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CmoCh01G014840 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G014840
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr01:11510859..11512094
RNA-Seq ExpressionCmoCh01G014840
SyntenyCmoCh01G014840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ16218.1 hypothetical protein Acr_25g0006270 [Actinidia rufa]5.9e-0739.34Show/hide
Query:  MVTTPLLLPPYPHRRILRPTQHQPLHHRQTQHPKSMPLQEPTMVISVRNPLLFPKVDCPIRGTRVEDRLAVRVGAENDSIHRGSLELECHCECVGVLP--
        M TTP L PP P+R ILRP +HQ L   QTQH +S+PLQEP +V      LL P+VD P                              H E V VLP  
Subjt:  MVTTPLLLPPYPHRRILRPTQHQPLHHRQTQHPKSMPLQEPTMVISVRNPLLFPKVDCPIRGTRVEDRLAVRVGAENDSIHRGSLELECHCECVGVLP--

Query:  TSPDFDSSIRGTGEETAIILVD
        + PDFD  I    E   ++LVD
Subjt:  TSPDFDSSIRGTGEETAIILVD
TVU04011.1 hypothetical protein EJB05_50427, partial [Eragrostis curvula]6.9e-0837.9Show/hide
Query:  LLFPKVDCPIRGTRVEDRLAVRVG-----AENDSIHRG-SLELECHCECV--GVLPTSPDFDSSIRGTGEETAIILVDCYGVDFVLMGEEGVNAFSVGDP
        L+   VD  + G  VE+ L++  G     AE  S+ RG  +  E   E V    +  +P  D ++ G GE+  + LVD +GVD  ++ +EGV+A +VG+ 
Subjt:  LLFPKVDCPIRGTRVEDRLAVRVG-----AENDSIHRG-SLELECHCECV--GVLPTSPDFDSSIRGTGEETAIILVDCYGVDFVLMGEEGVNAFSVGDP

Query:  PGFDGFVVGGGVEEVLGVVISHAG
        PG DG VVGG VEE    V   AG
Subjt:  PGFDGFVVGGGVEEVLGVVISHAG
TrEMBL top hitse value%identityAlignment
A0A5J9SZQ7 Uncharacterized protein (Fragment)3.4e-0837.9Show/hide
Query:  LLFPKVDCPIRGTRVEDRLAVRVG-----AENDSIHRG-SLELECHCECV--GVLPTSPDFDSSIRGTGEETAIILVDCYGVDFVLMGEEGVNAFSVGDP
        L+   VD  + G  VE+ L++  G     AE  S+ RG  +  E   E V    +  +P  D ++ G GE+  + LVD +GVD  ++ +EGV+A +VG+ 
Subjt:  LLFPKVDCPIRGTRVEDRLAVRVG-----AENDSIHRG-SLELECHCECV--GVLPTSPDFDSSIRGTGEETAIILVDCYGVDFVLMGEEGVNAFSVGDP

Query:  PGFDGFVVGGGVEEVLGVVISHAG
        PG DG VVGG VEE    V   AG
Subjt:  PGFDGFVVGGGVEEVLGVVISHAG
A0A7J0GZQ8 Uncharacterized protein2.8e-0739.34Show/hide
Query:  MVTTPLLLPPYPHRRILRPTQHQPLHHRQTQHPKSMPLQEPTMVISVRNPLLFPKVDCPIRGTRVEDRLAVRVGAENDSIHRGSLELECHCECVGVLP--
        M TTP L PP P+R ILRP +HQ L   QTQH +S+PLQEP +V      LL P+VD P                              H E V VLP  
Subjt:  MVTTPLLLPPYPHRRILRPTQHQPLHHRQTQHPKSMPLQEPTMVISVRNPLLFPKVDCPIRGTRVEDRLAVRVGAENDSIHRGSLELECHCECVGVLP--

Query:  TSPDFDSSIRGTGEETAIILVD
        + PDFD  I    E   ++LVD
Subjt:  TSPDFDSSIRGTGEETAIILVD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGATTATATTGTTCTAATAGTTAGAAGCTTGAAGCTTCTTCTCAACCCAAGAAGGAGACAGGACAGGACTCATCTCATAAAGCTTGTTCATCTTCAAATCCCCAC
CATTGTTCTCTTCTTCAGCCAACATTACCTTCACTCTCCAGACCTTAAACGACTGATCCAAACTCCCACTATAAACCAAGAAACTCATATCCATGCACCTGACCGGCCCT
CTATGCCCATCAAGCACCGCCAAGCACTCATGGTAACAACCCCCCTCCTCCTTCCTCCATATCCTCACCGTCGTATCCTCCGACCCACTCAACACCAGCCTCTCCACCAC
CGCCAAACACAGCACCCCAAATCGATGCCCTTGCAAGAACCCACCATGGTTATATCTGTAAGAAACCCTCTCCTTTTCCCAAAAGTTGATTGTCCCATCAGAGGAACCAG
AGTAGAGGATCGTCTCGCCGTCAGAGTGGGAGCTGAGAACGACAGCATTCACAGGGGAAGTTTGGAACTTGAGTGTCATTGTGAGTGTGTGGGAGTTCTCCCGACATCGC
CAGATTTTGACAGTTCCATCAGAGGAACAGGTGAAGAGACAGCCATCATTTTGGTTGACTGTTATGGAGTTGACTTTGTCCTCATGGGCGAGGAAGGAGTCAACGCATTT
TCGGTCGGAGATCCGCCAGGCTTTGACGGTTTTGTCGTGGGAGGCGGTGTAGAGGAGGTCCTGGGCGTGGTAATAAGCCATGCAGGATATGCTACTAATGGCATGCTTGA
AAGGAAATATACCATAGGCAGCAATGGCCCAGACGCCGCCCGCAGCAGCCTTGAGGTACCCACGGTCCATGCAATCGGGCTGCTTCCATGCACGAACGCGGCAGCTATCA
GAGCCAGTAAACACCACGCCATTCGAAATAGCGATCGAGTATATGTTCCCTTCTCCACGATGAAGCGACGCTATGCAGTGATGAAGCAAAAGTGGCGAAGGGGTCCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGATTATATTGTTCTAATAGTTAGAAGCTTGAAGCTTCTTCTCAACCCAAGAAGGAGACAGGACAGGACTCATCTCATAAAGCTTGTTCATCTTCAAATCCCCAC
CATTGTTCTCTTCTTCAGCCAACATTACCTTCACTCTCCAGACCTTAAACGACTGATCCAAACTCCCACTATAAACCAAGAAACTCATATCCATGCACCTGACCGGCCCT
CTATGCCCATCAAGCACCGCCAAGCACTCATGGTAACAACCCCCCTCCTCCTTCCTCCATATCCTCACCGTCGTATCCTCCGACCCACTCAACACCAGCCTCTCCACCAC
CGCCAAACACAGCACCCCAAATCGATGCCCTTGCAAGAACCCACCATGGTTATATCTGTAAGAAACCCTCTCCTTTTCCCAAAAGTTGATTGTCCCATCAGAGGAACCAG
AGTAGAGGATCGTCTCGCCGTCAGAGTGGGAGCTGAGAACGACAGCATTCACAGGGGAAGTTTGGAACTTGAGTGTCATTGTGAGTGTGTGGGAGTTCTCCCGACATCGC
CAGATTTTGACAGTTCCATCAGAGGAACAGGTGAAGAGACAGCCATCATTTTGGTTGACTGTTATGGAGTTGACTTTGTCCTCATGGGCGAGGAAGGAGTCAACGCATTT
TCGGTCGGAGATCCGCCAGGCTTTGACGGTTTTGTCGTGGGAGGCGGTGTAGAGGAGGTCCTGGGCGTGGTAATAAGCCATGCAGGATATGCTACTAATGGCATGCTTGA
AAGGAAATATACCATAGGCAGCAATGGCCCAGACGCCGCCCGCAGCAGCCTTGAGGTACCCACGGTCCATGCAATCGGGCTGCTTCCATGCACGAACGCGGCAGCTATCA
GAGCCAGTAAACACCACGCCATTCGAAATAGCGATCGAGTATATGTTCCCTTCTCCACGATGAAGCGACGCTATGCAGTGATGAAGCAAAAGTGGCGAAGGGGTCCGTAA
Protein sequenceShow/hide protein sequence
MKDYIVLIVRSLKLLLNPRRRQDRTHLIKLVHLQIPTIVLFFSQHYLHSPDLKRLIQTPTINQETHIHAPDRPSMPIKHRQALMVTTPLLLPPYPHRRILRPTQHQPLHH
RQTQHPKSMPLQEPTMVISVRNPLLFPKVDCPIRGTRVEDRLAVRVGAENDSIHRGSLELECHCECVGVLPTSPDFDSSIRGTGEETAIILVDCYGVDFVLMGEEGVNAF
SVGDPPGFDGFVVGGGVEEVLGVVISHAGYATNGMLERKYTIGSNGPDAARSSLEVPTVHAIGLLPCTNAAAIRASKHHAIRNSDRVYVPFSTMKRRYAVMKQKWRRGP