; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G015410 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G015410
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionneurochondrin homolog isoform X1
Genome locationCmo_Chr01:11893399..11895823
RNA-Seq ExpressionCmoCh01G015410
SyntenyCmoCh01G015410
Gene Ontology termsNA
InterPro domainsIPR008709 - Neurochondrin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608140.1 hypothetical protein SDJN03_01482, partial [Cucurbita argyrosperma subsp. sororia]4.2e-2496.97Show/hide
Query:  MELQQERTPSESIEDSLKLLKDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTGQEL
        MELQQERTPSESIEDSLKLLKDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTG  L
Subjt:  MELQQERTPSESIEDSLKLLKDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTGQEL

KAG7024439.1 Neurochondrin [Cucurbita argyrosperma subsp. argyrosperma]1.2e-1831.12Show/hide
Query:  MELQQERTPSESIEDSLKLL---KDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTG----------------------------------
        MELQQE+TPS SIED LKLL   KDEQRLAGLFLVT IC+VDD ASLTRVY AVGAKFLDRLLRTG                                  
Subjt:  MELQQERTPSESIEDSLKLL---KDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTG----------------------------------

Query:  -------QELPFWRSVL-NFYILYQ-----LLPLLESPFYINLEAE----------------------INGAN----NKDYLRSFLTNASIVDITLKCLS
                ++P    +L N  +LY+     L   LE  + ++  ++                       +G++    +   ++  ++  S+  I + CL 
Subjt:  -------QELPFWRSVL-NFYILYQ-----LLPLLESPFYINLEAE----------------------INGAN----NKDYLRSFLTNASIVDITLKCLS

Query:  CL-------------------------------------------VPSNVWSKHMRDGISAIL--QLSFTHFLQALSLAVSM------------------
         L                                           VPS+ WSKHMR+G+SAIL  + +    LQALSLA SM                  
Subjt:  CL-------------------------------------------VPSNVWSKHMRDGISAIL--QLSFTHFLQALSLAVSM------------------

Query:  ------------------------------------------ESVILKQRNVATAFFLVEEIIKSISNVREDQAIL
                                                  E +I+KQRNVATAF LVE+IIK +SNV EDQ  L
Subjt:  ------------------------------------------ESVILKQRNVATAFFLVEEIIKSISNVREDQAIL

KAG7031777.1 hypothetical protein SDJN02_05818, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-3444.91Show/hide
Query:  MELQQERTPSESIEDSLKLLKDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTGQEL----------------------------------
        MELQQERTPSESIEDSLKLLKDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTG  L                                  
Subjt:  MELQQERTPSESIEDSLKLLKDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTGQEL----------------------------------

Query:  -PFWRSVLNFYI---LYQLLPL---------------LESPFYINLEAEINGANNKDYLRSFLTNASIVDITLKCLSCLVPSNVWSKHMRDGISAI-LQL
         P  R  + F +   L+Q  PL               +   F+  L + I+  +   Y RS    +S+++   + L  +  ++V        I  +  QL
Subjt:  -PFWRSVLNFYI---LYQLLPL---------------LESPFYINLEAEINGANNKDYLRSFLTNASIVDITLKCLSCLVPSNVWSKHMRDGISAI-LQL

Query:  SFTHFLQALSLAVSM--------------------------------------ESVILKQRNVA-TAFFLVEEIIKSISNVREDQ
        SFTHFLQALSLAVSM                                      ESVILKQRNVA TAFFLVE+IIKSISNVREDQ
Subjt:  SFTHFLQALSLAVSM--------------------------------------ESVILKQRNVA-TAFFLVEEIIKSISNVREDQ

XP_004145520.1 neurochondrin isoform X2 [Cucumis sativus]1.2e-1832.88Show/hide
Query:  MELQQERTPSESIEDSLKLL---KDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTG----------------------------------
        MELQQE+TPS SIED LKLL   KDEQRLAGLFLVT IC+VDD ASL+RVY AVG+KFLDRLLRTG                                  
Subjt:  MELQQERTPSESIEDSLKLL---KDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTG----------------------------------

Query:  -------QELPFWRSVLN----FYILYQLLPLL----------ESPFYINLEAEI---------NGAN-------------NKDYLRSFLTNA--SIVDI
                + P     L+    F +L + L  L           +  Y +   +I         +G+              +K  L + + NA   + DI
Subjt:  -------QELPFWRSVLN----FYILYQLLPLL----------ESPFYINLEAEI---------NGAN-------------NKDYLRSFLTNA--SIVDI

Query:  ------------------TLKCLSCL--------------VPSNVWSKHMRDGISAIL--QLSFTHFLQALSLAVSM-----------------------
                           L+ LS +              VPSNVW+KHMRDG+SAIL  + +    LQAL LA SM                       
Subjt:  ------------------TLKCLSCL--------------VPSNVWSKHMRDGISAIL--QLSFTHFLQALSLAVSM-----------------------

Query:  -------------------------------------ESVILKQRNVATAFFLVEEIIKSISNVREDQAIL
                                             E +ILKQRNVATAF LVE+IIK ISNV EDQ  L
Subjt:  -------------------------------------ESVILKQRNVATAFFLVEEIIKSISNVREDQAIL

XP_022976133.1 neurochondrin homolog isoform X1 [Cucurbita maxima]1.6e-1830.19Show/hide
Query:  MELQQERTPSESIEDSLKLL---KDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTG------------QELPFWRSVLNFYILYQLLP--
        MELQQE+TPS SIED LKLL   KDEQRL GLFLVT IC+VDD ASLTRVY AVGAKFLDRLLRTG                + +  +   + +  +P  
Subjt:  MELQQERTPSESIEDSLKLL---KDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTG------------QELPFWRSVLNFYILYQLLP--

Query:  ------LLESPFYINLEAEINGANNKD------YLRSFLTNASI---------------------------------------VDITLKCLSCL------
              + + P  + + +  +G++  +      YL S  ++A +                                       + + +  ++CL      
Subjt:  ------LLESPFYINLEAEINGANNKD------YLRSFLTNASI---------------------------------------VDITLKCLSCL------

Query:  ----------------------------------------VPSNVWSKHMRDGISAIL--QLSFTHFLQALSLAVSM-----------------------
                                                VPS+VWSKHMR+G+SAIL  + +    LQALSLA SM                       
Subjt:  ----------------------------------------VPSNVWSKHMRDGISAIL--QLSFTHFLQALSLAVSM-----------------------

Query:  -------------------------------------ESVILKQRNVATAFFLVEEIIKSISNVREDQAIL
                                             E +I+KQRNVATAF LVE+IIK +SNV EDQ  L
Subjt:  -------------------------------------ESVILKQRNVATAFFLVEEIIKSISNVREDQAIL

TrEMBL top hitse value%identityAlignment
A0A0A0L170 Uncharacterized protein2.2e-1832.7Show/hide
Query:  ELQQERTPSESIEDSLKLL---KDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTG-----------------------------------
        ELQQE+TPS SIED LKLL   KDEQRLAGLFLVT IC+VDD ASL+RVY AVG+KFLDRLLRTG                                   
Subjt:  ELQQERTPSESIEDSLKLL---KDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTG-----------------------------------

Query:  ------QELPFWRSVLN----FYILYQLLPLL----------ESPFYINLEAEI---------NGAN-------------NKDYLRSFLTNA--SIVDI-
               + P     L+    F +L + L  L           +  Y +   +I         +G+              +K  L + + NA   + DI 
Subjt:  ------QELPFWRSVLN----FYILYQLLPLL----------ESPFYINLEAEI---------NGAN-------------NKDYLRSFLTNA--SIVDI-

Query:  -----------------TLKCLSCL--------------VPSNVWSKHMRDGISAIL--QLSFTHFLQALSLAVSM------------------------
                          L+ LS +              VPSNVW+KHMRDG+SAIL  + +    LQAL LA SM                        
Subjt:  -----------------TLKCLSCL--------------VPSNVWSKHMRDGISAIL--QLSFTHFLQALSLAVSM------------------------

Query:  ------------------------------------ESVILKQRNVATAFFLVEEIIKSISNVREDQAIL
                                            E +ILKQRNVATAF LVE+IIK ISNV EDQ  L
Subjt:  ------------------------------------ESVILKQRNVATAFFLVEEIIKSISNVREDQAIL

A0A6J1F631 uncharacterized protein LOC111442684 isoform X29.9e-1930.19Show/hide
Query:  MELQQERTPSESIEDSLKLL---KDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTG------------QELPFWRSVLNFYILYQLLP--
        MELQQE+TPS SIED LKLL   KDEQRLAGLFLVT IC+VDD ASLTRVY AVGAKFLDRLLRTG                + +  +   + +  +P  
Subjt:  MELQQERTPSESIEDSLKLL---KDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTG------------QELPFWRSVLNFYILYQLLP--

Query:  ------LLESPFYINLEAEINGANNKD------YLRSFLTNASI---------------------------------------VDITLKCLSCL------
              + + P  + + +  +G++  +      YL S  ++A +                                       + + +  + CL      
Subjt:  ------LLESPFYINLEAEINGANNKD------YLRSFLTNASI---------------------------------------VDITLKCLSCL------

Query:  ----------------------------------------VPSNVWSKHMRDGISAIL--QLSFTHFLQALSLAVSM-----------------------
                                                VPS+ WSKHMR+G+SAIL  + +    LQALSLA SM                       
Subjt:  ----------------------------------------VPSNVWSKHMRDGISAIL--QLSFTHFLQALSLAVSM-----------------------

Query:  -------------------------------------ESVILKQRNVATAFFLVEEIIKSISNVREDQAIL
                                             E +I+KQRNVATAF LVE+IIK +SNV EDQ  L
Subjt:  -------------------------------------ESVILKQRNVATAFFLVEEIIKSISNVREDQAIL

A0A6J1FC19 uncharacterized protein LOC111442684 isoform X19.9e-1930.19Show/hide
Query:  MELQQERTPSESIEDSLKLL---KDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTG------------QELPFWRSVLNFYILYQLLP--
        MELQQE+TPS SIED LKLL   KDEQRLAGLFLVT IC+VDD ASLTRVY AVGAKFLDRLLRTG                + +  +   + +  +P  
Subjt:  MELQQERTPSESIEDSLKLL---KDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTG------------QELPFWRSVLNFYILYQLLP--

Query:  ------LLESPFYINLEAEINGANNKD------YLRSFLTNASI---------------------------------------VDITLKCLSCL------
              + + P  + + +  +G++  +      YL S  ++A +                                       + + +  + CL      
Subjt:  ------LLESPFYINLEAEINGANNKD------YLRSFLTNASI---------------------------------------VDITLKCLSCL------

Query:  ----------------------------------------VPSNVWSKHMRDGISAIL--QLSFTHFLQALSLAVSM-----------------------
                                                VPS+ WSKHMR+G+SAIL  + +    LQALSLA SM                       
Subjt:  ----------------------------------------VPSNVWSKHMRDGISAIL--QLSFTHFLQALSLAVSM-----------------------

Query:  -------------------------------------ESVILKQRNVATAFFLVEEIIKSISNVREDQAIL
                                             E +I+KQRNVATAF LVE+IIK +SNV EDQ  L
Subjt:  -------------------------------------ESVILKQRNVATAFFLVEEIIKSISNVREDQAIL

A0A6J1IL84 neurochondrin homolog isoform X17.6e-1930.19Show/hide
Query:  MELQQERTPSESIEDSLKLL---KDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTG------------QELPFWRSVLNFYILYQLLP--
        MELQQE+TPS SIED LKLL   KDEQRL GLFLVT IC+VDD ASLTRVY AVGAKFLDRLLRTG                + +  +   + +  +P  
Subjt:  MELQQERTPSESIEDSLKLL---KDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTG------------QELPFWRSVLNFYILYQLLP--

Query:  ------LLESPFYINLEAEINGANNKD------YLRSFLTNASI---------------------------------------VDITLKCLSCL------
              + + P  + + +  +G++  +      YL S  ++A +                                       + + +  ++CL      
Subjt:  ------LLESPFYINLEAEINGANNKD------YLRSFLTNASI---------------------------------------VDITLKCLSCL------

Query:  ----------------------------------------VPSNVWSKHMRDGISAIL--QLSFTHFLQALSLAVSM-----------------------
                                                VPS+VWSKHMR+G+SAIL  + +    LQALSLA SM                       
Subjt:  ----------------------------------------VPSNVWSKHMRDGISAIL--QLSFTHFLQALSLAVSM-----------------------

Query:  -------------------------------------ESVILKQRNVATAFFLVEEIIKSISNVREDQAIL
                                             E +I+KQRNVATAF LVE+IIK +SNV EDQ  L
Subjt:  -------------------------------------ESVILKQRNVATAFFLVEEIIKSISNVREDQAIL

A0A6J1IMN8 neurochondrin homolog isoform X27.6e-1930.19Show/hide
Query:  MELQQERTPSESIEDSLKLL---KDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTG------------QELPFWRSVLNFYILYQLLP--
        MELQQE+TPS SIED LKLL   KDEQRL GLFLVT IC+VDD ASLTRVY AVGAKFLDRLLRTG                + +  +   + +  +P  
Subjt:  MELQQERTPSESIEDSLKLL---KDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTG------------QELPFWRSVLNFYILYQLLP--

Query:  ------LLESPFYINLEAEINGANNKD------YLRSFLTNASI---------------------------------------VDITLKCLSCL------
              + + P  + + +  +G++  +      YL S  ++A +                                       + + +  ++CL      
Subjt:  ------LLESPFYINLEAEINGANNKD------YLRSFLTNASI---------------------------------------VDITLKCLSCL------

Query:  ----------------------------------------VPSNVWSKHMRDGISAIL--QLSFTHFLQALSLAVSM-----------------------
                                                VPS+VWSKHMR+G+SAIL  + +    LQALSLA SM                       
Subjt:  ----------------------------------------VPSNVWSKHMRDGISAIL--QLSFTHFLQALSLAVSM-----------------------

Query:  -------------------------------------ESVILKQRNVATAFFLVEEIIKSISNVREDQAIL
                                             E +I+KQRNVATAF LVE+IIK +SNV EDQ  L
Subjt:  -------------------------------------ESVILKQRNVATAFFLVEEIIKSISNVREDQAIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G32050.1 neurochondrin family protein4.0e-1263.49Show/hide
Query:  QQERTPSESIEDSLKLLK---DEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTG
        Q+ER+P  S++D LKLLK   DEQRLAGL LVT  C+ DD  SL +VY AVG  FLDRL RTG
Subjt:  QQERTPSESIEDSLKLLK---DEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTACAGCAGGAGCGAACACCGTCGGAATCCATAGAAGATTCTTTGAAGCTCTTGAAGGACGAGCAGCGTCTCGCTGGCCTTTTCTTAGTCACTATAATTTGCGA
GGTGGACGATCGTGCCTCGCTTACTAGAGTTTACTATGCTGTTGGAGCGAAGTTTCTTGATCGGCTTCTCAGGACTGGTCAGGAGCTTCCGTTTTGGAGGAGCGTTTTGA
ATTTTTATATCTTGTATCAACTGCTTCCGTTGTTGGAGTCTCCATTCTATATAAATCTGGAAGCTGAAATTAATGGTGCTAACAATAAAGATTACTTGCGTAGTTTCTTG
ACTAATGCATCAATTGTAGACATCACGTTAAAATGTCTTTCGTGTCTAGTGCCCTCCAATGTTTGGTCCAAACATATGCGTGATGGAATTTCAGCTATCCTTCAGCTATC
CTTCACGCATTTTCTTCAGGCTCTTAGTTTGGCTGTGTCTATGGAGAGTGTTATCTTAAAGCAGCGGAATGTGGCTACTGCCTTCTTTTTGGTGGAAGAGATAATTAAGT
CGATATCAAATGTTCGTGAAGATCAAGCTATCTTGCGCAAACCCCCGATGCATGGATAG
mRNA sequenceShow/hide mRNA sequence
GGAAAGAGGTTACCGCTTGAATACTCTTCTCCATTTGAATTCTCAAGTTCATTCTCCAGTCTTGAGTTCTCTGCTTTCATGGAGTTACAGCAGGAGCGAACACCGTCGGA
ATCCATAGAAGATTCTTTGAAGCTCTTGAAGGACGAGCAGCGTCTCGCTGGCCTTTTCTTAGTCACTATAATTTGCGAGGTGGACGATCGTGCCTCGCTTACTAGAGTTT
ACTATGCTGTTGGAGCGAAGTTTCTTGATCGGCTTCTCAGGACTGGTCAGGAGCTTCCGTTTTGGAGGAGCGTTTTGAATTTTTATATCTTGTATCAACTGCTTCCGTTG
TTGGAGTCTCCATTCTATATAAATCTGGAAGCTGAAATTAATGGTGCTAACAATAAAGATTACTTGCGTAGTTTCTTGACTAATGCATCAATTGTAGACATCACGTTAAA
ATGTCTTTCGTGTCTAGTGCCCTCCAATGTTTGGTCCAAACATATGCGTGATGGAATTTCAGCTATCCTTCAGCTATCCTTCACGCATTTTCTTCAGGCTCTTAGTTTGG
CTGTGTCTATGGAGAGTGTTATCTTAAAGCAGCGGAATGTGGCTACTGCCTTCTTTTTGGTGGAAGAGATAATTAAGTCGATATCAAATGTTCGTGAAGATCAAGCTATC
TTGCGCAAACCCCCGATGCATGGATAG
Protein sequenceShow/hide protein sequence
MELQQERTPSESIEDSLKLLKDEQRLAGLFLVTIICEVDDRASLTRVYYAVGAKFLDRLLRTGQELPFWRSVLNFYILYQLLPLLESPFYINLEAEINGANNKDYLRSFL
TNASIVDITLKCLSCLVPSNVWSKHMRDGISAILQLSFTHFLQALSLAVSMESVILKQRNVATAFFLVEEIIKSISNVREDQAILRKPPMHG