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CmoCh01G014010 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G014010
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAt4g19430
Genome locationCmo_Chr01:11025502..11025912
RNA-Seq ExpressionCmoCh01G014010
SyntenyCmoCh01G014010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052276.1 hypothetical protein E6C27_scaffold207G001040 [Cucumis melo var. makuwa]8.3e-3260.29Show/hide
Query:  MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC
        MS+S Q+LGL  L+KK +K  +RE  +RER G++S  +    ++ + GD KGRRR     RRRK  QFG  R VL  N WYFTSTIS+ILRKAKAFYNEC
Subjt:  MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC

Query:  CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM
        CCDAYEDERM       +DPYFSMPV PYTTMANC+
Subjt:  CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM

KAG6608012.1 hypothetical protein SDJN03_01354, partial [Cucurbita argyrosperma subsp. sororia]6.5e-6997.79Show/hide
Query:  MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC
        MSVSIQVLGL SLQKKEKKCHRRE+LERERTGHFSTSQHGHHESEQPGDGKGRRR KKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC
Subjt:  MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC

Query:  CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM
        CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM
Subjt:  CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM

KGN55571.1 hypothetical protein Csa_012627 [Cucumis sativus]4.7e-3563.24Show/hide
Query:  MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC
        MSVS Q+L L  L+KK KK  +RE L+RE  G++S       ++E+ G+ KGRRR K    RRK  QFG  R VL  N WYFTSTIS+ILRKAKAFYNEC
Subjt:  MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC

Query:  CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM
        CCDA+EDERMK+ EV  +DPYFSMPV PYTTMANCM
Subjt:  CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM

TYK01842.1 hypothetical protein E5676_scaffold113G00900 [Cucumis melo var. makuwa]8.3e-3260.29Show/hide
Query:  MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC
        MS+S Q+LGL  L+KK +K  +RE  +RER G++S  +    ++ + GD KGRRR     RRRK  QFG  R VL  N WYFTSTIS+ILRKAKAFYNEC
Subjt:  MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC

Query:  CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM
        CCDAYEDERM       +DPYFSMPV PYTTMANC+
Subjt:  CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM

XP_022940822.1 uncharacterized protein LOC111446301 [Cucurbita moschata]1.5e-70100Show/hide
Query:  MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC
        MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC
Subjt:  MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC

Query:  CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM
        CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM
Subjt:  CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM

TrEMBL top hitse value%identityAlignment
A0A0A0L609 Uncharacterized protein2.3e-3563.24Show/hide
Query:  MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC
        MSVS Q+L L  L+KK KK  +RE L+RE  G++S       ++E+ G+ KGRRR K    RRK  QFG  R VL  N WYFTSTIS+ILRKAKAFYNEC
Subjt:  MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC

Query:  CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM
        CCDA+EDERMK+ EV  +DPYFSMPV PYTTMANCM
Subjt:  CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM

A0A5A7UDK1 Uncharacterized protein4.0e-3260.29Show/hide
Query:  MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC
        MS+S Q+LGL  L+KK +K  +RE  +RER G++S  +    ++ + GD KGRRR     RRRK  QFG  R VL  N WYFTSTIS+ILRKAKAFYNEC
Subjt:  MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC

Query:  CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM
        CCDAYEDERM       +DPYFSMPV PYTTMANC+
Subjt:  CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM

A0A5D3BSQ8 Uncharacterized protein4.0e-3260.29Show/hide
Query:  MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC
        MS+S Q+LGL  L+KK +K  +RE  +RER G++S  +    ++ + GD KGRRR     RRRK  QFG  R VL  N WYFTSTIS+ILRKAKAFYNEC
Subjt:  MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC

Query:  CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM
        CCDAYEDERM       +DPYFSMPV PYTTMANC+
Subjt:  CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM

A0A6J1FKP2 uncharacterized protein LOC1114463017.5e-71100Show/hide
Query:  MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC
        MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC
Subjt:  MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNEC

Query:  CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM
        CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM
Subjt:  CCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMANCM

A0A7J7CMI0 Uncharacterized protein3.9e-1148.31Show/hide
Query:  EQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNECCCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMA
        EQ GD + ++R  K  RR      G   ++L   +WY TSTISYILRKA+AFYNE CCD ++D  +   E+ +VDPYF +PV P  T+A
Subjt:  EQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNECCCDAYEDERMKRVEVAMVDPYFSMPVFPYTTMA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G19430.1 unknown protein4.7e-0945.07Show/hide
Query:  KQGRRRKTTQFG-AARQVLQWN-MWYFTSTISYILRKAKAFYNECCCDAYEDERMKRVEVAMVDPYFSMPV
        K G+    T++G   R V + + +WY   +IS+ILRKA+AFYNE CCD Y +       +A+V+PYFS+PV
Subjt:  KQGRRRKTTQFG-AARQVLQWN-MWYFTSTISYILRKAKAFYNECCCDAYEDERMKRVEVAMVDPYFSMPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTTTCCATCCAAGTTCTAGGCTTAAAAAGCCTTCAGAAGAAAGAAAAAAAGTGCCATAGGAGAGAGCTTTTAGAGAGAGAAAGAACTGGTCATTTCAGCACTTC
CCAACATGGGCATCATGAGAGTGAGCAGCCTGGAGATGGCAAGGGAAGAAGAAGGGTGAAGAAGCAGGGACGAAGAAGAAAGACGACTCAGTTTGGAGCTGCTAGACAAG
TTCTTCAATGGAACATGTGGTACTTTACCTCAACAATCAGCTATATTTTAAGGAAGGCCAAAGCCTTTTACAATGAGTGTTGCTGTGATGCTTATGAAGATGAGAGGATG
AAGAGAGTTGAAGTGGCTATGGTTGATCCTTATTTCTCAATGCCTGTTTTTCCTTATACTACTATGGCTAATTGTATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTTTCCATCCAAGTTCTAGGCTTAAAAAGCCTTCAGAAGAAAGAAAAAAAGTGCCATAGGAGAGAGCTTTTAGAGAGAGAAAGAACTGGTCATTTCAGCACTTC
CCAACATGGGCATCATGAGAGTGAGCAGCCTGGAGATGGCAAGGGAAGAAGAAGGGTGAAGAAGCAGGGACGAAGAAGAAAGACGACTCAGTTTGGAGCTGCTAGACAAG
TTCTTCAATGGAACATGTGGTACTTTACCTCAACAATCAGCTATATTTTAAGGAAGGCCAAAGCCTTTTACAATGAGTGTTGCTGTGATGCTTATGAAGATGAGAGGATG
AAGAGAGTTGAAGTGGCTATGGTTGATCCTTATTTCTCAATGCCTGTTTTTCCTTATACTACTATGGCTAATTGTATGTAA
Protein sequenceShow/hide protein sequence
MSVSIQVLGLKSLQKKEKKCHRRELLERERTGHFSTSQHGHHESEQPGDGKGRRRVKKQGRRRKTTQFGAARQVLQWNMWYFTSTISYILRKAKAFYNECCCDAYEDERM
KRVEVAMVDPYFSMPVFPYTTMANCM