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CmoCh01G014690 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G014690
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUCR_hinge domain-containing protein
Genome locationCmo_Chr01:11418709..11424338
RNA-Seq ExpressionCmoCh01G014690
SyntenyCmoCh01G014690
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1993854.1 hypothetical protein ES319_D13G060900v1 [Gossypium barbadense]7.6e-1660.67Show/hide
Query:  VTAIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVM-NARVRTTTRDITMLDTAVWQPAM
        +TA + PISTE+K TP+KA IQATK NLSIFHI      ST+LITA+IM+   IAFGVYL + VM N+ V +T  DIT+LDT V  PAM
Subjt:  VTAIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVM-NARVRTTTRDITMLDTAVWQPAM

KAB2037112.1 hypothetical protein ES319_D03G051700v1 [Gossypium barbadense]6.8e-1763.95Show/hide
Query:  AIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVMNARVRTTTRDITMLDTAVWQPAM
        AIR  IS EKK TP+KA IQATKSNL IFHI   A  ST+LIT  IM+   IAFGVYL +GVM++ V +TT DIT+LDT V  PAM
Subjt:  AIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVMNARVRTTTRDITMLDTAVWQPAM

KAG4110531.1 hypothetical protein ERO13_D13G054866v2 [Gossypium hirsutum]2.6e-1660.67Show/hide
Query:  VTAIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVM-NARVRTTTRDITMLDTAVWQPAM
        +T  + PISTE+K TP+KA IQATK NLSIFHI      ST+LITA+IM+   IAFGVYL +GVM N+ V +T  DIT+LDT V  PAM
Subjt:  VTAIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVM-NARVRTTTRDITMLDTAVWQPAM

KJB79681.1 hypothetical protein B456_013G061800 [Gossypium raimondii]2.1e-1862.92Show/hide
Query:  VTAIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVM-NARVRTTTRDITMLDTAVWQPAM
        +TA + PISTE+K TP+KAPIQATKSNLSIFHI      ST+LITA+IM+   I FGVYL +GVM N+ V +T  DIT+LDT V+ PAM
Subjt:  VTAIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVM-NARVRTTTRDITMLDTAVWQPAM

TYI45789.1 hypothetical protein E1A91_D13G063200v1 [Gossypium mustelinum]8.9e-1761.8Show/hide
Query:  VTAIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVM-NARVRTTTRDITMLDTAVWQPAM
        +TA + PISTE+K TP+KA IQATK NLSIFHI      ST+LITA+IM+   IAFGVYL +GVM N+ V +T  DIT+LDT V  PAM
Subjt:  VTAIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVM-NARVRTTTRDITMLDTAVWQPAM

TrEMBL top hitse value%identityAlignment
A0A0D2V9V8 Uncharacterized protein1.0e-1862.92Show/hide
Query:  VTAIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVM-NARVRTTTRDITMLDTAVWQPAM
        +TA + PISTE+K TP+KAPIQATKSNLSIFHI      ST+LITA+IM+   I FGVYL +GVM N+ V +T  DIT+LDT V+ PAM
Subjt:  VTAIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVM-NARVRTTTRDITMLDTAVWQPAM

A0A445BAJ5 Uncharacterized protein1.0e-1346.61Show/hide
Query:  TAIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVMNARVRTTTRDITMLDTAVWQPAMGFTVNFANRRKHK
        TAI    S    MTP+KAP+QA KSNLSIFHI   A   T+ + A IMI +  AFGVYL +GV N     TT D TM D AV QPAM FT   A+R K  
Subjt:  TAIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVMNARVRTTTRDITMLDTAVWQPAMGFTVNFANRRKHK

Query:  KVAAITIVCQFHCHKVYK
           +  I  +    +  K
Subjt:  KVAAITIVCQFHCHKVYK

A0A5D2RYJ0 Uncharacterized protein4.3e-1761.8Show/hide
Query:  VTAIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVM-NARVRTTTRDITMLDTAVWQPAM
        +TA + PISTE+K TP+KA IQATK NLSIFHI      ST+LITA+IM+   IAFGVYL +GVM N+ V +T  DIT+LDT V  PAM
Subjt:  VTAIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVM-NARVRTTTRDITMLDTAVWQPAM

A0A5J5NIP6 Uncharacterized protein3.7e-1660.67Show/hide
Query:  VTAIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVM-NARVRTTTRDITMLDTAVWQPAM
        +TA + PISTE+K TP+KA IQATK NLSIFHI      ST+LITA+IM+   IAFGVYL + VM N+ V +T  DIT+LDT V  PAM
Subjt:  VTAIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVM-NARVRTTTRDITMLDTAVWQPAM

A0A5J5S0H0 Uncharacterized protein3.3e-1763.95Show/hide
Query:  AIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVMNARVRTTTRDITMLDTAVWQPAM
        AIR  IS EKK TP+KA IQATKSNL IFHI   A  ST+LIT  IM+   IAFGVYL +GVM++ V +TT DIT+LDT V  PAM
Subjt:  AIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVMNARVRTTTRDITMLDTAVWQPAM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCAGCTTGTTACCGCAATTAGAAGCCCCATCTCTACAGAGAAAAAGATGACACCGAGGAAGGCTCCCATACAAGCAACAAAATCAAATTTATCAATCTTCCATAT
CAACTTCGCTGCATGCAAGTCAACCAGGTTGATCACAGCATTTATAATGATAGCAGATAGGATTGCATTTGGAGTATATTTGAAAAGTGGAGTGATGAATGCCAGAGTTA
GGACTACTACAAGGGACATCACAATGTTGGATACTGCAGTTTGGCAGCCAGCCATGGGCTTTACAGTGAATTTTGCAAATAGAAGAAAGCATAAGAAGGTTGCAGCAATC
ACTATTGTCTGCCAGTTCCACTGTCATAAAGTATACAAACTATCAGTAAGAACGAAGCCGATAAATTTTCGGGGAACTCACTCCGTGTTGCATCGTGCCGAATACCGACT
GCATAACCGAGATAATATCCGTTTTCTTTGTGAAATTCTTTATGCCAAGAAAGCCTTTGAGTTGTTGGAGAGCAATGGTGATGGCAGCTCCCCCCATGAAGCCAACAATA
GCAGCATGGGACAAGAAAGAGCCTTAAAGAGTTTGGTAGGATTGAAAGACTCCACCATGATCATGTCAGTTTTGATTGAGATATAA
mRNA sequenceShow/hide mRNA sequence
TGTGCGTGTGCGTGTGCGTGTGCGTGTGCGTGTGCGTGTGGGTGTGCGTGGGGTTGGGGAGCCCCTCGATTCCCCTCATCCAATTTTCAACCCCTTTTTCCATTCCCCAC
TTCACACCCCATCATTTCTCCTTTGAATTCAATCCCCAATCCTTACTCTGTTGCGCTTTTTTTGCATTCCATTTCTTAATCATCACTTATGAGCAAGTGGGTATTCATTA
AAATCTCCAAGCAACCCCTATTGGTTGCCTCTGCCCTGTGTTGCTTCCTTCAAGAACTTTGATGAACTTTTCTAGGTCAAATCCAAAAAAACAAGTTCAAACACTCTTTG
ATGTGTTCTGTGAATTCCATTTTCTATTTGCTGTTACATATTTCTGTGGAAAGAACAAGATCAATCCAATTTTTATCTCTGATTTGTTCTTTCTTTTTTGATTTAAGAAC
ATGATACAATGCCACTTTCCCATTTTACACCTACTTTCACTCCCATAATCATCCCACTACTGATGAACACTGTGTGCGTTGAGCTATATGTCCCAGCTTGTTACCGCAAT
TAGAAGCCCCATCTCTACAGAGAAAAAGATGACACCGAGGAAGGCTCCCATACAAGCAACAAAATCAAATTTATCAATCTTCCATATCAACTTCGCTGCATGCAAGTCAA
CCAGGTTGATCACAGCATTTATAATGATAGCAGATAGGATTGCATTTGGAGTATATTTGAAAAGTGGAGTGATGAATGCCAGAGTTAGGACTACTACAAGGGACATCACA
ATGTTGGATACTGCAGTTTGGCAGCCAGCCATGGGCTTTACAGTGAATTTTGCAAATAGAAGAAAGCATAAGAAGGTTGCAGCAATCACTATTGTCTGCCAGTTCCACTG
TCATAAAGTATACAAACTATCAGTAAGAACGAAGCCGATAAATTTTCGGGGAACTCACTCCGTGTTGCATCGTGCCGAATACCGACTGCATAACCGAGATAATATCCGTT
TTCTTTGTGAAATTCTTTATGCCAAGAAAGCCTTTGAGTTGTTGGAGAGCAATGGTGATGGCAGCTCCCCCCATGAAGCCAACAATAGCAGCATGGGACAAGAAAGAGCC
TTAAAGAGTTTGGTAGGATTGAAAGACTCCACCATGATCATGTCAGTTTTGATTGAGATATAA
Protein sequenceShow/hide protein sequence
MSQLVTAIRSPISTEKKMTPRKAPIQATKSNLSIFHINFAACKSTRLITAFIMIADRIAFGVYLKSGVMNARVRTTTRDITMLDTAVWQPAMGFTVNFANRRKHKKVAAI
TIVCQFHCHKVYKLSVRTKPINFRGTHSVLHRAEYRLHNRDNIRFLCEILYAKKAFELLESNGDGSSPHEANNSSMGQERALKSLVGLKDSTMIMSVLIEI