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CmoCh01G015580 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G015580
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCoatomer subunit zeta
Genome locationCmo_Chr01:11984215..11986439
RNA-Seq ExpressionCmoCh01G015580
SyntenyCmoCh01G015580
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0030126 - COPI vesicle coat (cellular component)
InterPro domainsIPR039652 - Coatomer subunit zeta


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608152.1 TSET complex member tstD, partial [Cucurbita argyrosperma subsp. sororia]6.9e-37100Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
XP_008466411.1 PREDICTED: uncharacterized protein LOC103503824 [Cucumis melo]9.0e-3798.78Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVY+VYTVLGDVAVYVVGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
XP_022134177.1 uncharacterized protein LOC111006502 [Momordica charantia]9.0e-3798.78Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVY+VYTVLGDVAVYVVGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
XP_022941369.1 uncharacterized protein LOC111446682 [Cucurbita moschata]6.9e-37100Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
XP_038896955.1 TSET complex member tstD [Benincasa hispida]9.0e-3798.78Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVY+VYTVLGDVAVYVVGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
TrEMBL top hitse value%identityAlignment
A0A1S3CRC6 Coatomer subunit zeta4.4e-3798.78Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVY+VYTVLGDVAVYVVGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
A0A5D3E691 Coatomer subunit zeta4.4e-3798.78Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVY+VYTVLGDVAVYVVGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
A0A6J1BYX2 Coatomer subunit zeta4.4e-3798.78Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVY+VYTVLGDVAVYVVGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
A0A6J1FN50 Coatomer subunit zeta3.3e-37100Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
A0A6J1J445 Coatomer subunit zeta3.3e-37100Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
        MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
SwissProt top hitse value%identityAlignment
C0HLF1 TSET complex member tstD1.6e-0428.92Show/hide
Query:  MLLAVLIANSVGNILVERFH-GVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
        M+ ++LI N+ GNI+  +++  +  E++  +   L +   D    +KNE+  V        V+T +GD+ +++ G +E DELA
Subjt:  MLLAVLIANSVGNILVERFH-GVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
Arabidopsis top hitse value%identityAlignment
AT1G15370.1 SNARE-like superfamily protein1.8e-3582.93Show/hide
Query:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA
        M+LAVL ANSVGN+L+ERF+GVPAEERLHWRSFLVKLGADNLKG KNEEL VA HKSVY+VYT+LGDV++++VGKDEYDELA
Subjt:  MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCTTGCCGTGCTGATTGCCAACTCCGTCGGCAACATTCTCGTCGAACGGTTTCACGGAGTTCCGGCAGAGGAGCGATTGCATTGGCGATCCTTTCTAGTGAAGCT
GGGAGCTGATAATCTCAAAGGTGCAAAAAATGAAGAGCTCTATGTTGCTTCGCACAAGTCTGTATACGTTGTTTACACAGTCCTCGGTGATGTTGCTGTTTATGTTGTTG
GGAAGGATGAATATGATGAATTAGCTTGTAAGTAA
mRNA sequenceShow/hide mRNA sequence
TAGAAGAAGAGGAAAAGGAAGAACAAGGAAAAAGAAAAAGTGCGATAGAGAGAATCTGGGATTGTAAGATTTATTTCGAGAATTCGAACTAGAATATAACTCGGCTCTGA
ATCAGATTTCTTCCTTGAGAAACTCCGATCGAATCCGAAAGATCAGGCATGTTGCTTGCCGTGCTGATTGCCAACTCCGTCGGCAACATTCTCGTCGAACGGTTTCACGG
AGTTCCGGCAGAGGAGCGATTGCATTGGCGATCCTTTCTAGTGAAGCTGGGAGCTGATAATCTCAAAGGTGCAAAAAATGAAGAGCTCTATGTTGCTTCGCACAAGTCTG
TATACGTTGTTTACACAGTCCTCGGTGATGTTGCTGTTTATGTTGTTGGGAAGGATGAATATGATGAATTAGCTTGTAAGTAA
Protein sequenceShow/hide protein sequence
MLLAVLIANSVGNILVERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELYVASHKSVYVVYTVLGDVAVYVVGKDEYDELACK