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CmoCh01G013230 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G013230
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 1-like
Genome locationCmo_Chr01:10511273..10514724
RNA-Seq ExpressionCmoCh01G013230
SyntenyCmoCh01G013230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066722.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucumis melo var. makuwa]2.9e-0644.3Show/hide
Query:  PTNPTTQIPNGSRIWVTVSGIAPELAFSTGGRV----------------TVVKDWLCVELEDPRPLPITSYVPLLLGPN
        P  P   +     I   +S IAPE AF TGGRV                   +DWLC+ELEDPRPL   SY+PLLLG N
Subjt:  PTNPTTQIPNGSRIWVTVSGIAPELAFSTGGRV----------------TVVKDWLCVELEDPRPLPITSYVPLLLGPN

XP_016903076.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucumis melo]2.9e-0644.3Show/hide
Query:  PTNPTTQIPNGSRIWVTVSGIAPELAFSTGGRV----------------TVVKDWLCVELEDPRPLPITSYVPLLLGPN
        P  P   +     I   +S IAPE AF TGGRV                   +DWLC+ELEDPRPL   SY+PLLLG N
Subjt:  PTNPTTQIPNGSRIWVTVSGIAPELAFSTGGRV----------------TVVKDWLCVELEDPRPLPITSYVPLLLGPN

XP_022136900.1 zinc finger BED domain-containing protein RICESLEEPER 1-like isoform X1 [Momordica charantia]3.2e-0543.04Show/hide
Query:  PTNPTTQIPNGSRIWVTVSGIAPELAFSTGGRV----------------TVVKDWLCVELEDPRPLPITSYVPLLLGPN
        P  P   +     I   +S IAPE+AFSTG RV                   +DWL +ELEDPRPL   SY+PLLLGP+
Subjt:  PTNPTTQIPNGSRIWVTVSGIAPELAFSTGGRV----------------TVVKDWLCVELEDPRPLPITSYVPLLLGPN

XP_022136908.1 zinc finger BED domain-containing protein RICESLEEPER 1-like isoform X2 [Momordica charantia]3.2e-0543.04Show/hide
Query:  PTNPTTQIPNGSRIWVTVSGIAPELAFSTGGRV----------------TVVKDWLCVELEDPRPLPITSYVPLLLGPN
        P  P   +     I   +S IAPE+AFSTG RV                   +DWL +ELEDPRPL   SY+PLLLGP+
Subjt:  PTNPTTQIPNGSRIWVTVSGIAPELAFSTGGRV----------------TVVKDWLCVELEDPRPLPITSYVPLLLGPN

XP_038898440.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida]2.7e-0746.84Show/hide
Query:  PTNPTTQIPNGSRIWVTVSGIAPELAFSTGGRV----------------TVVKDWLCVELEDPRPLPITSYVPLLLGPN
        P  P   +     I   +S IAPELAFSTGGRV                   +DWLC+ELEDPRPL   SY+PLLLG N
Subjt:  PTNPTTQIPNGSRIWVTVSGIAPELAFSTGGRV----------------TVVKDWLCVELEDPRPLPITSYVPLLLGPN

TrEMBL top hitse value%identityAlignment
A0A0A0L1Z7 BED-type domain-containing protein3.0e-0440.51Show/hide
Query:  PTNPTTQIPNGSRIWVTVSGIAPELAFSTGGRV----------------TVVKDWLCVELEDPRPLPITSYVPLLLGPN
        P  P   +     I   +S I PE AF T GRV                   +DWLC+ELEDPRPL   SY+PLLL  N
Subjt:  PTNPTTQIPNGSRIWVTVSGIAPELAFSTGGRV----------------TVVKDWLCVELEDPRPLPITSYVPLLLGPN

A0A1S4E4C0 zinc finger BED domain-containing protein RICESLEEPER 1-like1.4e-0644.3Show/hide
Query:  PTNPTTQIPNGSRIWVTVSGIAPELAFSTGGRV----------------TVVKDWLCVELEDPRPLPITSYVPLLLGPN
        P  P   +     I   +S IAPE AF TGGRV                   +DWLC+ELEDPRPL   SY+PLLLG N
Subjt:  PTNPTTQIPNGSRIWVTVSGIAPELAFSTGGRV----------------TVVKDWLCVELEDPRPLPITSYVPLLLGPN

A0A5A7VEC8 Zinc finger BED domain-containing protein RICESLEEPER 1-like1.4e-0644.3Show/hide
Query:  PTNPTTQIPNGSRIWVTVSGIAPELAFSTGGRV----------------TVVKDWLCVELEDPRPLPITSYVPLLLGPN
        P  P   +     I   +S IAPE AF TGGRV                   +DWLC+ELEDPRPL   SY+PLLLG N
Subjt:  PTNPTTQIPNGSRIWVTVSGIAPELAFSTGGRV----------------TVVKDWLCVELEDPRPLPITSYVPLLLGPN

A0A6J1C582 zinc finger BED domain-containing protein RICESLEEPER 1-like isoform X11.6e-0543.04Show/hide
Query:  PTNPTTQIPNGSRIWVTVSGIAPELAFSTGGRV----------------TVVKDWLCVELEDPRPLPITSYVPLLLGPN
        P  P   +     I   +S IAPE+AFSTG RV                   +DWL +ELEDPRPL   SY+PLLLGP+
Subjt:  PTNPTTQIPNGSRIWVTVSGIAPELAFSTGGRV----------------TVVKDWLCVELEDPRPLPITSYVPLLLGPN

