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CmoCh01G015850 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G015850
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr01:12185553..12185782
RNA-Seq ExpressionCmoCh01G015850
SyntenyCmoCh01G015850
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009521 - photosystem (cellular component)
GO:0009536 - plastid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QZL37324.1 hypothetical chloroplast RF68 [Sparganium eurycarpum]5.8e-1569.01Show/hide
Query:  MDNYLSSTERG--------TYQCIFTDQELRDRLFHSGVAEGSYHSSLFFHVFPGCPEKAPINRIFLILPS
        MD+YLSST  G        T Q IFTDQELRD  FHSGV EGSYHSSLFFH FPG  EKA INRI LI PS
Subjt:  MDNYLSSTERG--------TYQCIFTDQELRDRLFHSGVAEGSYHSSLFFHVFPGCPEKAPINRIFLILPS

QZL37400.1 hypothetical chloroplast RF68 [Sparganium japonicum]5.8e-1569.01Show/hide
Query:  MDNYLSSTERG--------TYQCIFTDQELRDRLFHSGVAEGSYHSSLFFHVFPGCPEKAPINRIFLILPS
        MD+YLSST  G        T Q IFTDQELRD  FHSGV EGSYHSSLFFH FPG  EKA INRI LI PS
Subjt:  MDNYLSSTERG--------TYQCIFTDQELRDRLFHSGVAEGSYHSSLFFHVFPGCPEKAPINRIFLILPS

QZL37488.1 hypothetical chloroplast RF68 [Sparganium natans]5.8e-1569.01Show/hide
Query:  MDNYLSSTERG--------TYQCIFTDQELRDRLFHSGVAEGSYHSSLFFHVFPGCPEKAPINRIFLILPS
        MD+YLSST  G        T Q IFTDQELRD  FHSGV EGSYHSSLFFH FPG  EKA INRI LI PS
Subjt:  MDNYLSSTERG--------TYQCIFTDQELRDRLFHSGVAEGSYHSSLFFHVFPGCPEKAPINRIFLILPS

QZL37576.1 hypothetical chloroplast RF68 [Sparganium stoloniferum]5.8e-1569.01Show/hide
Query:  MDNYLSSTERG--------TYQCIFTDQELRDRLFHSGVAEGSYHSSLFFHVFPGCPEKAPINRIFLILPS
        MD+YLSST  G        T Q IFTDQELRD  FHSGV EGSYHSSLFFH FPG  EKA INRI LI PS
Subjt:  MDNYLSSTERG--------TYQCIFTDQELRDRLFHSGVAEGSYHSSLFFHVFPGCPEKAPINRIFLILPS

QZL37752.1 hypothetical chloroplast RF68 [Sparganium subglobosum]5.8e-1569.01Show/hide
Query:  MDNYLSSTERG--------TYQCIFTDQELRDRLFHSGVAEGSYHSSLFFHVFPGCPEKAPINRIFLILPS
        MD+YLSST  G        T Q IFTDQELRD  FHSGV EGSYHSSLFFH FPG  EKA INRI LI PS
Subjt:  MDNYLSSTERG--------TYQCIFTDQELRDRLFHSGVAEGSYHSSLFFHVFPGCPEKAPINRIFLILPS

TrEMBL top hitse value%identityAlignment
A0A2H5QKG3 Uncharacterized protein ycf681.5e-0886.49Show/hide
Query:  FHSGVAEGSYHSSLFFHVFPGCPEKAPINRIFLILPS
        FHSGV EGSYHSSLFFH FPG  EKA INRIFLILPS
Subjt:  FHSGVAEGSYHSSLFFHVFPGCPEKAPINRIFLILPS

A0A2P5XJ56 Uncharacterized protein ycf688.5e-1286.36Show/hide
Query:  QELRDRLFHSGVAEGSYHSSLFFHVFPGCPEKAPINRIFLILPS
        QELRDR FHSGV EGSYHSSLFFH FPG  EKA INRIFLILPS
Subjt:  QELRDRLFHSGVAEGSYHSSLFFHVFPGCPEKAPINRIFLILPS

A0A5K1HFE7 Uncharacterized protein ycf68 (Fragment)1.5e-0872.92Show/hide
Query:  IFTDQELRDRLFHSGVAEGSYHSSLFFHVFPGCPEKAPINRIFLILPS
        IFTDQELRD     GV EGSYHSSLFF +FPG  EKA INRI LI PS
Subjt:  IFTDQELRDRLFHSGVAEGSYHSSLFFHVFPGCPEKAPINRIFLILPS

A0A6M3YWL4 Uncharacterized protein ycf682.0e-0855.26Show/hide
Query:  MDNYLSSTERGTYQCIFTDQELRDRL-----------FHSGVAEGSYHSSL--FFHVFPGCPEKAPINRIFLILPS
        MD+YLSST  G+       + L   L           FHSGV EGSYHSSL  FFH FPG  EKA INRIFLILPS
Subjt:  MDNYLSSTERGTYQCIFTDQELRDRL-----------FHSGVAEGSYHSSL--FFHVFPGCPEKAPINRIFLILPS

A0A7L7SDI0 Uncharacterized protein ycf681.5e-0856Show/hide
Query:  MDNYLSSTERGTYQCIFTDQELRDRL-----------FHSGVAEGSYHSSL-FFHVFPGCPEKAPINRIFLILPS
        MD+YLSST  G+       + L   L           FHSGV EGSYHSSL FFH FPG  EKA INRIFLILPS
Subjt:  MDNYLSSTERGTYQCIFTDQELRDRL-----------FHSGVAEGSYHSSL-FFHVFPGCPEKAPINRIFLILPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAACTACCTCTCGAGCACAGAACGAGGCACCTATCAATGTATCTTCACAGACCAAGAACTACGAGATCGCCTCTTTCATTCTGGGGTGGCGGAGGGATCGTACCA
CTCGAGCCTTTTTTTTCATGTTTTTCCTGGATGTCCGGAGAAAGCTCCAATCAATAGGATTTTCTTAATCCTCCCTTCCCTAAGAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAACTACCTCTCGAGCACAGAACGAGGCACCTATCAATGTATCTTCACAGACCAAGAACTACGAGATCGCCTCTTTCATTCTGGGGTGGCGGAGGGATCGTACCA
CTCGAGCCTTTTTTTTCATGTTTTTCCTGGATGTCCGGAGAAAGCTCCAATCAATAGGATTTTCTTAATCCTCCCTTCCCTAAGAATGTGA
Protein sequenceShow/hide protein sequence
MDNYLSSTERGTYQCIFTDQELRDRLFHSGVAEGSYHSSLFFHVFPGCPEKAPINRIFLILPSLRM