; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G012720 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G012720
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPRA1 family protein
Genome locationCmo_Chr01:10180746..10182628
RNA-Seq ExpressionCmoCh01G012720
SyntenyCmoCh01G012720
Gene Ontology termsGO:0016192 - vesicle-mediated transport (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004895 - Prenylated rab acceptor PRA1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607888.1 PRA1 family protein H, partial [Cucurbita argyrosperma subsp. sororia]1.6e-10098.96Show/hide
Query:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW
        MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVT LSIFTLNPFAKLSAADFSGPTPSW
Subjt:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW

Query:  TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQC
        TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKF CNRWGLDKYPVVWQCLVRVAQC
Subjt:  TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQC
XP_022941382.1 PRA1 family protein H-like isoform X1 [Cucurbita moschata]2.2e-102100Show/hide
Query:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW
        MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW
Subjt:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW

Query:  TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQC
        TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQC
Subjt:  TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQC
XP_022941383.1 PRA1 family protein H-like isoform X2 [Cucurbita moschata]4.4e-103100Show/hide
Query:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW
        MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW
Subjt:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW

Query:  TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQCG
        TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQCG
Subjt:  TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQCG
XP_022981939.1 PRA1 family protein H-like isoform X1 [Cucurbita maxima]1.2e-10098.44Show/hide
Query:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW
        MSFSPNPLSLSVPD AFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTL SIFTLNPFAKLSAADFSGP PSW
Subjt:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW

Query:  TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQC
        TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQC
Subjt:  TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQC
XP_022981940.1 PRA1 family protein H-like isoform X2 [Cucurbita maxima]2.4e-10198.45Show/hide
Query:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW
        MSFSPNPLSLSVPD AFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTL SIFTLNPFAKLSAADFSGP PSW
Subjt:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW

Query:  TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQCG
        TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQCG
Subjt:  TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQCG
TrEMBL top hitse value%identityAlignment
A0A0A0L4P4 PRA1 family protein9.6e-8885.42Show/hide
Query:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW
        MSFS NPLSLSVPD AFDSWLRDSGYLEI+DQRTSD+HRHSS    AA P   T     PLATGFFISLFSRI TLLSIFTLNPFAKLSAADFSGPTPSW
Subjt:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW

Query:  TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQC
        T+GF+G FESYSFPSSPAQARLR HENAKRYARNYASLFVLFFVCTLYQMP+ALLGLISC+ALWD+VKFCC+RWGLDKYPV+WQCLVR+AQC
Subjt:  TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQC
A0A6J1FMA4 PRA1 family protein1.1e-102100Show/hide
Query:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW
        MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW
Subjt:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW

Query:  TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQC
        TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQC
Subjt:  TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQC
A0A6J1FRZ0 PRA1 family protein2.1e-103100Show/hide
Query:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW
        MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW
Subjt:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW

Query:  TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQCG
        TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQCG
Subjt:  TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQCG
A0A6J1J170 PRA1 family protein1.2e-10198.45Show/hide
Query:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW
        MSFSPNPLSLSVPD AFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTL SIFTLNPFAKLSAADFSGP PSW
Subjt:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW

Query:  TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQCG
        TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQCG
Subjt:  TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQCG
A0A6J1J379 PRA1 family protein5.8e-10198.44Show/hide
Query:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW
        MSFSPNPLSLSVPD AFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTL SIFTLNPFAKLSAADFSGP PSW
Subjt:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSW

Query:  TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQC
        TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQC
Subjt:  TSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQC
SwissProt top hitse value%identityAlignment
Q8LFP1 PRA1 family protein H2.9e-5755.1Show/hide
Query:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPT----TPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGP
        M+FSPNPLSLSVPD AF+SWLRDSGYLE++D RTS     +S++A+ ++   +TSA +    + +  GFF SL SR+VT+ S+ T+NPF+KLSA DFSG 
Subjt:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPT----TPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGP

Query:  TPSWTSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQC
        T  WT+GFIG+ +SYSFPSS  QAR+R HEN KR+ARNYA+LF++FF C LYQMP+AL+GL+  +ALW++ K+C ++W  D++P + +  + + QC
Subjt:  TPSWTSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQC
Arabidopsis top hitse value%identityAlignment
AT4G27540.1 prenylated RAB acceptor 1.H2.1e-5855.1Show/hide
Query:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPT----TPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGP
        M+FSPNPLSLSVPD AF+SWLRDSGYLE++D RTS     +S++A+ ++   +TSA +    + +  GFF SL SR+VT+ S+ T+NPF+KLSA DFSG 
Subjt:  MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPT----TPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGP

Query:  TPSWTSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQC
        T  WT+GFIG+ +SYSFPSS  QAR+R HEN KR+ARNYA+LF++FF C LYQMP+AL+GL+  +ALW++ K+C ++W  D++P + +  + + QC
Subjt:  TPSWTSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTCTCACCCAATCCACTTTCCCTCAGCGTCCCTGACGGTGCTTTCGATTCATGGCTCCGCGATTCCGGCTACCTTGAAATTATCGATCAGCGCACCTCT
GACGTCCACCGTCATTCCTCCGCCGCTGCCGCCGCTGCTGCCCCCATCACATCTACCTCCGCCCCCACCACCCCTTTAGCTACTGGTTTCTTCATCTCCCTTTTC
TCTCGAATCGTGACCCTTCTCTCCATTTTCACCCTTAACCCCTTTGCCAAGCTCTCTGCTGCGGATTTTTCTGGGCCAACCCCCTCCTGGACTTCTGGGTTTATT
GGGTCTTTTGAGTCGTACTCGTTTCCTTCTTCGCCGGCTCAAGCTCGTCTAAGAGCCCATGAGAATGCTAAACGCTATGCTCGCAATTACGCGTCCCTGTTTGTT
CTCTTCTTTGTCTGCACGCTGTACCAGATGCCTGTTGCCCTTCTTGGGTTGATATCATGTATGGCACTTTGGGACGTTGTTAAGTTTTGTTGCAACAGGTGGGGA
TTAGACAAATATCCAGTTGTTTGGCAGTGTTTGGTTCGCGTTGCTCAGTGTGGTGAGTTTTAA
mRNA sequenceShow/hide mRNA sequence
TTGTAGTCAAAAGAAGAACCCAATAACCCGGATGCCGGGCCCGCCGGGAATCTGAACCGTGGCGTTGATTATTTGATTGGCGAGACGGAGGAGAAATCATGAGAC
ACCTCCATCAATCTGCAACACAACAGAATAAAACAAGAATCTGGAACCAACAATCTTCAATCACAAGGCCATTTCAATTCCCCTTTATATATAACCCACTTTGTC
AAATTGTCTCTTCTGATTCTGAATCCCTTGATTTTGTTGCTTCGATTACGAATGAGTTTCTCACCCAATCCACTTTCCCTCAGCGTCCCTGACGGTGCTTTCGAT
TCATGGCTCCGCGATTCCGGCTACCTTGAAATTATCGATCAGCGCACCTCTGACGTCCACCGTCATTCCTCCGCCGCTGCCGCCGCTGCTGCCCCCATCACATCT
ACCTCCGCCCCCACCACCCCTTTAGCTACTGGTTTCTTCATCTCCCTTTTCTCTCGAATCGTGACCCTTCTCTCCATTTTCACCCTTAACCCCTTTGCCAAGCTC
TCTGCTGCGGATTTTTCTGGGCCAACCCCCTCCTGGACTTCTGGGTTTATTGGGTCTTTTGAGTCGTACTCGTTTCCTTCTTCGCCGGCTCAAGCTCGTCTAAGA
GCCCATGAGAATGCTAAACGCTATGCTCGCAATTACGCGTCCCTGTTTGTTCTCTTCTTTGTCTGCACGCTGTACCAGATGCCTGTTGCCCTTCTTGGGTTGATA
TCATGTATGGCACTTTGGGACGTTGTTAAGTTTTGTTGCAACAGGTGGGGATTAGACAAATATCCAGTTGTTTGGCAGTGTTTGGTTCGCGTTGCTCAGTGTGGT
GAGTTTTAACGTTTTTAAGTAGGACTTTGCATATACACATCTGAGAAGTTCCTCCCAAGTCTTCTCTTCAAACATGTATAATGCCTATGGCTATCTATCGTAGTT
CTTGTTTTGACTGTTTCATTTGGTTAAGATTACAAGCCTAAGGCTATCTATCGTTTTAAGATGACTGATAATATTAGCTCAATTGTCCCGTATTCTGAGAAATTG
AGCTAATGTGTTGGCGGGGTAGGCAGCATGTGAGACCCTACATTGATTGAGGAGGAGAACGAAGCATTTTTTATAAGAGTGTGGAAACCTTTTCCTAGCAACGCG
TTTTAAAAACCTTGAGGGGAAGTTCGAAAGGGAAAGCCCAAAGAGGATAATATCCGCTAGCGGTGGGCTTGGACTCTTATAGATGGTATAAGAGCTAGTTACCGA
GTGGTGTGTCGGCAAGGACGTTATGCCCCAAAGGGGGTGGACACCGAGCGGTGTGCCAACGAGGACGTTGGGCTCCGAAGGGGGTGGAATGTGAGATCCCTTATC
GATTGGAGAGGCCAGCAAGGATGCTGGCCCCGAAGAGGAGTGGATTGTGAGATCGCATATCGATT
Protein sequenceShow/hide protein sequence
MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAAAAPITSTSAPTTPLATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSWTSGFI
GSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVWQCLVRVAQCGEF