; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G013080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G013080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUbiquitin domain-containing protein
Genome locationCmo_Chr01:10372501..10377542
RNA-Seq ExpressionCmoCh01G013080
SyntenyCmoCh01G013080
Gene Ontology termsNA
InterPro domainsIPR032752 - DC-UbP/UBTD2, N-terminal domain
IPR038169 - DC-UbP/UBTD2, N-terminal domain superfamily
IPR039869 - Ubiquitin domain-containing protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146021.1 ubiquitin domain-containing protein 1 [Cucumis sativus]4.2e-5392.79Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP
        MGCAGSSQAKGDG VKKIRKPK WK+PQPITKTDL RMRDEFWDTAPHYGG KEIWDALRAAAEADLTLAQAIVDSAG+IVQSADLTICYDERGA+YELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP

Query:  KYVLSEPTNLI
        KYVLSEPTNL+
Subjt:  KYVLSEPTNLI

XP_008463752.1 PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis melo]3.2e-5393.69Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP
        MGCAGSSQAKGDG VKKIRKPK WK+PQPITKTDL RMRDEFWDTAPHYGG KEIWDALRAAAEADLTLAQAIVDSAG+IVQSADLTICYDERGA+YELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP

Query:  KYVLSEPTNLI
        KYVLSEPTNLI
Subjt:  KYVLSEPTNLI

XP_022144511.1 ubiquitin domain-containing protein 1-like [Momordica charantia]1.0e-5495.5Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP
        MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKT+L +MRDEFWDTAPHYGG KEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGA+YELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP

Query:  KYVLSEPTNLI
        KYVLSEPTNLI
Subjt:  KYVLSEPTNLI

XP_022941497.1 ubiquitin domain-containing protein 1-like [Cucurbita moschata]3.7e-57100Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP
        MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP

Query:  KYVLSEPTNLI
        KYVLSEPTNLI
Subjt:  KYVLSEPTNLI

XP_038898666.1 ubiquitin domain-containing protein 1-like [Benincasa hispida]5.0e-5494.59Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP
        MGCAGSSQAKG+GPVKKIRKPK WKHPQPI+KTDL RMRDEFWDTAPHYGG KEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGA+YELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP

Query:  KYVLSEPTNLI
        KYVLSEPTNLI
Subjt:  KYVLSEPTNLI

TrEMBL top hitse value%identityAlignment
A0A0A0KZH7 UBD domain-containing protein2.0e-5392.79Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP
        MGCAGSSQAKGDG VKKIRKPK WK+PQPITKTDL RMRDEFWDTAPHYGG KEIWDALRAAAEADLTLAQAIVDSAG+IVQSADLTICYDERGA+YELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP

Query:  KYVLSEPTNLI
        KYVLSEPTNL+
Subjt:  KYVLSEPTNLI

A0A1S3CJZ5 ubiquitin domain-containing protein 1-like1.6e-5393.69Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP
        MGCAGSSQAKGDG VKKIRKPK WK+PQPITKTDL RMRDEFWDTAPHYGG KEIWDALRAAAEADLTLAQAIVDSAG+IVQSADLTICYDERGA+YELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP

Query:  KYVLSEPTNLI
        KYVLSEPTNLI
Subjt:  KYVLSEPTNLI

A0A6J1CTM1 ubiquitin domain-containing protein 1-like4.9e-5595.5Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP
        MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKT+L +MRDEFWDTAPHYGG KEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGA+YELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP

Query:  KYVLSEPTNLI
        KYVLSEPTNLI
Subjt:  KYVLSEPTNLI

A0A6J1FML0 ubiquitin domain-containing protein 1-like1.8e-57100Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP
        MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP

Query:  KYVLSEPTNLI
        KYVLSEPTNLI
Subjt:  KYVLSEPTNLI

A0A6J1IYX4 ubiquitin domain-containing protein 1-like1.8e-57100Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP
        MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP

Query:  KYVLSEPTNLI
        KYVLSEPTNLI
Subjt:  KYVLSEPTNLI

SwissProt top hitse value%identityAlignment
Q4V8W7 Ubiquitin domain-containing protein 12.3e-2249.22Show/hide
Query:  GCAGSSQAKGDG--------------PVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQS
        GC G  +A+  G              P+KK  KPK WK   P+T+  L   RDEFWDTAP + G KEIWDAL+AAA A    D  LAQAIVD A + +  
Subjt:  GCAGSSQAKGDG--------------PVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQS

Query:  ADLTICYDERGARYELPKYVLSEPTNLI
          LT CYDE G RY+LP Y L+ P NLI
Subjt:  ADLTICYDERGARYELPKYVLSEPTNLI

Q5EAE3 Ubiquitin domain-containing protein 26.8e-2251.35Show/hide
Query:  GSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGARYELP
        G+  A G     K  KPK WK   P+T   L   RDEFWDTAP + G KEIWDAL+AAA A    D  LAQAI+D A + +    LT CYDE G RY+LP
Subjt:  GSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGARYELP

Query:  KYVLSEPTNLI
         Y L+ P N+I
Subjt:  KYVLSEPTNLI

Q6DG43 Ubiquitin domain-containing protein 21.4e-2252.25Show/hide
Query:  GSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGARYELP
        G+  A G     K  KPK WK   P+T   L   RDEFWDTAP + G KEIWDAL+AAA+A    D  LAQAI+D A + +    LT CYDE G RY+LP
Subjt:  GSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGARYELP

Query:  KYVLSEPTNLI
         Y LS P N+I
Subjt:  KYVLSEPTNLI

Q6PGH0 Ubiquitin domain-containing protein 26.8e-2251.35Show/hide
Query:  GSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGARYELP
        G+  A G     K  KPK WK   P+T   L   RDEFWDTAP + G KEIWDAL+AAA A    D  LAQAI+D A + +    LT CYDE G RY+LP
Subjt:  GSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGARYELP

Query:  KYVLSEPTNLI
         Y L+ P N+I
Subjt:  KYVLSEPTNLI

Q8WUN7 Ubiquitin domain-containing protein 26.8e-2251.35Show/hide
Query:  GSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGARYELP
        G+  A G     K  KPK WK   P+T   L   RDEFWDTAP + G KEIWDAL+AAA A    D  LAQAI+D A + +    LT CYDE G RY+LP
Subjt:  GSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGARYELP

Query:  KYVLSEPTNLI
         Y L+ P N+I
Subjt:  KYVLSEPTNLI

Arabidopsis top hitse value%identityAlignment
AT1G16960.1 Ubiquitin domain-containing protein7.9e-4269.64Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEA-DLTLAQAIVDSAGVIVQSADLTICYDERGARYEL
        MGC+ SS+   +G  +KIR+PK WKHPQPI++ +L +MR+EFWDTAPHYGG KEIWDALRAAAE  DL+LAQ I++SAGVIVQ+ DLTICYDE+G++YEL
Subjt:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEA-DLTLAQAIVDSAGVIVQSADLTICYDERGARYEL

Query:  PKYVLSEPTNLI
        PKYVL +P+NLI
Subjt:  PKYVLSEPTNLI

AT1G53400.1 Ubiquitin domain-containing protein5.5e-5181.82Show/hide
Query:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP
        MGCAGS+Q++ DG VKKIRKPK WKH QPITK +L ++R+EFWDTAPHYGG KEIWDALRAAAEAD++LAQAIVDSAGVIVQ+ DLT+CYDERGA+YELP
Subjt:  MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELP

Query:  KYVLSEPTNL
        KYVLSEPTNL
Subjt:  KYVLSEPTNL

AT5G45740.1 Ubiquitin domain-containing protein1.3e-4473.45Show/hide
Query:  MGCAGSSQAKGDGPV--KKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYE
        MGC GSSQA+ +G    KKI KPK W H +PIT+  L  MR+EFWDT+PHYGG +EIW+ALRAAAEADL LAQ IVDSAGVIVQ+ DLT+C+DERGARYE
Subjt:  MGCAGSSQAKGDGPV--KKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYE

Query:  LPKYVLSEPTNLI
        LP+YVLSEPTNLI
Subjt:  LPKYVLSEPTNLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTCTGTTTTCTGTAAGCGAAGCTTCTTCGCTCTCTTCCCAAATCTCCCATTCCCTCTTCCATCTCTTCTCATCCTTCCTTCTTTCTTTCTTCTTGTAATTTTGCG
CTCTTTAATGGGTTGTGCCGGATCGTCGCAGGCCAAAGGCGACGGGCCTGTGAAAAAAATTCGGAAGCCTAAAGCTTGGAAGCATCCCCAGCCAATAACAAAGACAGATC
TTGCGCGGATGCGTGATGAATTTTGGGATACTGCTCCTCATTATGGTGGCACAAAAGAGATATGGGATGCACTACGAGCTGCTGCAGAAGCTGATCTGACACTAGCACAA
GCAATAGTGGATAGTGCAGGCGTCATTGTACAAAGTGCTGATTTAACAATTTGTTACGATGAAAGAGGTGCAAGATACGAACTGCCCAAGTATGTTTTGAGCGAGCCAAC
CAACTTGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCTCTGTTTTCTGTAAGCGAAGCTTCTTCGCTCTCTTCCCAAATCTCCCATTCCCTCTTCCATCTCTTCTCATCCTTCCTTCTTTCTTTCTTCTTGTAATTTTGCG
CTCTTTAATGGGTTGTGCCGGATCGTCGCAGGCCAAAGGCGACGGGCCTGTGAAAAAAATTCGGAAGCCTAAAGCTTGGAAGCATCCCCAGCCAATAACAAAGACAGATC
TTGCGCGGATGCGTGATGAATTTTGGGATACTGCTCCTCATTATGGTGGCACAAAAGAGATATGGGATGCACTACGAGCTGCTGCAGAAGCTGATCTGACACTAGCACAA
GCAATAGTGGATAGTGCAGGCGTCATTGTACAAAGTGCTGATTTAACAATTTGTTACGATGAAAGAGGTGCAAGATACGAACTGCCCAAGTATGTTTTGAGCGAGCCAAC
CAACTTGATTTGAAGTAATAAGCAATGAGGAATTGTATGTTTTGCGTGCTAAATTGATTGTAAATCATCATGTATATTACAACCAACACTGTTTCATACCGTCTCTCACA
TTGATGGATTGGATTGGGCTTATTATTATTATTATTATTATGCTAACTCACTGTAGCTTCCTTTTGATCGAATCAAGTGTCTATTTGGAATTGTCACTTGTTGATGCCAC
CCCCAAAGCCTGGAATATTGCTTTACCC
Protein sequenceShow/hide protein sequence
MTSVFCKRSFFALFPNLPFPLPSLLILPSFFLLVILRSLMGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQ
AIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI