; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G013600 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G013600
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAuxin-responsive family protein
Genome locationCmo_Chr01:10727520..10728150
RNA-Seq ExpressionCmoCh01G013600
SyntenyCmoCh01G013600
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607972.1 Auxin-responsive protein SAUR76, partial [Cucurbita argyrosperma subsp. sororia]2.2e-5295.69Show/hide
Query:  MEEEHQEHQEQHQEH----QEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDP
        MEE+HQEHQEQHQEH    QEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDP
Subjt:  MEEEHQEHQEQHQEH----QEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDP

Query:  NLTFDSNLEELAELYV
        NLTFDSNLEELAELYV
Subjt:  NLTFDSNLEELAELYV

KAG7024703.1 hypothetical protein SDJN02_13521, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-4064.1Show/hide
Query:  MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQ--EQHQEHQEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALI
        M K+NSLLRKCK+LSRQLG   S    +SKST E LWV +  M EEH+EH+  E+H EH+E E  ++VS +NVIIYVGSTRKRY+++S +L+HPLL ALI
Subjt:  MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQ--EQHQEHQEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALI

Query:  HKSKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV
         KSK  +  E    ++  IS+RCEVVLFDHLLWMLENSDPN+ FDSNLEELAELYV
Subjt:  HKSKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV

KAG7037485.1 hypothetical protein SDJN02_01112, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-7396.75Show/hide
Query:  MKKINSLLRKCKTLSRQLGSFRSKSKSTTEHLWVSQTKMEEEHQEHQEQHQEH----QEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHK
        MKKINSLLRKCKTLSRQLGSFRSKSKSTTEHLWVSQTKMEE+HQEHQEQHQEH    QEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHK
Subjt:  MKKINSLLRKCKTLSRQLGSFRSKSKSTTEHLWVSQTKMEEEHQEHQEQHQEH----QEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHK

Query:  SKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV
        SKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV
Subjt:  SKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV

XP_023536060.1 auxin-responsive protein SAUR71 [Cucurbita pepo subsp. pepo]4.7e-3963.92Show/hide
Query:  MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHK
        M K+NSLLRKCK+LSRQLG   S    +SKST E LWV    MEE   E +E+H+E +EHE  +KVS +NVIIYVGSTRKRY+++S +L+HPLL ALI K
Subjt:  MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHK

Query:  SKA----NEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV
        SK     NED      ++  IS+RCEVVLFDHLLWMLENSDPN+ FDSNLEELAELYV
Subjt:  SKA----NEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV

XP_038899559.1 auxin-responsive protein SAUR78 [Benincasa hispida]1.8e-3864.15Show/hide
Query:  MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHK
        MKKIN LLRKCK+LSRQLG   S    +SKST E LWV  TKMEEE  E Q+Q        +L+KVS N+VI+YVGSTRKRY+++S +L+HPLL ALI K
Subjt:  MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHK

Query:  SK-----ANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV
        SK     AN+D E      + IS+RCEVVLFDHLLWMLENSDPN++FDSNLEELAELYV
Subjt:  SK-----ANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV

TrEMBL top hitse value%identityAlignment
A0A1S3B9J9 uncharacterized protein LOC1034876594.2e-3357.93Show/hide
Query:  MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQKVS-SNNVIIYVGSTRKRYSLTSNHLTHPLLTALIH
        MKKINSLLRKCK+LSRQLG   S    +SKST E LWV + K EE+ ++  +           QKVS +NNV++YVGSTRK+Y++ S +L HPLL ALI 
Subjt:  MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQKVS-SNNVIIYVGSTRKRYSLTSNHLTHPLLTALIH

Query:  KSKA-----NEDCETHTHNN----NAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV
        KSK+     + D E   H++    + I +RCEVVLFDHLLWMLENSDPN+TFDSNLEELAELYV
Subjt:  KSKA-----NEDCETHTHNN----NAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV

A0A2P5DV80 Small auxin-up RNA2.1e-2449.35Show/hide
Query:  MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHK
        MKKIN LLRKCK+LSRQLG   S    +SKST E  W+             +QH   Q+  +L K S     I+VGSTRKRY +++ +L+HPLL ALI K
Subjt:  MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHK

