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CmoCh01G013870 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G013870
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCYSTM domain-containing protein
Genome locationCmo_Chr01:10948589..10949787
RNA-Seq ExpressionCmoCh01G013870
SyntenyCmoCh01G013870
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608000.1 60S ribosomal protein L27-3, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2196.67Show/hide
Query:  MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEG
        MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPA  PAPAVTKSRGMAEGCLEG
Subjt:  MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEG

XP_022137938.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia]1.2e-1670.67Show/hide
Query:  MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF
        M+SAQPA VYPPPSTAP SYAAPPPAGYP R GGD S P PVPA   TKSRG  +G  +GCCA +CCCC L+ CF
Subjt:  MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF

XP_022940099.1 cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucurbita moschata]1.4e-33100Show/hide
Query:  MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF
        MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF
Subjt:  MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF

XP_022981140.1 cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucurbita maxima]2.0e-3297.33Show/hide
Query:  MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF
        M+SAQPAEVYPPPSTAPP YAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF
Subjt:  MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF

XP_023523698.1 cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucurbita pepo subsp. pepo]5.4e-3398.67Show/hide
Query:  MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF
        M+SAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF
Subjt:  MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF

TrEMBL top hitse value%identityAlignment
A0A0A0L4C6 CYSTM domain-containing protein8.7e-1364.94Show/hide
Query:  MNSAQPAEV-YPPP-STAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF
        M+SAQPA V YPPP ST P SY+APPPAGYP R GGD S     P PA TKSRG  +G  +GCCA LCCCC L+ CF
Subjt:  MNSAQPAEV-YPPP-STAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF

A0A6J1CBQ4 cysteine-rich and transmembrane domain-containing protein WIH2-like5.8e-1770.67Show/hide
Query:  MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF
        M+SAQPA VYPPPSTAP SYAAPPPAGYP R GGD S P PVPA   TKSRG  +G  +GCCA +CCCC L+ CF
Subjt:  MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF

A0A6J1FJ29 cysteine-rich and transmembrane domain-containing protein WIH1-like6.9e-34100Show/hide
Query:  MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF
        MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF
Subjt:  MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF

A0A6J1IYM3 cysteine-rich and transmembrane domain-containing protein WIH1-like9.9e-3397.33Show/hide
Query:  MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF
        M+SAQPAEVYPPPSTAPP YAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF
Subjt:  MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF

A0A7N2LG73 CYSTM domain-containing protein1.4e-1057.14Show/hide
Query:  MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVS--PPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF
        M+S++PA  YPPPSTAP  Y APPPAGYP + G   S  PP PV     TKSRG  +G  +GCCA LCCCC ++ CF
Subjt:  MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVS--PPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G32190.1 unknown protein1.3e-0543.66Show/hide
Query:  QPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF
        Q +  YP P  +   Y  PPP GYP     D+S      AP  TKS+G  +G L+GC A +CCCC L+ CF
Subjt:  QPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF

AT2G32210.1 unknown protein6.6e-0543.66Show/hide
Query:  QPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF
        Q +  YP P  +   Y APPP GYP     D S      A   TKS+G  +G L+GC A +CCCC L+ CF
Subjt:  QPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF

AT3G22235.1 BEST Arabidopsis thaliana protein match is: pathogen and circadian controlled 1 (TAIR:AT3G22231.1)1.0e-0544.78Show/hide
Query:  VYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF
        V  P  T+   Y +PPP GYP R      PPA   A   T S+G+     EGCCA +CCCC L+ CF
Subjt:  VYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF

AT3G22235.2 FUNCTIONS IN: molecular_function unknown1.0e-0544.78Show/hide
Query:  VYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF
        V  P  T+   Y +PPP GYP R      PPA   A   T S+G+     EGCCA +CCCC L+ CF
Subjt:  VYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF

AT3G22240.1 unknown protein2.1e-0646.27Show/hide
Query:  VYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF
        V  P  T+   Y +PPP GYP R      PPA   A   TKS+G  +G  +GCCA +CCCC L+ CF
Subjt:  VYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCCGCTCAGCCTGCAGAAGTTTATCCTCCACCCTCCACCGCGCCACCCAGTTATGCAGCTCCGCCGCCGGCGGGGTATCCGGTAAGATACGGCGGAGACGTCTC
TCCACCTGCTCCTGTTCCTGCTCCGGCTGTGACCAAGTCTAGAGGCATGGCCGAGGGCTGTTTGGAAGGCTGTTGTGCGGGGTTGTGCTGTTGCTGTGCATTGGAAACAT
GCTTCTAG
mRNA sequenceShow/hide mRNA sequence
TCAAACAAACTTAAAACGTAAATTATTTTCTAATATAATTTTTATTTTCTGAAGATGAATTCCGCTCAGCCTGCAGAAGTTTATCCTCCACCCTCCACCGCGCCACCCAG
TTATGCAGCTCCGCCGCCGGCGGGGTATCCGGTAAGATACGGCGGAGACGTCTCTCCACCTGCTCCTGTTCCTGCTCCGGCTGTGACCAAGTCTAGAGGCATGGCCGAGG
GCTGTTTGGAAGGCTGTTGTGCGGGGTTGTGCTGTTGCTGTGCATTGGAAACATGCTTCTAGTCACGTGAAGGAATCAAAGATGCGATGGCTCTCAAGTCCCAAC
Protein sequenceShow/hide protein sequence
MNSAQPAEVYPPPSTAPPSYAAPPPAGYPVRYGGDVSPPAPVPAPAVTKSRGMAEGCLEGCCAGLCCCCALETCF