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CmoCh01G013110 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G013110
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTransmembrane protein
Genome locationCmo_Chr01:10402275..10402669
RNA-Seq ExpressionCmoCh01G013110
SyntenyCmoCh01G013110
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037451.1 hypothetical protein SDJN02_01078 [Cucurbita argyrosperma subsp. argyrosperma]2.8e-2898.53Show/hide
Query:  MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
        MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIE KSLLQQRQKQRLDHQFAESPNDAVQKVVK
Subjt:  MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
XP_022941532.1 uncharacterized protein LOC111446806 [Cucurbita moschata]3.3e-29100Show/hide
Query:  MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
        MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
Subjt:  MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
XP_022982102.1 uncharacterized protein LOC111481043 [Cucurbita maxima]2.1e-2897.06Show/hide
Query:  MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
        MTGEEVAGPAGPKVLRLLYF GAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAE+PNDAVQKVVK
Subjt:  MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
XP_023522217.1 uncharacterized protein LOC111786101 isoform X1 [Cucurbita pepo subsp. pepo]1.9e-2495.16Show/hide
Query:  MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDA
        MTGEEVAGPAGPKVLRLLYF GAGFVFTIAMNKWREIE KSLLQQ+QKQRLDHQFAESPNDA
Subjt:  MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDA
XP_023522224.1 uncharacterized protein LOC111786101 isoform X2 [Cucurbita pepo subsp. pepo]2.4e-2795.59Show/hide
Query:  MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
        MTGEEVAGPAGPKVLRLLYF GAGFVFTIAMNKWREIE KSLLQQ+QKQRLDHQFAESPNDAVQKVVK
Subjt:  MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
TrEMBL top hitse value%identityAlignment
A0A090ITT6 Uncharacterized protein1.2e-2176.47Show/hide
Query:  MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
        MTG+EV GPAGPK+LRLLYF GAGF+ + A+NKWREIE  SLLQQ+QKQRL+HQ +ESPNDAVQKVV+
Subjt:  MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
A0A0A0L208 Uncharacterized protein4.2e-2277.94Show/hide
Query:  MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
        MTGEEV GPAGPK+LRLLYF GAGF+ + A+NKWREIE  SLLQQ+QKQRL+HQ +ESPNDAVQKVV+
Subjt:  MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
A0A6J1C1U1 uncharacterized protein LOC1110065635.5e-2277.94Show/hide
Query:  MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
        M GEEV+GPAGPKVLR LYF GAGFVF IA+NKWRE+E +SLLQQ QKQ L+HQF+E+PNDAVQKVV+
Subjt:  MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
A0A6J1FMP5 uncharacterized protein LOC1114468061.6e-29100Show/hide
Query:  MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
        MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
Subjt:  MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
A0A6J1IVQ6 uncharacterized protein LOC1114810431.0e-2897.06Show/hide
Query:  MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
        MTGEEVAGPAGPKVLRLLYF GAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAE+PNDAVQKVVK
Subjt:  MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16916.1 unknown protein1.7e-1252.46Show/hide
Query:  GPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK
        GP  PK+LR++YFVGAGF+ T A+NKWRE+E  SLL+Q Q++         P D+VQK +K
Subjt:  GPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGGAGAAGAGGTTGCTGGTCCGGCGGGTCCTAAGGTTCTACGTCTGCTCTATTTCGTTGGTGCTGGATTTGTTTTCACAATCGCGATGAACAAGTGGCGGGAGAT
CGAGCACAAATCTCTGTTGCAACAACGGCAGAAGCAGAGATTGGATCATCAATTCGCGGAATCTCCTAATGATGCGGTACAGAAAGTCGTTAAGTGA
mRNA sequenceShow/hide mRNA sequence
GCGAAGGTGAAGAAAATCTGAAATTTTGACTTTTTCTAGAACCCTGGGTTAGGGCAACGAGACGACGGTGACGGCCTGAAGGAAGAAGCTAATGACGGGAGAAGAGGTTG
CTGGTCCGGCGGGTCCTAAGGTTCTACGTCTGCTCTATTTCGTTGGTGCTGGATTTGTTTTCACAATCGCGATGAACAAGTGGCGGGAGATCGAGCACAAATCTCTGTTG
CAACAACGGCAGAAGCAGAGATTGGATCATCAATTCGCGGAATCTCCTAATGATGCGGTACAGAAAGTCGTTAAGTGAACTTAG
Protein sequenceShow/hide protein sequence
MTGEEVAGPAGPKVLRLLYFVGAGFVFTIAMNKWREIEHKSLLQQRQKQRLDHQFAESPNDAVQKVVK