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CmoCh01G012740 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G012740
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein yippee-like
Genome locationCmo_Chr01:10185958..10189027
RNA-Seq ExpressionCmoCh01G012740
SyntenyCmoCh01G012740
Gene Ontology termsGO:0000151 - ubiquitin ligase complex (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004910 - Yippee/Mis18/Cereblon
IPR034751 - Yippee domain
IPR039058 - Yippee family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016903088.1 PREDICTED: protein yippee-like At5g53940 [Cucumis melo]1.5e-5381.4Show/hide
Query:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
        MGRVFVVE+EGRSYRCK+CNTQLAL DDLASR FHCRRGKAYLFN+ INIS GALEERMMLSGLHTVADIFCCTCGQIVGWKY+AAHEKSQKYKEGK+VL
Subjt:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL

Query:  ERGRIVDDT-------LNFRLSISDSDDN
        ERGRIVDD        ++ R S+SDS++N
Subjt:  ERGRIVDDT-------LNFRLSISDSDDN

XP_022139779.1 protein yippee-like At5g53940 [Momordica charantia]9.0e-5480.62Show/hide
Query:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
        MGR+FVVE+EGRSYRC+FCNTQLALADDLASR FHCRRGKAYLFN+ INIS GALEERMMLSGLHTVADIFCC+CGQIVGWKY+AAHEKSQKYKEGKFVL
Subjt:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL

Query:  ERGRIVDDT-------LNFRLSISDSDDN
        ERGRI+DD        ++ R  +SDS+DN
Subjt:  ERGRIVDDT-------LNFRLSISDSDDN

XP_022941387.1 protein yippee-like At5g53940 [Cucurbita moschata]1.5e-64100Show/hide
Query:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
        MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
Subjt:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL

Query:  ERGRIVDDTLNFRLSISDSDDN
        ERGRIVDDTLNFRLSISDSDDN
Subjt:  ERGRIVDDTLNFRLSISDSDDN

XP_023525530.1 protein yippee-like At5g53940 isoform X2 [Cucurbita pepo subsp. pepo]3.3e-6499.18Show/hide
Query:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
        MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHV+NISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
Subjt:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL

Query:  ERGRIVDDTLNFRLSISDSDDN
        ERGRIVDDTLNFRLSISDSDDN
Subjt:  ERGRIVDDTLNFRLSISDSDDN

XP_038899427.1 protein yippee-like At5g53940 [Benincasa hispida]4.0e-5482.95Show/hide
Query:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
        MGRVFVVE+EGRSYRCK+CNTQLAL DDLASR FHCRRGKAYLFN+ INIS GALEERMMLSGLHTVADIFCCTCGQIVGWKY+AAHEKSQKYKEGK+VL
Subjt:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL

Query:  ERGRIVDDT-------LNFRLSISDSDDN
        ERGRIVDD        ++ R SISDS+DN
Subjt:  ERGRIVDDT-------LNFRLSISDSDDN

TrEMBL top hitse value%identityAlignment
A0A1S4E4C9 Protein yippee-like7.4e-5481.4Show/hide
Query:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
        MGRVFVVE+EGRSYRCK+CNTQLAL DDLASR FHCRRGKAYLFN+ INIS GALEERMMLSGLHTVADIFCCTCGQIVGWKY+AAHEKSQKYKEGK+VL
Subjt:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL

Query:  ERGRIVDDT-------LNFRLSISDSDDN
        ERGRIVDD        ++ R S+SDS++N
Subjt:  ERGRIVDDT-------LNFRLSISDSDDN

A0A6J1CDY9 Protein yippee-like4.4e-5480.62Show/hide
Query:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
        MGR+FVVE+EGRSYRC+FCNTQLALADDLASR FHCRRGKAYLFN+ INIS GALEERMMLSGLHTVADIFCC+CGQIVGWKY+AAHEKSQKYKEGKFVL
Subjt:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL

Query:  ERGRIVDDT-------LNFRLSISDSDDN
        ERGRI+DD        ++ R  +SDS+DN
Subjt:  ERGRIVDDT-------LNFRLSISDSDDN

A0A6J1FMA9 Protein yippee-like7.2e-65100Show/hide
Query:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
        MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
Subjt:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL

