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CmoCh01G012930 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G012930
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCLAVATA3/ESR-RELATED 3
Genome locationCmo_Chr01:10278779..10279018
RNA-Seq ExpressionCmoCh01G012930
SyntenyCmoCh01G012930
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
GO:0033612 - receptor serine/threonine kinase binding (molecular function)
InterPro domainsIPR039616 - CLAVATA3/ESR (CLE)-related protein 1/3/4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN55081.1 hypothetical protein Csa_012463 [Cucumis sativus]9.4e-2077.38Show/hide
Query:  CRVK--LFVCLVVILLLCSSIAESRLLSS-----SSSSSVSKKNQSFVKNVEETLKFIIEEKEKLGRHFVSKRLSPGGPDPRHH
        C VK  LF  LV+ILLLCSSI+ESRLLSS     S SSS +KKN+ FVKN EE LKFIIEEKEKLGRHFVSKRLSPGGPDPRHH
Subjt:  CRVK--LFVCLVVILLLCSSIAESRLLSS-----SSSSSVSKKNQSFVKNVEETLKFIIEEKEKLGRHFVSKRLSPGGPDPRHH
TrEMBL top hitse value%identityAlignment
A0A0A0L4M1 Uncharacterized protein4.6e-2077.38Show/hide
Query:  CRVK--LFVCLVVILLLCSSIAESRLLSS-----SSSSSVSKKNQSFVKNVEETLKFIIEEKEKLGRHFVSKRLSPGGPDPRHH
        C VK  LF  LV+ILLLCSSI+ESRLLSS     S SSS +KKN+ FVKN EE LKFIIEEKEKLGRHFVSKRLSPGGPDPRHH
Subjt:  CRVK--LFVCLVVILLLCSSIAESRLLSS-----SSSSSVSKKNQSFVKNVEETLKFIIEEKEKLGRHFVSKRLSPGGPDPRHH
SwissProt top hitse value%identityAlignment
A0A072V9Z0 CLAVATA3/ESR (CLE)-related protein 331.5e-0440.79Show/hide
Query:  RVKLFVCLVVILLLCSSIAESRLLSSSSSSSVSKKNQSFVKNVEETLKFIIEEKEKLGRHFVSKRLSPGGPDPRHH
        R+  FV L   +L+C    ++R L SS SS  S  + +FV++V++ +K I+  K+ LG  + + RLSP GPDP HH
Subjt:  RVKLFVCLVVILLLCSSIAESRLLSSSSSSSVSKKNQSFVKNVEETLKFIIEEKEKLGRHFVSKRLSPGGPDPRHH
Arabidopsis top hitse value%identityAlignment
AT1G06225.1 CLAVATA3/ESR-RELATED 31.2e-0442.5Show/hide
Query:  VKLFVCLVVILLL-CSSIAESRLLSS----SSSSSVSKKNQSFVKNVEETLKFIIEEKEKLGRHFVSKRLSPGGPDPRHH
        +KL+VCLV++L+L  +S+ E R L +    S SS + K  +   + ++E       E+  LG    SKRLSPGGPDPRHH
Subjt:  VKLFVCLVVILLL-CSSIAESRLLSS----SSSSSVSKKNQSFVKNVEETLKFIIEEKEKLGRHFVSKRLSPGGPDPRHH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGTCGTGTAAAGCTCTTTGTTTGCCTTGTGGTGATTTTGCTCTTGTGTTCATCCATTGCTGAAAGCCGCTTGCTTTCTTCTTCTTCTTCTTCTTCTGTGAGTAA
GAAAAACCAATCATTTGTGAAGAATGTGGAAGAAACATTGAAGTTTATCATTGAAGAGAAGGAGAAGCTTGGAAGACATTTTGTGTCGAAGAGGCTAAGCCCTGGAGGGC
CTGATCCACGACATCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGTCGTGTAAAGCTCTTTGTTTGCCTTGTGGTGATTTTGCTCTTGTGTTCATCCATTGCTGAAAGCCGCTTGCTTTCTTCTTCTTCTTCTTCTTCTGTGAGTAA
GAAAAACCAATCATTTGTGAAGAATGTGGAAGAAACATTGAAGTTTATCATTGAAGAGAAGGAGAAGCTTGGAAGACATTTTGTGTCGAAGAGGCTAAGCCCTGGAGGGC
CTGATCCACGACATCATTGA
Protein sequenceShow/hide protein sequence
MACRVKLFVCLVVILLLCSSIAESRLLSSSSSSSVSKKNQSFVKNVEETLKFIIEEKEKLGRHFVSKRLSPGGPDPRHH