A0A6J1C6S9 zinc finger BED domain-containing protein RICESLEEPER 1-like isoform X21.6e-0543.04Show/hide
Query:  PTNPTTQIPNGSRIWVTVSGIAPELAFSTGGRV----------------TVVKDWLCVELEDPRPLPITSYVPLLLGPN
        P  P   +     I   +S IAPE+AFSTG RV                   +DWL +ELEDPRPL   SY+PLLLGP+
Subjt:  PTNPTTQIPNGSRIWVTVSGIAPELAFSTGGRV----------------TVVKDWLCVELEDPRPLPITSYVPLLLGPN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTGTTACTTGCGTTCGCATTGTTAAGAGTGGAATGTAAAGAAAAAGTGGCGGTAGAGGAGGAAGCACAGAGCATCGCCATTATGTTCTCATCTACTCGTAGTCG
TAGTCGTAGTCAGGTTGGGTTAAGATTTAGGGCATTCCCAAATGGAGGTGGATGGAACTTGGAAGCAAGAAAAAGCCATTTCAGGGTCAATTCAGCGTTTCAAACCCGAA
CAGCACAGAACTCAGGGTCCAAGCCCGCGCCATTAAATCCAACCAACCCAACTACCCAAATTCCTAACGGGTCCAGGATCTGGGTAACGGTTTCAGGAATTGCACCCGAG
TTGGCATTTAGTACCGGTGGTCGAGTTACCGTGGTCAAAGATTGGCTTTGTGTAGAACTAGAAGATCCAAGGCCATTGCCTATCACATCTTATGTGCCACTTCTGCTTGG
ACCCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTGTTACTTGCGTTCGCATTGTTAAGAGTGGAATGTAAAGAAAAAGTGGCGGTAGAGGAGGAAGCACAGAGCATCGCCATTATGTTCTCATCTACTCGTAGTCG
TAGTCGTAGTCAGGTTGGGTTAAGATTTAGGGCATTCCCAAATGGAGGTGGATGGAACTTGGAAGCAAGAAAAAGCCATTTCAGGGTCAATTCAGCGTTTCAAACCCGAA
CAGCACAGAACTCAGGGTCCAAGCCCGCGCCATTAAATCCAACCAACCCAACTACCCAAATTCCTAACGGGTCCAGGATCTGGGTAACGGTTTCAGGAATTGCACCCGAG
TTGGCATTTAGTACCGGTGGTCGAGTTACCGTGGTCAAAGATTGGCTTTGTGTAGAACTAGAAGATCCAAGGCCATTGCCTATCACATCTTATGTGCCACTTCTGCTTGG
ACCCAATTAAATGTACAAATATCTATGCTCCAACCCCTCATTCCATTGTTTTTCTTTCATATCATGTTAGGTTGATGGATCTGTTAGTTTGTACCATGGCTTTTGATTGT
CTTTGTGATTTTCCATGTTGGTCGGGGAGGAGAACAAACCACTATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGTGTTTTAAAGCCTTGAGGGGAAGCCCGAAAG
GGAAAGCCCAAAGAGAACAATATCCGCTAGCGGTGGATCTGGGCCGTTACAAATGGTATTAGAGCCAGACACCGGACGATGTGTCAGCCTTCTCGCTATTCCCCGAAAGG
GGGTAGACACAAGGCGGTATGCCAGTAAGGACGTTGGGCCCACATCGATTGGAGGAAGGAAAGAGTGCCAGCGAGGACACTAGGCCCCAAAGGGGGGTTGGGGAGGAGAA
CAAACCACCATTTATAAGAGTGTGGAAACCTTTCCCTAGCAGACTCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACATTATCTCCTAGCGGT
GGATCTGGGCCGTTACAGTTTTTGACACTATAACCTAGTCCGTCCCAAATCAGCTATGTAGTGCACAATAGAACTGTAGTCCACTACTAGCAGATATTGTCTACTTTGGT
CCGTTATGTATCACTGTTAACCTCACGGTTTTAAACGCGTTTGTTAGAGAGAGGTTTTCACGTCCTTATAAGCAATGCTTCCTTCTCCTCTCTAACTGATGTGAGATCTC
ACAATCCACCCTCTTGGGAGCTAGCGTCCTCACTAGCACACCACATGATGTCTAGCTCTGATACCATTTGTAACAACTCAAGTCCATTGCTAGCAGATATTGTCCGCTTT
TAGTCTGTTACATATCGTCGTCAGTCTCACAGGTTTAAAATGCGTTAGTTAGAGAGATTTTCACACCTTGTAATGAATGTTTTGTTTCCCTCTTCAACCGAGAATGACTC
TGTAAACCATTGTAATGAATGTCTAATGGACAAGGATGATCATTTATAAGGTTTTTTTTCTTTCTTTTTGTGTTCA
Protein sequenceShow/hide protein sequence
MALLLAFALLRVECKEKVAVEEEAQSIAIMFSSTRSRSRSQVGLRFRAFPNGGGWNLEARKSHFRVNSAFQTRTAQNSGSKPAPLNPTNPTTQIPNGSRIWVTVSGIAPE
LAFSTGGRVTVVKDWLCVELEDPRPLPITSYVPLLLGPN