Query:  SKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV
        SK N         +  + ++CEVVLFDHLLWMLEN+DP      +LEELA LYV
Subjt:  SKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV

A0A6J1C0S4 uncharacterized protein LOC1110073987.3e-3863.75Show/hide
Query:  MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLW-VSQTKMEEEHQEHQEQHQEHQEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIH
        MKKINSLLRKCK+LSRQLG   S    +SKST E LW +  TKMEEE +E +E HQ+ Q    L+KV  +NVI+YVGSTRK+Y ++S  L+HPL+ ALI 
Subjt:  MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLW-VSQTKMEEEHQEHQEQHQEHQEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIH

Query:  KSKA-----NEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV
        KSK+     +EDCE       AIS+RCEVVLFDHLLWMLENSDPN+TFDSNLEELA+LYV
Subjt:  KSKA-----NEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV

A0A7N2R3M3 Uncharacterized protein1.2e-2449.68Show/hide
Query:  MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHK
        MKKIN +LRKCK+LSRQLG   S    +SKS+ + LW       +  Q+H  +H E                I+VGSTRKRY ++S +L+HPL+ ALI K
Subjt:  MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHK

Query:  SKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYVS
        +   +  E    NNN + ++CEVVLFDHLLWMLEN+DPNL+ +S LEELAELY+S
Subjt:  SKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYVS

B9RI47 Uncharacterized protein1.9e-2551.3Show/hide
Query:  MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHK
        MKKIN +LRKCK+LSRQLG   S    +SKST E LW           +H+E+ +EHQ              ++VGSTRKRY ++S +L+HPL+ ALI K
Subjt:  MKKINSLLRKCKTLSRQLGSFRS----KSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHK

Query:  SKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV
        SK  +           + ++CEVVLFDHLLWMLEN+DPNL+FDS LEELAELYV
Subjt:  SKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYV

SwissProt top hitse value%identityAlignment
Q29PU2 Auxin-responsive protein SAUR763.8e-0730.72Show/hide
Query:  MKKINSLLRKCKTLSRQLGSFRSKSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQKVSS----NNVIIYVGSTRKRYSLTSNHLTHPLLTALIHK
        M K  + L K K++ ++L SF +K                        Q      H R   VS+    +   +YVG TR+ Y ++S+ ++HPL   L   
Subjt:  MKKINSLLRKCKTLSRQLGSFRSKSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQKVSS----NNVIIYVGSTRKRYSLTSNHLTHPLLTALIHK

Query:  SKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELY
        +  +  C +    + +IS+ CEVVLF+HLLWMLEN+D + +   ++ EL E Y
Subjt:  SKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELY

Q9C9E1 Auxin-responsive protein SAUR782.0e-0837.21Show/hide
Query:  SNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELY
        +N  ++YVG TR+ Y L  + ++HPL   L+ +S +          +  I + CEVVLF+HLLWML++         ++EELAE Y
Subjt:  SNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELY

Q9LQI6 Auxin-responsive protein SAUR771.8e-0939.08Show/hide
Query:  IIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENS-----DPNLTFDSNLEELAELY
        ++YVG +R+ Y L+S+ + HPL   L+ +S    +     H+   + + CEVVLF+HLLWML+NS     D +     ++EELAE Y
Subjt:  IIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENS-----DPNLTFDSNLEELAELY

Arabidopsis top hitse value%identityAlignment
AT1G17345.1 SAUR-like auxin-responsive protein family1.3e-1039.08Show/hide
Query:  IIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENS-----DPNLTFDSNLEELAELY
        ++YVG +R+ Y L+S+ + HPL   L+ +S    +     H+   + + CEVVLF+HLLWML+NS     D +     ++EELAE Y
Subjt:  IIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENS-----DPNLTFDSNLEELAELY

AT1G72430.1 SAUR-like auxin-responsive protein family1.4e-0937.21Show/hide
Query:  SNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELY
        +N  ++YVG TR+ Y L  + ++HPL   L+ +S +          +  I + CEVVLF+HLLWML++         ++EELAE Y
Subjt:  SNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELY

AT3G12955.1 SAUR-like auxin-responsive protein family1.2e-1134.23Show/hide
Query:  KINSLLRKCKTLSRQLGSFRSKSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANED
        ++  +LR+CK++S QLG    +S S T     S  +  ++H +  +Q      ++           + VG T+K Y ++  HL HPLL AL+ K +  E+
Subjt:  KINSLLRKCKTLSRQLGSFRSKSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANED

Query:  CETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYVS
         + +   +  I+++CEVVLFDHLLWMLE  D     +S L++ A LY+S
Subjt:  CETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYVS

AT5G20810.1 SAUR-like auxin-responsive protein family6.8e-0429.55Show/hide
Query:  QEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSN
        Q  E    V   N+ +YVG   +R+ + +++L+H L   L+ K++     E     + A+++ CEV  F +LL  +EN+  +L  D N
Subjt:  QEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSN

AT5G20820.1 SAUR-like auxin-responsive protein family2.7e-0830.72Show/hide
Query:  MKKINSLLRKCKTLSRQLGSFRSKSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQKVSS----NNVIIYVGSTRKRYSLTSNHLTHPLLTALIHK
        M K  + L K K++ ++L SF +K                        Q      H R   VS+    +   +YVG TR+ Y ++S+ ++HPL   L   
Subjt:  MKKINSLLRKCKTLSRQLGSFRSKSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQKVSS----NNVIIYVGSTRKRYSLTSNHLTHPLLTALIHK

Query:  SKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELY
        +  +  C +    + +IS+ CEVVLF+HLLWMLEN+D + +   ++ EL E Y
Subjt:  SKANEDCETHTHNNNAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGATAAACTCTCTATTGAGGAAATGCAAGACCCTTTCAAGGCAATTGGGAAGCTTCAGATCCAAATCCAAATCCACAACAGAACATCTCTGGGTTTCTCAAAC
AAAAATGGAAGAAGAACATCAAGAACATCAAGAACAACATCAAGAACATCAAGAACATGAAAGGCTTCAAAAGGTGAGTAGCAACAATGTAATTATATATGTTGGAAGCA
CAAGGAAGAGATACTCATTAACTTCAAACCACTTGACCCATCCTTTGTTAACTGCTTTGATCCACAAATCCAAAGCCAATGAAGATTGTGAGACTCATACTCATAACAAT
AATGCCATTTCATTGAGATGTGAAGTTGTTCTCTTTGATCATCTCTTGTGGATGTTGGAAAACTCTGATCCAAATCTCACTTTTGATTCAAATTTGGAAGAGTTAGCTGA
GCTTTATGTATCGTATAAATTGTTTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGATAAACTCTCTATTGAGGAAATGCAAGACCCTTTCAAGGCAATTGGGAAGCTTCAGATCCAAATCCAAATCCACAACAGAACATCTCTGGGTTTCTCAAAC
AAAAATGGAAGAAGAACATCAAGAACATCAAGAACAACATCAAGAACATCAAGAACATGAAAGGCTTCAAAAGGTGAGTAGCAACAATGTAATTATATATGTTGGAAGCA
CAAGGAAGAGATACTCATTAACTTCAAACCACTTGACCCATCCTTTGTTAACTGCTTTGATCCACAAATCCAAAGCCAATGAAGATTGTGAGACTCATACTCATAACAAT
AATGCCATTTCATTGAGATGTGAAGTTGTTCTCTTTGATCATCTCTTGTGGATGTTGGAAAACTCTGATCCAAATCTCACTTTTGATTCAAATTTGGAAGAGTTAGCTGA
GCTTTATGTATCGTATAAATTGTTTATTTGA
Protein sequenceShow/hide protein sequence
MKKINSLLRKCKTLSRQLGSFRSKSKSTTEHLWVSQTKMEEEHQEHQEQHQEHQEHERLQKVSSNNVIIYVGSTRKRYSLTSNHLTHPLLTALIHKSKANEDCETHTHNN
NAISLRCEVVLFDHLLWMLENSDPNLTFDSNLEELAELYVSYKLFI