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CmoCh01G013770 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G013770
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTubby-like F-box protein
Genome locationCmo_Chr01:10838474..10839085
RNA-Seq ExpressionCmoCh01G013770
SyntenyCmoCh01G013770
Gene Ontology termsNA
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607987.1 hypothetical protein SDJN03_01329, partial [Cucurbita argyrosperma subsp. sororia]1.4e-9998.95Show/hide
Query:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
        MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
Subjt:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI

Query:  VECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSAAA
        VECKPSDP EWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSF APSAAA
Subjt:  VECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSAAA

KAG7037505.1 hypothetical protein SDJN02_01132, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-10599Show/hide
Query:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
        MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
Subjt:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV

Query:  ASTAGVRLLIVECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSAA
        ASTAGVRLLIVECKPSDP EWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSF APSAA
Subjt:  ASTAGVRLLIVECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSAA

Query:  A
        A
Subjt:  A

XP_022940745.1 uncharacterized protein LOC111446248 [Cucurbita moschata]1.1e-107100Show/hide
Query:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
        MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
Subjt:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV

Query:  ASTAGVRLLIVECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSAA
        ASTAGVRLLIVECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSAA
Subjt:  ASTAGVRLLIVECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSAA

Query:  AER
        AER
Subjt:  AER

XP_022981712.1 uncharacterized protein LOC111480776 [Cucurbita maxima]2.2e-10598.52Show/hide
Query:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
        MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
Subjt:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV

Query:  ASTAGVRLLIVECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSAA
        ASTAGVRLLIVECKPSD AEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGC EFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSF APSAA
Subjt:  ASTAGVRLLIVECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSAA

Query:  AER
        AER
Subjt:  AER

XP_023523437.1 uncharacterized protein LOC111787650 [Cucurbita pepo subsp. pepo]2.1e-10396.55Show/hide
Query:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
        MT +IEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
Subjt:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV

Query:  ASTAGVRLLIVECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSAA
        AS AGVRLLIVECKPSDPAEWRRRLESRGADDR NWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPV+FDEIVSTVIDFIVSNGGS  APSAA
Subjt:  ASTAGVRLLIVECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSAA

Query:  AER
        AER
Subjt:  AER

TrEMBL top hitse value%identityAlignment
A0A0A0L485 Uncharacterized protein6.3e-9084.42Show/hide
Query:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
        M EEIE+R +M+IAMKGHPGTGKSTLAQ +ASLLK PLIDKDDVKDCAA LAAA+TA+LVNDLSYDVV+RLASTQLRLGLSV+VDTPLS RSH C L DV
Subjt:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV

Query:  ASTAGVRLLIVECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSA
        AS +G R+LIVEC+PSD  EWRRRLESRG DD+TNWHKPSTWR+IEMLLESYGGCTEFDVGDVPRLVVDTTAPV FDEIVSTV+DFIVSNGGSF AP A
Subjt:  ASTAGVRLLIVECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSA

A0A5A7SP11 Uncharacterized protein2.2e-8786.84Show/hide
Query:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
        M+IAMKGHPGTGKSTLAQ +ASLLKIPLIDKDDVKDCAA LAAA+TA LVNDLSYDVV+RLASTQLRLGLSV+VDTPLSRRSH C L DVAS +G R+LI
Subjt:  MLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI

Query:  VECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSAA
        VEC+PSD   WRRRLESRG DDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPV FDEIVSTV+DFIVSNGGSF AP  A
Subjt:  VECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSAA

A0A6J1C0A8 uncharacterized protein LOC1110072986.5e-8784.62Show/hide
Query:  EIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVAST
        EIE++TKM+IAMKGHPGTGKST+AQ+LASLLKIPLIDKDDVKDCAAA++AA +AAL+NDLSYDVV+RLASTQLRLGLSV++DTPLSRRSH   L D+AS+
Subjt:  EIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVAST

Query:  AGVRLLIVECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPS
        AG RLLIVEC+PSD AEWRRRLESRGA DRTNWHKPSTWREIEMLLE YGGCTEFDVGDVPRLVVDTTAPVSFDE VSTVIDFI SN  SF  PS
Subjt:  AGVRLLIVECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPS

A0A6J1FRG5 uncharacterized protein LOC1114462485.1e-108100Show/hide
Query:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
        MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
Subjt:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV

Query:  ASTAGVRLLIVECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSAA
        ASTAGVRLLIVECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSAA
Subjt:  ASTAGVRLLIVECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSAA

Query:  AER
        AER
Subjt:  AER

A0A6J1IUR8 uncharacterized protein LOC1114807761.1e-10598.52Show/hide
Query:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
        MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV
Subjt:  MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDV

Query:  ASTAGVRLLIVECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSAA
        ASTAGVRLLIVECKPSD AEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGC EFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSF APSAA
Subjt:  ASTAGVRLLIVECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSAA

Query:  AER
        AER
Subjt:  AER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGAAGAAATTGAAGATAGAACGAAAATGCTAATAGCGATGAAAGGCCATCCAGGCACCGGCAAAAGCACTCTGGCCCAAACCCTAGCCTCCCTCCTCAAAATCCC
CCTAATTGACAAAGACGACGTCAAGGACTGCGCCGCCGCTCTCGCCGCCGCATCAACCGCCGCCCTCGTCAACGACCTCTCCTACGACGTCGTTTACCGTCTCGCCTCGA
CGCAGCTTCGCCTCGGCCTCAGCGTCATCGTCGACACGCCTCTCTCCCGTCGATCTCACTTTTGCCATCTTACCGACGTCGCTTCCACCGCCGGCGTGCGGCTTCTCATC
GTCGAGTGTAAGCCATCTGATCCGGCGGAGTGGAGGCGGAGGCTTGAGAGTCGCGGCGCCGATGATCGGACGAATTGGCACAAGCCGTCCACGTGGCGAGAAATTGAGAT
GCTCTTGGAAAGTTACGGCGGATGTACGGAATTCGACGTCGGAGATGTTCCGAGGCTGGTGGTTGACACCACCGCGCCGGTTAGTTTCGATGAGATTGTTTCTACTGTGA
TCGATTTCATTGTATCTAACGGTGGTTCTTTCATTGCTCCGTCGGCGGCGGCGGAGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGAAGAAATTGAAGATAGAACGAAAATGCTAATAGCGATGAAAGGCCATCCAGGCACCGGCAAAAGCACTCTGGCCCAAACCCTAGCCTCCCTCCTCAAAATCCC
CCTAATTGACAAAGACGACGTCAAGGACTGCGCCGCCGCTCTCGCCGCCGCATCAACCGCCGCCCTCGTCAACGACCTCTCCTACGACGTCGTTTACCGTCTCGCCTCGA
CGCAGCTTCGCCTCGGCCTCAGCGTCATCGTCGACACGCCTCTCTCCCGTCGATCTCACTTTTGCCATCTTACCGACGTCGCTTCCACCGCCGGCGTGCGGCTTCTCATC
GTCGAGTGTAAGCCATCTGATCCGGCGGAGTGGAGGCGGAGGCTTGAGAGTCGCGGCGCCGATGATCGGACGAATTGGCACAAGCCGTCCACGTGGCGAGAAATTGAGAT
GCTCTTGGAAAGTTACGGCGGATGTACGGAATTCGACGTCGGAGATGTTCCGAGGCTGGTGGTTGACACCACCGCGCCGGTTAGTTTCGATGAGATTGTTTCTACTGTGA
TCGATTTCATTGTATCTAACGGTGGTTCTTTCATTGCTCCGTCGGCGGCGGCGGAGAGATGA
Protein sequenceShow/hide protein sequence
MTEEIEDRTKMLIAMKGHPGTGKSTLAQTLASLLKIPLIDKDDVKDCAAALAAASTAALVNDLSYDVVYRLASTQLRLGLSVIVDTPLSRRSHFCHLTDVASTAGVRLLI
VECKPSDPAEWRRRLESRGADDRTNWHKPSTWREIEMLLESYGGCTEFDVGDVPRLVVDTTAPVSFDEIVSTVIDFIVSNGGSFIAPSAAAER