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CmoCh01G014370 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G014370
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTransmembrane protein
Genome locationCmo_Chr01:11227480..11229512
RNA-Seq ExpressionCmoCh01G014370
SyntenyCmoCh01G014370
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008444129.1 PREDICTED: uncharacterized protein LOC103487570 isoform X2 [Cucumis melo]6.4e-3990.53Show/hide
Query:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS
        MGSQE VKH+E+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAP+ S+ +S+SHS
Subjt:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS

XP_022138625.1 uncharacterized protein LOC111009737 [Momordica charantia]4.6e-3791.58Show/hide
Query:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS
        MGS E VKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL EAQNSA + SVA+S SHS
Subjt:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS

XP_022941487.1 uncharacterized protein LOC111446769 [Cucurbita moschata]1.5e-43100Show/hide
Query:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS
        MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS
Subjt:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS

XP_023525801.1 uncharacterized protein LOC111789310 [Cucurbita pepo subsp. pepo]4.7e-4297.89Show/hide
Query:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS
        MGSQE VKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAES SHS
Subjt:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS

XP_038899123.1 uncharacterized protein LOC120086511 [Benincasa hispida]1.4e-3891.58Show/hide
Query:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS
        MGSQE VKH+EECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSA E S+ +S SHS
Subjt:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS

TrEMBL top hitse value%identityAlignment
A0A0A0L1X1 Uncharacterized protein6.4e-3788.42Show/hide
Query:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS
        MGSQE VKH+E+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSA E  + +S+S S
Subjt:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS

A0A1S3B9M1 uncharacterized protein LOC103487570 isoform X23.1e-3990.53Show/hide
Query:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS
        MGSQE VKH+E+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAP+ S+ +S+SHS
Subjt:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS

A0A6J1C9Z5 uncharacterized protein LOC1110097372.2e-3791.58Show/hide
Query:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS
        MGS E VKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL EAQNSA + SVA+S SHS
Subjt:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS

A0A6J1FFR1 uncharacterized protein LOC1114435341.4e-3692.63Show/hide
Query:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS
        MGSQE VKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL EAQNSA E SV ES S S
Subjt:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS

A0A6J1FMK1 uncharacterized protein LOC1114467697.1e-44100Show/hide
Query:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS
        MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS
Subjt:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21930.1 unknown protein1.0e-3474.74Show/hide
Query:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS
        MGSQE VKHLEEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREHAE QMKLL+++QN+    +  E+   S
Subjt:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS

AT3G42150.1 unknown protein8.6e-3481.71Show/hide
Query:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNS
        MGSQ+ VKHLEEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREHAE Q KLL+++QN+
Subjt:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNS

AT3G42150.2 unknown protein8.6e-3481.71Show/hide
Query:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNS
        MGSQ+ VKHLEEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREHAE Q KLL+++QN+
Subjt:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNS

AT3G42150.3 unknown protein8.6e-3481.71Show/hide
Query:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNS
        MGSQ+ VKHLEEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREHAE Q KLL+++QN+
Subjt:  MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGCCAAGAAACCGTTAAACATCTCGAGGAGTGTTCAGTGTCAAATGCGTTGGGAACTTGGGTATTCTCAGTAGCAGGAGCGTTGCTAGCAATTCCAGTGGGAAT
AAAGAGGAAGTCTCTGGCACCCCTTGTGTTTTTTGGCACAACTGGTACAATGCTTGATATCATAATGGGAATTAGTGCCTGTGAGAGAGAACATGCTGAGCGTCAAATGA
AGCTATTAGAAGAAGCCCAAAACTCTGCACCCGAACCCTCTGTTGCTGAATCCCATTCCCATTCTTGA
mRNA sequenceShow/hide mRNA sequence
AATCTGTAAGGTTCTTGCCGGAGAAAAGCCACTCCACCGTTAACCAGTATTCCGCTAATAGTCAAGTTGAATTTCGCTGGTGTTTCTCACAAGTAATTGAGCTCATTCAA
TTGCGGGAGAGATATGGGAAGCCAAGAAACCGTTAAACATCTCGAGGAGTGTTCAGTGTCAAATGCGTTGGGAACTTGGGTATTCTCAGTAGCAGGAGCGTTGCTAGCAA
TTCCAGTGGGAATAAAGAGGAAGTCTCTGGCACCCCTTGTGTTTTTTGGCACAACTGGTACAATGCTTGATATCATAATGGGAATTAGTGCCTGTGAGAGAGAACATGCT
GAGCGTCAAATGAAGCTATTAGAAGAAGCCCAAAACTCTGCACCCGAACCCTCTGTTGCTGAATCCCATTCCCATTCTTGA
Protein sequenceShow/hide protein sequence
MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS