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CmoCh01G015140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G015140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionphosphoglycerate mutase-like protein
Genome locationCmo_Chr01:11701618..11703724
RNA-Seq ExpressionCmoCh01G015140
SyntenyCmoCh01G015140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038646.1 phosphoglycerate mutase-like protein 1 [Cucumis melo var. makuwa]4.2e-1385.71Show/hide
Query:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKY
        +WLWTRK+KEIAI THS FLFEL+K FGNDCHPSIKSEICKY
Subjt:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKY

KAA0038646.1 phosphoglycerate mutase-like protein 1 [Cucumis melo var. makuwa]3.2e-0569.05Show/hide
Query:  VRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQ-ENIKK
        VR+  G HN AMEKD SLLQS DYFDAQL  LGWQQ +N++K
Subjt:  VRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQ-ENIKK

KAA0038646.1 phosphoglycerate mutase-like protein 1 [Cucumis melo var. makuwa]4.2e-1385.71Show/hide
Query:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKY
        +WLWTRK+KEIAI THS FLFEL+K FGNDCHPSIKSEICKY
Subjt:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKY

KAG6608117.1 Phosphoglycerate mutase-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2058.56Show/hide
Query:  MTMAVLFVGEMVLSLIRSFVRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQENIKKTKYANSWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSI
        MTMAVLFVGEMVLSLIRSF+  +      A      +    D    ++ +L                LWTRK+KEIAIATHSVFLFELLKGFGNDCHPSI
Subjt:  MTMAVLFVGEMVLSLIRSFVRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQENIKKTKYANSWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSI

Query:  KSEICKYMKGS
        KSEICKYMKGS
Subjt:  KSEICKYMKGS

KHG16416.1 Drebrin [Gossypium arboreum]2.5e-1334.64Show/hide
Query:  VRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQE-----NIKKTKYAN-------------------------------------------------
        VR+  GVHN A E D +   S +YFDA L  LGWQQ       +     AN                                                 
Subjt:  VRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQE-----NIKKTKYAN-------------------------------------------------

Query:  ------SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKYMKGSD
              SWLWTRK+KEIAI THS FL+  L  FG+DCHPS+K EICK+ K  +
Subjt:  ------SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKYMKGSD

XP_008466126.1 PREDICTED: phosphoglycerate mutase-like protein 1 [Cucumis melo]3.2e-0569.05Show/hide
Query:  VRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQ-ENIKK
        VR+  G HN AMEKD SLLQS DYFDAQL  LGWQQ +N++K
Subjt:  VRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQ-ENIKK

XP_038897794.1 phosphoglycerate mutase-like protein 1 isoform X2 [Benincasa hispida]9.1e-1635.11Show/hide
Query:  VRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQ-ENIKK----------------------------------------------------------
        VR+  G HN A EKD SLLQS DYFDAQL  LGWQQ +N++K                                                          
Subjt:  VRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQ-ENIKK----------------------------------------------------------

Query:  -----------------------------------------TKYANSWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKY
                                                  K+ N WLWTRK+KEIAI THS FLFELLK FGNDCHPSIK+EICKY
Subjt:  -----------------------------------------TKYANSWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKY

TrEMBL top hitse value%identityAlignment
A0A0B0NZA2 Drebrin1.2e-1334.64Show/hide
Query:  VRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQE-----NIKKTKYAN-------------------------------------------------
        VR+  GVHN A E D +   S +YFDA L  LGWQQ       +     AN                                                 
Subjt:  VRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQE-----NIKKTKYAN-------------------------------------------------

Query:  ------SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKYMKGSD
              SWLWTRK+KEIAI THS FL+  L  FG+DCHPS+K EICK+ K  +
Subjt:  ------SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKYMKGSD

A0A1S3CQI6 phosphoglycerate mutase-like protein 12.0e-1385.71Show/hide
Query:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKY
        +WLWTRK+KEIAI THS FLFEL+K FGNDCHPSIKSEICKY
Subjt:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKY

A0A1S3CQI6 phosphoglycerate mutase-like protein 11.6e-0569.05Show/hide
Query:  VRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQ-ENIKK
        VR+  G HN AMEKD SLLQS DYFDAQL  LGWQQ +N++K
Subjt:  VRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQ-ENIKK

A0A1S3CQI6 phosphoglycerate mutase-like protein 12.0e-1385.71Show/hide
Query:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKY
        +WLWTRK+KEIAI THS FLFEL+K FGNDCHPSIKSEICKY
Subjt:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKY

A0A5A7T8W1 Phosphoglycerate mutase-like protein 11.6e-0569.05Show/hide
Query:  VRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQ-ENIKK
        VR+  G HN AMEKD SLLQS DYFDAQL  LGWQQ +N++K
Subjt:  VRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQ-ENIKK

A0A5A7T8W1 Phosphoglycerate mutase-like protein 12.7e-1377.55Show/hide
Query:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKYMKGSDPS
        +WLWT K+KEIAI THS FLFELLK FGNDCHPS++SEI KYM GSD S
Subjt:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKYMKGSDPS

A0A6J1DKQ7 phosphoglycerate mutase-like protein 1 isoform X21.9e-0359.52Show/hide
Query:  VRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQ-ENIKK
        VR+  G+HN A E+D S L S DYFDA+L TLGWQQ +N++K
Subjt:  VRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQ-ENIKK

A0A6J1DKQ7 phosphoglycerate mutase-like protein 1 isoform X21.0e-1230.66Show/hide
Query:  VRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQ-ENIKKTKY-------------------------------------------AN----------
        VR+  G HN AMEKD SLLQS DYFDAQL  LGWQQ +N++K  +                                           AN          
Subjt:  VRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQ-ENIKKTKY-------------------------------------------AN----------

Query:  ----------------------------------------------------------------------SWLWTRKQKEIAIATHSVFLFELLKGFGND
                                                                              +WLWTRK+KEIAI THS FLFEL+K FGND
Subjt:  ----------------------------------------------------------------------SWLWTRKQKEIAIATHSVFLFELLKGFGND

Query:  CHPSIKSEICKY
        CHPSIKSEIC +
Subjt:  CHPSIKSEICKY

SwissProt top hitse value%identityAlignment
F4IBB2 Phosphoglycerate mutase-like protein 23.9e-0963.41Show/hide
Query:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICK
        +WL TRK+KEIA+ THS FL++ L  FGNDC PS+K+EI K
Subjt:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICK

Q8GY96 Phosphoglycerate mutase-like protein1.8e-0647.83Show/hide
Query:  WLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKYMKGSD
        W+WTRK+KEIAI +HS FL  LL  FG DC   +K E+  ++   +
Subjt:  WLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKYMKGSD

Q8GY96 Phosphoglycerate mutase-like protein5.8e-0561.11Show/hide
Query:  VRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQ
        VR+  G+HN A EKD S   S DYFDA L  LGWQQ
Subjt:  VRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQ

Q9FGF0 Phosphoglycerate mutase-like protein 15.9e-1065Show/hide
Query:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEIC
        +WLWTRK+KEIAI THS FLF  L    N+CHP +K EIC
Subjt:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEIC

Arabidopsis top hitse value%identityAlignment
AT5G64460.1 Phosphoglycerate mutase family protein4.2e-1165Show/hide
Query:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEIC
        +WLWTRK+KEIAI THS FLF  L    N+CHP +K EIC
Subjt:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEIC

AT5G64460.2 Phosphoglycerate mutase family protein4.2e-1165Show/hide
Query:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEIC
        +WLWTRK+KEIAI THS FLF  L    N+CHP +K EIC
Subjt:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEIC

AT5G64460.3 Phosphoglycerate mutase family protein4.2e-1165Show/hide
Query:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEIC
        +WLWTRK+KEIAI THS FLF  L    N+CHP +K EIC
Subjt:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEIC

AT5G64460.4 Phosphoglycerate mutase family protein4.2e-1165Show/hide
Query:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEIC
        +WLWTRK+KEIAI THS FLF  L    N+CHP +K EIC
Subjt:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEIC

AT5G64460.5 Phosphoglycerate mutase family protein4.2e-1165Show/hide
Query:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEIC
        +WLWTRK+KEIAI THS FLF  L    N+CHP +K EIC
Subjt:  SWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEIC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTATGGCGGTTTTGTTCGTCGGCGAAATGGTGTTATCATTGATACGGAGCTTTGTGAGAAATGTCCTGGGAGTTCATAATGCTGCAATGGAAAAGGATGGCAGTTT
GCTTCAGTCTTCTGATTATTTTGATGCTCAACTTATCACTTTAGGATGGCAACAGGAGAACATTAAGAAAACCAAGTATGCAAATAGTTGGCTGTGGACACGGAAGCAGA
AAGAGATTGCAATTGCCACCCACAGCGTGTTCTTATTTGAACTTCTGAAGGGTTTTGGAAATGACTGCCATCCATCTATAAAGAGCGAAATCTGCAAATATATGAAGGGA
TCAGATCCATCATGA
mRNA sequenceShow/hide mRNA sequence
GTCCCATTCGTCTTGAAGCTGCGTTGCTACGCTCTTCCTTCATTGTTTGCTCTCTTCTCCTGCTCTCTTCAGGTGGATTGGTTACGTTCTCTTTCTTTTTCTCTCGGACT
TTTTTTGTTTCTTCAATGACTATGGCGGTTTTGTTCGTCGGCGAAATGGTGTTATCATTGATACGGAGCTTTGTGAGAAATGTCCTGGGAGTTCATAATGCTGCAATGGA
AAAGGATGGCAGTTTGCTTCAGTCTTCTGATTATTTTGATGCTCAACTTATCACTTTAGGATGGCAACAGGAGAACATTAAGAAAACCAAGTATGCAAATAGTTGGCTGT
GGACACGGAAGCAGAAAGAGATTGCAATTGCCACCCACAGCGTGTTCTTATTTGAACTTCTGAAGGGTTTTGGAAATGACTGCCATCCATCTATAAAGAGCGAAATCTGC
AAATATATGAAGGGATCAGATCCATCATGAACCATTACCCTGGCAAAACTTGAGGATGAAGCTACAAGTTGCGTAGTAGCTTGAAGAAGGTAAAGCTTGTGCTGTTCATT
TTCCCC
Protein sequenceShow/hide protein sequence
MTMAVLFVGEMVLSLIRSFVRNVLGVHNAAMEKDGSLLQSSDYFDAQLITLGWQQENIKKTKYANSWLWTRKQKEIAIATHSVFLFELLKGFGNDCHPSIKSEICKYMKG
SDPS