV+  LR K++++ YD + +IS+    EK+ L DL  +LFD  + L+ AAK+K
Subjt:  -TRSF---LKTGIYIANIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQK

Query:  NLSETEAYYQQTTPILQEVMDRM
        + S+ E YY +T   L EV+ ++
Subjt:  NLSETEAYYQQTTPILQEVMDRM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGTCTTGCGAACTTAAACGGTGTCTCGGAGAAGTTCTCCGCCATTCCCAAGCTTTCGAAGCTTCAAAAGACTCGTAAGAGATCGAAAATAATGGGGCTTCTCGA
GAAACAAGCGGAGGTTTCCTCTCATGAAGTCTCATTGACAAGAAGATTAGCTCTTACCAGTCTCACATCTGTCGCTCTCTTTGGCAATGCATCGGTCGAGATCGCTTCTG
CTAACGAGTACTGGCTCGATGGCCCTCTGCCAATCCCTTCTGTTTATAACAACATAGCGAACGAGAAAACAGGTACTCGATCGTTTTTGAAGACGGGGATTTACATAGCT
AACATAGGGACGGAAGGGAGAAAATACAGATTGAAGAGATATGCGTTTGATCTTCTGGCTATGGCGGATTTGATTGGGAAAGATACTTTGAACTATGTGAGGAAATATCT
TCGACTCAAATCGACGTTCATGTACTACGATTTCGACAATGTTATTTCGGCAGCAGAAGACGGTGAGAAGCAGCCTCTCACCGACTTAGCAAACCGATTATTCGACAACT
TCGAGAAGCTTGAAGATGCAGCAAAGCAGAAGAATCTGAGTGAAACTGAAGCTTACTATCAACAGACAACGCCTATACTTCAAGAAGTTATGGATAGAATGGCATAA
mRNA sequenceShow/hide mRNA sequence
AAGCTCTGCCTCTTTCTATTGCCAATTCCTCCGTTTCTCTTCAAAGCTTTGCATCAATGGCTCGTCTTGCGAACTTAAACGGTGTCTCGGAGAAGTTCTCCGCCATTCCC
AAGCTTTCGAAGCTTCAAAAGACTCGTAAGAGATCGAAAATAATGGGGCTTCTCGAGAAACAAGCGGAGGTTTCCTCTCATGAAGTCTCATTGACAAGAAGATTAGCTCT
TACCAGTCTCACATCTGTCGCTCTCTTTGGCAATGCATCGGTCGAGATCGCTTCTGCTAACGAGTACTGGCTCGATGGCCCTCTGCCAATCCCTTCTGTTTATAACAACA
TAGCGAACGAGAAAACAGGTACTCGATCGTTTTTGAAGACGGGGATTTACATAGCTAACATAGGGACGGAAGGGAGAAAATACAGATTGAAGAGATATGCGTTTGATCTT
CTGGCTATGGCGGATTTGATTGGGAAAGATACTTTGAACTATGTGAGGAAATATCTTCGACTCAAATCGACGTTCATGTACTACGATTTCGACAATGTTATTTCGGCAGC
AGAAGACGGTGAGAAGCAGCCTCTCACCGACTTAGCAAACCGATTATTCGACAACTTCGAGAAGCTTGAAGATGCAGCAAAGCAGAAGAATCTGAGTGAAACTGAAGCTT
ACTATCAACAGACAACGCCTATACTTCAAGAAGTTATGGATAGAATGGCATAAACTGTGGAAGTTTTTGAGAAGATTAAGGATCAGTTTCCTTTTTTTTCCACTGTTCTT
CTGTTGTTCTTGTTTATAATTCGATTCGATTTTGCATCCATATATAAATGTGGCGTAACGATGCAATAATAGTGGTTCGAGTGTTTAATCTTAGTTCAAC
Protein sequenceShow/hide protein sequence
MARLANLNGVSEKFSAIPKLSKLQKTRKRSKIMGLLEKQAEVSSHEVSLTRRLALTSLTSVALFGNASVEIASANEYWLDGPLPIPSVYNNIANEKTGTRSFLKTGIYIA
NIGTEGRKYRLKRYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAEDGEKQPLTDLANRLFDNFEKLEDAAKQKNLSETEAYYQQTTPILQEVMDRMA