; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G014950 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G014950
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1
Genome locationCmo_Chr01:11556825..11563238
RNA-Seq ExpressionCmoCh01G014950
SyntenyCmoCh01G014950
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0003682 - chromatin binding (molecular function)
InterPro domainsIPR032001 - SAWADEE domain
IPR039276 - Protein SAWADEE HOMEODOMAIN HOMOLOG 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608096.1 Protein SAWADEE HOMEODOMAIN-like 1, partial [Cucurbita argyrosperma subsp. sororia]3.4e-13699.59Show/hide
Query:  MERLRRRDRQMFSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR
        MERLRRRDRQMFSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIP+ACPSNKTQESSQR
Subjt:  MERLRRRDRQMFSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR

Query:  PEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDA
        PEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDA
Subjt:  PEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDA

Query:  HIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF
        HIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF
Subjt:  HIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF

XP_022940593.1 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 [Cucurbita moschata]1.2e-136100Show/hide
Query:  MERLRRRDRQMFSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR
        MERLRRRDRQMFSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR
Subjt:  MERLRRRDRQMFSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR

Query:  PEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDA
        PEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDA
Subjt:  PEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDA

Query:  HIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF
        HIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF
Subjt:  HIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF

XP_022940594.1 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 [Cucurbita moschata]3.0e-124100Show/hide
Query:  MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDG
        MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDG
Subjt:  MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDG

Query:  AWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVR
        AWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVR
Subjt:  AWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVR

Query:  YEHDSTEEKVRLRRLCHRPAHRF
        YEHDSTEEKVRLRRLCHRPAHRF
Subjt:  YEHDSTEEKVRLRRLCHRPAHRF

XP_022981043.1 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 [Cucurbita maxima]1.0e-13296.73Show/hide
Query:  MERLRRRDRQMFSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR
        MER RRRDRQMFSGFTKGEIEKMEKLL+ESGLQLLNREFC+KVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR
Subjt:  MERLRRRDRQMFSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR

Query:  PEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDA
        PEG+KSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVP+EHSECQKLKVGD VLCFQERRDQAIYYDA
Subjt:  PEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDA

Query:  HIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF
        HIVEVQRRMHDIRGCRCLFLVRY HDSTEEKVRLRRLCHRPAH+F
Subjt:  HIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF

XP_023523535.1 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 [Cucurbita pepo subsp. pepo]4.9e-13599.18Show/hide
Query:  MERLRRRDRQMFSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR
        MERLRRRDRQMFSGFTKGEIEKMEKLLEES LQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR
Subjt:  MERLRRRDRQMFSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR

Query:  PEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDA
        PEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFL SGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDA
Subjt:  PEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDA

Query:  HIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF
        HIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF
Subjt:  HIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF

TrEMBL top hitse value%identityAlignment
A0A6J1F8P9 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X41.3e-12288.98Show/hide
Query:  MERLRRRDRQMFSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR
        MERLR RDRQMFSGFTKGEI KMEKL+EESG QLL+R+FCQKVT+ FNRSSGRAGKPVIKWMEVY+W +SRLQDFPK EKRMSEIPKACPSNKTQESSQ 
Subjt:  MERLRRRDRQMFSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR

Query:  PEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDA
        PEG+K PDLSELEFEARSSKDGAWYDVAMFLTHRFL SGEAE RVRFVGFGAEEDEWVNIKQ+VR RSVP+EHSECQK+K GD+VLCFQERRDQAIYYDA
Subjt:  PEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDA

Query:  HIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF
        HIVEVQRRMHDIRGCRCLFL+RY+HDSTEEKVRLRRLC RPAH+F
Subjt:  HIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF

A0A6J1FKP9 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X21.4e-124100Show/hide
Query:  MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDG
        MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDG
Subjt:  MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDG

Query:  AWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVR
        AWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVR
Subjt:  AWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVR

Query:  YEHDSTEEKVRLRRLCHRPAHRF
        YEHDSTEEKVRLRRLCHRPAHRF
Subjt:  YEHDSTEEKVRLRRLCHRPAHRF

A0A6J1FPQ9 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X15.6e-137100Show/hide
Query:  MERLRRRDRQMFSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR
        MERLRRRDRQMFSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR
Subjt:  MERLRRRDRQMFSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR

Query:  PEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDA
        PEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDA
Subjt:  PEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDA

Query:  HIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF
        HIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF
Subjt:  HIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF

A0A6J1IMF0 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like6.0e-12389.39Show/hide
Query:  MERLRRRDRQMFSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR
        MERLR RDRQMFSGFTKGEI KMEKL+EESG QLL+R+FCQKVT+ FNRSSGRAGKPVIKWMEVY+W +SRLQDFPK EKRMSEIPKACPSNKTQESSQ 
Subjt:  MERLRRRDRQMFSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR

Query:  PEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDA
        PEG+K PDLSELEFEARSSKDGAWYDVAMFLTHRFL SGEAE RVRFVGFGAEEDEWVNIKQAVR RSVP+EHSECQK+K GD+VLCFQERRDQAIYYDA
Subjt:  PEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDA

Query:  HIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF
        HIVEVQRRMHDIRGCRCLFL+RY+HDSTEEKVRLRRLC RPAH+F
Subjt:  HIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF

A0A6J1J117 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X14.9e-13396.73Show/hide
Query:  MERLRRRDRQMFSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR
        MER RRRDRQMFSGFTKGEIEKMEKLL+ESGLQLLNREFC+KVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR
Subjt:  MERLRRRDRQMFSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRLQDFPKNEKRMSEIPKACPSNKTQESSQR

Query:  PEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDA
        PEG+KSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVP+EHSECQKLKVGD VLCFQERRDQAIYYDA
Subjt:  PEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDA

Query:  HIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF
        HIVEVQRRMHDIRGCRCLFLVRY HDSTEEKVRLRRLCHRPAH+F
Subjt:  HIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF

SwissProt top hitse value%identityAlignment
Q8RWJ7 Protein SAWADEE HOMEODOMAIN HOMOLOG 25.6e-4940.93Show/hide
Query:  FTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSR----------------LQDFPK----NEKRMSEIPKACP----
        F   E+ +ME +L +    +  R   + +   F+ S  R GK V+++ +++NW Q+R                +   P+    N+ R    P + P    
Subjt:  FTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSR----------------LQDFPK----NEKRMSEIPKACP----

Query:  -SNKTQESSQRPEGEKSP-------DLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVG
         +      +  P G   P       D S LEFEA+S++DGAWYDV  FL HR L  G+ E +VRF GF  EEDEW+N+K+ VR RS+P E SEC  +  G
Subjt:  -SNKTQESSQRPEGEKSP-------DLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVG

Query:  DIVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRP
        D+VLCFQE +DQA+Y+DA +++ QRR HD+RGCRC FLVRY HD +EE V LR++C RP
Subjt:  DIVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRP

Q9XI47 Protein SAWADEE HOMEODOMAIN HOMOLOG 15.7e-5446.56Show/hide
Query:  FSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRL--QDFPKNEKRMS--------EIPKACPSNKTQES----
        F+ FT  EI  ME L +E G Q L+++FCQ V   F+ S  R GK  I W +V  W Q +L  Q  PK++   S          P +  SN +  +    
Subjt:  FSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRL--QDFPKNEKRMS--------EIPKACPSNKTQES----

Query:  ---SQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQ
            Q  +G K+ DL++L FEA+S++D AWYDV+ FLT+R LR+GE E RVRF GF    DEWVN+K +VR RS+P+E SEC ++ VGD++LCFQER DQ
Subjt:  ---SQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQ

Query:  AIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRP
        A+Y D H++ ++R +HD   C C+FLVRYE D+TEE + L R+C RP
Subjt:  AIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRP

Arabidopsis top hitse value%identityAlignment
AT1G15215.1 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors5.7e-4946.09Show/hide
Query:  MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRL--QDFPKNEKRMS--------EIPKACPSNKTQES-------SQRPEGEK
        ME L +E G Q L+++FCQ V   F+ S  R GK  I W +V  W Q +L  Q  PK++   S          P +  SN +  +        Q  +G K
Subjt:  MEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRL--QDFPKNEKRMS--------EIPKACPSNKTQES-------SQRPEGEK

Query:  SPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHIVEV
        + DL++L FEA+S++D AWYDV+ FLT+R LR+GE E RVRF GF    DEWVN+K +VR RS+P+E SEC ++ VGD++LCFQER DQA+Y D H++ +
Subjt:  SPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQAIYYDAHIVEV

Query:  QRRMHDIRGCRCLFLVRYEHDSTEEKVRLR
        +R +HD   C C+FLVRYE D+TE   R R
Subjt:  QRRMHDIRGCRCLFLVRYEHDSTEEKVRLR

AT1G15215.2 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors4.1e-5546.56Show/hide
Query:  FSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRL--QDFPKNEKRMS--------EIPKACPSNKTQES----
        F+ FT  EI  ME L +E G Q L+++FCQ V   F+ S  R GK  I W +V  W Q +L  Q  PK++   S          P +  SN +  +    
Subjt:  FSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRL--QDFPKNEKRMS--------EIPKACPSNKTQES----

Query:  ---SQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQ
            Q  +G K+ DL++L FEA+S++D AWYDV+ FLT+R LR+GE E RVRF GF    DEWVN+K +VR RS+P+E SEC ++ VGD++LCFQER DQ
Subjt:  ---SQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQ

Query:  AIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRP
        A+Y D H++ ++R +HD   C C+FLVRYE D+TEE + L R+C RP
Subjt:  AIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRP

AT1G15215.3 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors2.7e-5146.06Show/hide
Query:  FSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRL--QDFPKNEKRMS--------EIPKACPSNKTQES----
        F+ FT  EI  ME L +E G Q L+++FCQ V   F+ S  R GK  I W +V  W Q +L  Q  PK++   S          P +  SN +  +    
Subjt:  FSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSRL--QDFPKNEKRMS--------EIPKACPSNKTQES----

Query:  ---SQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQ
            Q  +G K+ DL++L FEA+S++D AWYDV+ FLT+R LR+GE E RVRF GF    DEWVN+K +VR RS+P+E SEC ++ VGD++LCFQER DQ
Subjt:  ---SQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDIVLCFQERRDQ

Query:  AIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLR
        A+Y D H++ ++R +HD   C C+FLVRYE D+TE   R R
Subjt:  AIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLR

AT3G18380.1 sequence-specific DNA binding transcription factors;sequence-specific DNA binding3.9e-5040.93Show/hide
Query:  FTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSR----------------LQDFPK----NEKRMSEIPKACP----
        F   E+ +ME +L +    +  R   + +   F+ S  R GK V+++ +++NW Q+R                +   P+    N+ R    P + P    
Subjt:  FTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSR----------------LQDFPK----NEKRMSEIPKACP----

Query:  -SNKTQESSQRPEGEKSP-------DLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVG
         +      +  P G   P       D S LEFEA+S++DGAWYDV  FL HR L  G+ E +VRF GF  EEDEW+N+K+ VR RS+P E SEC  +  G
Subjt:  -SNKTQESSQRPEGEKSP-------DLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVG

Query:  DIVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRP
        D+VLCFQE +DQA+Y+DA +++ QRR HD+RGCRC FLVRY HD +EE V LR++C RP
Subjt:  DIVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRP

AT3G18380.3 sequence-specific DNA binding transcription factors;sequence-specific DNA binding5.7e-4940.7Show/hide
Query:  FTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSR----------------LQDFPK----NEKRMSEIPKACPSNKT
        F   E+ +ME +L +    +  R   + +   F+ S  R GK V+++ +++NW Q+R                +   P+    N+ R    P + P   T
Subjt:  FTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSR----------------LQDFPK----NEKRMSEIPKACPSNKT

Query:  QESSQRPEGEKSP----------DLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDI
          +   P    +P          D S LEFEA+S++DGAWYDV  FL HR L  G+ E +VRF GF  EEDEW+N+K+ VR RS+P E SEC  +  GD+
Subjt:  QESSQRPEGEKSP----------DLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKVGDI

Query:  VLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEEK-VRLRRLCHRP
        VLCFQE +DQA+Y+DA +++ QRR HD+RGCRC FLVRY HD +E++ V LR++C RP
Subjt:  VLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEEK-VRLRRLCHRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCCGGTACTGGTAATTTTATACTCATGTTCGCCCGGTTTGGGTATTTCTGCTCGACGAGGCGTGGAACTGGGAATCTTCTCTCCAAAAATCGAGTAGCAGCAAC
AGGAAGAATGGAGCGTCTCCGCCGGAGAGACAGACAGATGTTTTCTGGGTTTACGAAGGGCGAGATAGAGAAAATGGAGAAATTGCTAGAGGAATCAGGATTACAGTTGC
TTAATAGAGAATTTTGTCAAAAAGTTACCCAAGGTTTCAATCGGTCTTCTGGTCGTGCTGGGAAGCCTGTAATAAAGTGGATGGAGGTATACAATTGGCTCCAAAGTCGA
CTGCAAGACTTCCCGAAAAATGAAAAGAGGATGTCTGAAATTCCCAAAGCTTGCCCTTCAAATAAGACTCAGGAAAGTTCTCAACGCCCCGAAGGTGAAAAGAGCCCAGA
TTTATCAGAATTGGAATTTGAAGCAAGGTCATCAAAAGATGGTGCATGGTATGATGTTGCTATGTTCCTTACGCATAGATTTCTTAGGTCAGGCGAAGCTGAAGCGCGAG
TCAGATTTGTCGGATTCGGAGCCGAGGAAGACGAATGGGTCAACATAAAACAGGCAGTACGAGTACGCTCTGTCCCTATAGAACATTCAGAGTGTCAAAAGTTGAAGGTT
GGGGACATTGTACTCTGCTTCCAGGAGAGGAGAGATCAGGCAATCTACTATGATGCACATATTGTGGAAGTCCAGAGGAGAATGCATGACATTAGGGGCTGCAGGTGTCT
TTTCCTGGTTCGTTACGAACACGATAGCACCGAGGAAAAAGTTCGTTTGAGAAGATTATGTCACAGACCGGCACATCGATTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCCGGTACTGGTAATTTTATACTCATGTTCGCCCGGTTTGGGTATTTCTGCTCGACGAGGCGTGGAACTGGGAATCTTCTCTCCAAAAATCGAGTAGCAGCAAC
AGGAAGAATGGAGCGTCTCCGCCGGAGAGACAGACAGATGTTTTCTGGGTTTACGAAGGGCGAGATAGAGAAAATGGAGAAATTGCTAGAGGAATCAGGATTACAGTTGC
TTAATAGAGAATTTTGTCAAAAAGTTACCCAAGGTTTCAATCGGTCTTCTGGTCGTGCTGGGAAGCCTGTAATAAAGTGGATGGAGGTATACAATTGGCTCCAAAGTCGA
CTGCAAGACTTCCCGAAAAATGAAAAGAGGATGTCTGAAATTCCCAAAGCTTGCCCTTCAAATAAGACTCAGGAAAGTTCTCAACGCCCCGAAGGTGAAAAGAGCCCAGA
TTTATCAGAATTGGAATTTGAAGCAAGGTCATCAAAAGATGGTGCATGGTATGATGTTGCTATGTTCCTTACGCATAGATTTCTTAGGTCAGGCGAAGCTGAAGCGCGAG
TCAGATTTGTCGGATTCGGAGCCGAGGAAGACGAATGGGTCAACATAAAACAGGCAGTACGAGTACGCTCTGTCCCTATAGAACATTCAGAGTGTCAAAAGTTGAAGGTT
GGGGACATTGTACTCTGCTTCCAGGAGAGGAGAGATCAGGCAATCTACTATGATGCACATATTGTGGAAGTCCAGAGGAGAATGCATGACATTAGGGGCTGCAGGTGTCT
TTTCCTGGTTCGTTACGAACACGATAGCACCGAGGAAAAAGTTCGTTTGAGAAGATTATGTCACAGACCGGCACATCGATTCTAAGCTGGAGATATGAATGGTTTGCCAC
AGAAACTACAATGGGTAATGCTAATTTTGTATGTTCTTTCATAAAGGTGAGGGCATGTTGTGGGTAAAATTTCATAATAGAAGTGGTTTGATTGTTTTCACCTTATTGTT
TGTGTATCCATGGCATCTGTAGTTTCTCCCAAAAGCCGTGGGAACAAGCATGGGAGACGCACATGTAATTGTTGCATATTCTATGCCTATCTATGGCAAATTGGGCAAGA
CGAGTTCGAACTTTTAGTGGGTTTTAATATCTCTCTCTGCCCATTGCTTGCAAATCTTTAGCCATTTTAAACAGGTCTGTAACAGAGAGAGAGTCTTGAGATCCACTGAG
ACAACCATAGCCAAAGCTGTGGACTTTCAGAGGGAATTTTGGGACACCTTCAACACTACCACATGGTTCGACCCGAAACTCTCCTTAACCAATTCTATGAGAAAGGTTGC
TAGAAAAAGTTTCGAGAAATGAAATTCGAGCAGTTTCGGCTCTTCGATTAAGCACTCTTGAAGCATTAGTTGTGATCCCATAATTAGTCTCGACTTTCTCTTGAATCTCT
CAAGATTGTTTGCTTTATAATTGTTGCTAAAACTGGTTTTGTCGTGTAAAAACTATATTTAATAGGAGCGTTGTTGCTAAAACTGGTCAGATTGTAACATTTGTTTTAGA
TCCAACCCAACTTGAACCAACATAATCG
Protein sequenceShow/hide protein sequence
MRSGTGNFILMFARFGYFCSTRRGTGNLLSKNRVAATGRMERLRRRDRQMFSGFTKGEIEKMEKLLEESGLQLLNREFCQKVTQGFNRSSGRAGKPVIKWMEVYNWLQSR
LQDFPKNEKRMSEIPKACPSNKTQESSQRPEGEKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLRSGEAEARVRFVGFGAEEDEWVNIKQAVRVRSVPIEHSECQKLKV
GDIVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYEHDSTEEKVRLRRLCHRPAHRF