Query:  ERGRIVDDTLNFRLSISDSDDN
        ERGRIVDDTLNFRLSISDSDDN
Subjt:  ERGRIVDDTLNFRLSISDSDDN

A0A6J1J389 Protein yippee-like7.2e-65100Show/hide
Query:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
        MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
Subjt:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL

Query:  ERGRIVDDTLNFRLSISDSDDN
        ERGRIVDDTLNFRLSISDSDDN
Subjt:  ERGRIVDDTLNFRLSISDSDDN

A0A6J1J3H4 Protein yippee-like1.7e-53100Show/hide
Query:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
        MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
Subjt:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL

Query:  ER
        ER
Subjt:  ER

SwissProt top hitse value%identityAlignment
P59234 Protein yippee-like7.2e-3863.81Show/hide
Query:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
        MGR+FV+  EG+ Y CK C T LAL++++ S++FHC+ GKAYLF+ V+N++SG +E RMM++G+HTVADIFC  CG IVGWKY+ AHEKSQKYKEGK VL
Subjt:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL

Query:  ERGRI
        ER +I
Subjt:  ERGRI

Q9C777 Protein yippee-like At3g112301.1e-3359.05Show/hide
Query:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
        MGR+F+V  EG+SY CK C T LAL DD+ S++F  R GKAYLF+ V+N+ +G  E+RMM++G+HTV DI+C  CG  VGWKY+ A EK+QKYKEGK VL
Subjt:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL

Query:  ERGRI
        ER ++
Subjt:  ERGRI

Q9FN32 Protein yippee-like At5g539402.6e-4869.77Show/hide
Query:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
        MGR+F VE EGRSYRC+FC T LAL DDL SR+FHCRRGKAYLFN  +NIS G LEER+MLSG+HTVADIFCC CGQ VGWKY++AHEK+QKYKEGKFVL
Subjt:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL

Query:  ERGRIVDDT-------LNFRLSISDSDDN
        ERGRIVD+        ++   S SD++D+
Subjt:  ERGRIVDDT-------LNFRLSISDSDDN

Q9LY56 Protein yippee-like At3g558901.8e-3356.2Show/hide
Query:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
        MGRVF+V+ EG  Y CK C T L+   D+ S++F C+ G+AYLFN+V+N+S G  E+RMM++GLH V DIFC  CG  VGWKY+ AHEKSQKYKEGK VL
Subjt:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL

Query:  ERGRIVDDTLNFRLSISDSDD
        E  +I     +  L +SD DD
Subjt:  ERGRIVDDTLNFRLSISDSDD

Q9SR97 Protein yippee-like At3g089902.0e-3555.66Show/hide
Query:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
        MGR+FV++ EG  Y CK+C T  A+ +D+ S++FHC+ G+AYLF++V+N++ G  E R+M++G HTVADIFC +CG +VGWKY+ A++KSQKYKEGKF+L
Subjt:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL

Query:  ERGRIV
        ER +++
Subjt:  ERGRIV

Arabidopsis top hitse value%identityAlignment
AT2G40110.1 Yippee family putative zinc-binding protein5.7e-3858.14Show/hide
Query:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
        MGR+FVV  EG+ Y CK C T LA  +D+ S++FHC+ GKAYLFN V N+S G  EER+M++G HTVADIFC +CG IVGWKY+ AHEK+QKYKEGK VL
Subjt:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL

Query:  ERGRIV-DDTLNFRLSI-------SDSDD
        ER +I   D  N+ +S        SD+DD
Subjt:  ERGRIV-DDTLNFRLSI-------SDSDD

AT2G40110.2 Yippee family putative zinc-binding protein9.7e-3865.69Show/hide
Query:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
        MGR+FVV  EG+ Y CK C T LA  +D+ S++FHC+ GKAYLFN V N+S G  EER+M++G HTVADIFC +CG IVGWKY+ AHEK+QKYKEGK VL
Subjt:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL

Query:  ER
        ER
Subjt:  ER

AT3G08990.1 Yippee family putative zinc-binding protein1.4e-3655.66Show/hide
Query:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
        MGR+FV++ EG  Y CK+C T  A+ +D+ S++FHC+ G+AYLF++V+N++ G  E R+M++G HTVADIFC +CG +VGWKY+ A++KSQKYKEGKF+L
Subjt:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL

Query:  ERGRIV
        ER +++
Subjt:  ERGRIV

AT3G08990.2 Yippee family putative zinc-binding protein1.4e-3655.66Show/hide
Query:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
        MGR+FV++ EG  Y CK+C T  A+ +D+ S++FHC+ G+AYLF++V+N++ G  E R+M++G HTVADIFC +CG +VGWKY+ A++KSQKYKEGKF+L
Subjt:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL

Query:  ERGRIV
        ER +++
Subjt:  ERGRIV

AT5G53940.1 Yippee family putative zinc-binding protein1.9e-4969.77Show/hide
Query:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL
        MGR+F VE EGRSYRC+FC T LAL DDL SR+FHCRRGKAYLFN  +NIS G LEER+MLSG+HTVADIFCC CGQ VGWKY++AHEK+QKYKEGKFVL
Subjt:  MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVL

Query:  ERGRIVDDT-------LNFRLSISDSDDN
        ERGRIVD+        ++   S SD++D+
Subjt:  ERGRIVDDT-------LNFRLSISDSDDN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGGGTTTTTGTTGTGGAAAAGGAAGGGCGATCGTACAGATGCAAGTTCTGCAATACACAGTTAGCTCTCGCCGATGACCTTGCATCTCGGACCTTTCATTGCCG
CCGGGGAAAAGCTTACCTCTTCAATCATGTAATAAACATTTCTTCGGGAGCATTGGAAGAGAGGATGATGCTCTCAGGACTACATACAGTAGCTGACATATTTTGTTGCA
CATGTGGCCAAATTGTCGGGTGGAAATATGACGCAGCACATGAGAAGAGCCAGAAATACAAGGAGGGCAAGTTTGTTCTTGAAAGGGGGAGGATCGTGGATGACACATTG
AATTTTCGACTTAGTATCAGTGATAGCGATGATAATTAG
mRNA sequenceShow/hide mRNA sequence
GGACGAATTTAAGAGAAAAAGGCGGTTTCCTTTTTCTCCGTATTACATTCTCTCAATCCAAGCTTACTTTTACTGTTTACTAAGGAGCAGTAGTTGCTTCAGACGGCGGC
GCTATCCTTTCCGTGTAGAAGCTGAGTCGGAAAACGAGCGATGGGAAGGGTTTTTGTTGTGGAAAAGGAAGGGCGATCGTACAGATGCAAGTTCTGCAATACACAGTTAG
CTCTCGCCGATGACCTTGCATCTCGGACCTTTCATTGCCGCCGGGGAAAAGCTTACCTCTTCAATCATGTAATAAACATTTCTTCGGGAGCATTGGAAGAGAGGATGATG
CTCTCAGGACTACATACAGTAGCTGACATATTTTGTTGCACATGTGGCCAAATTGTCGGGTGGAAATATGACGCAGCACATGAGAAGAGCCAGAAATACAAGGAGGGCAA
GTTTGTTCTTGAAAGGGGGAGGATCGTGGATGACACATTGAATTTTCGACTTAGTATCAGTGATAGCGATGATAATTAGGGACAACCGTCCGCCATCCACCTCCGGTGAC
CACCACCACCACCATCTATCACCAACCTCCAACAACCACCGTCTACCACCTGACCTATATCCACCTCTTACAACCACCATCTACTTAGGGTGACCACTATTATCACCCAT
CGTCTTATATCCACTCATGAGATCCTACGTTAGTTGAAGAGGAGATCGAACAATTTCTTATGGAAGGTGTAGAAACTTTTTCTAGTAGATGTGATTTAAAATTGTGAGGC
TGATGACAATACAAGATGAGTTATGGAG
Protein sequenceShow/hide protein sequence
MGRVFVVEKEGRSYRCKFCNTQLALADDLASRTFHCRRGKAYLFNHVINISSGALEERMMLSGLHTVADIFCCTCGQIVGWKYDAAHEKSQKYKEGKFVLERGRIVDDTL
NFRLSISDSDDN