CuGenDBv2

Gene ID	CmoCh01G016060
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Protein of unknown function (DUF1218)
Genome location	Cmo_Chr01:12285580..12287741
RNA-Seq Expression	CmoCh01G016060
Synteny	CmoCh01G016060
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR009606 - Modifying wall lignin-1/2

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022143268.1 uncharacterized protein LOC111013177 [Momordica charantia]

1.7e-81

83.6

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Query:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV
        MAVSVK M+L V T GVISFIFG+VAENKKPA+GT IPGKGLVICKYP DPTVALG+LS +FLLASSIAGY SLFYPYQGKSVPRGAMF++ SFSVFFN+
Subjt:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV

Query:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA
        A FTTGLAI LLVWPTVTEQLHLTRN+HHN  T+CPTAKTGLLGGGAFLSLDS L WLVALMLAGNAREDYF EIEE+ +N++ALKSSA
Subjt:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA

XP_022143291.1 uncharacterized protein LOC111013196 [Momordica charantia]

1.2e-82

85.19

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Query:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV
        MAVSVK MSL V T GVISFIFG+VAENKKPA+GT IPGKGLVICKYPGDPTVALG+LS LFLLASSIAGY SLFYPYQGKSVPRGA+F++ SFS+FFNV
Subjt:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV

Query:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA
        A FTTGLAI LLVWPTVTEQLHL RN+HHN  T+CPTAKTGLLGGGAFLSLDS LFWLVALMLAGNAREDYF EIEE+ SN +ALKSSA
Subjt:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA

XP_022940216.1 uncharacterized protein LOC111445904 [Cucurbita moschata]

5.2e-99

100

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Query:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV
        MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV
Subjt:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV

Query:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA
        AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA
Subjt:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA

XP_022981979.1 uncharacterized protein LOC111480966 [Cucurbita maxima]

1.4e-96

97.88

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Query:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV
        MAVSVKLMSL VGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV
Subjt:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV

Query:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA
        AQFTTGLAIALLVWPTVTEQLHL  NIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEE+ESNAQALKSSA
Subjt:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA

XP_023524397.1 uncharacterized protein LOC111788304 [Cucurbita pepo subsp. pepo]

7.1e-96

97.87

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Query:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV
        MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV
Subjt:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV

Query:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSS
        AQFTTGLAIALLVWPTVTEQLHL  NIHHN VTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEE+ESNAQALKSS
Subjt:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSS

TrEMBL top hits

e value

%identity

Alignment

A0A5D3E6F5 Uncharacterized protein

1.1e-81

82.01

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Query:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV
        MAVSVKLMSLTV  LGV SFIFG++AENKKPASGT IPGKG+VIC+YPGDPTV LG+LS  FLLASS+AGY SLFYPYQGKSVPRGAMFK+ SFS FFN+
Subjt:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV

Query:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA
        A FTTGLAI LLVWPTVTEQLHL+RN+HHN  T CPTAKTGLLGGGAFLSLDS LFWLVALMLAGNAREDYF+EI E+ +N+++LKSSA
Subjt:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA

A0A6J1CPU8 uncharacterized protein LOC111013196

5.7e-83

85.19

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Query:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV
        MAVSVK MSL V T GVISFIFG+VAENKKPA+GT IPGKGLVICKYPGDPTVALG+LS LFLLASSIAGY SLFYPYQGKSVPRGA+F++ SFS+FFNV
Subjt:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV

Query:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA
        A FTTGLAI LLVWPTVTEQLHL RN+HHN  T+CPTAKTGLLGGGAFLSLDS LFWLVALMLAGNAREDYF EIEE+ SN +ALKSSA
Subjt:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA

A0A6J1CQA7 uncharacterized protein LOC111013177

8.2e-82

83.6

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Query:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV
        MAVSVK M+L V T GVISFIFG+VAENKKPA+GT IPGKGLVICKYP DPTVALG+LS +FLLASSIAGY SLFYPYQGKSVPRGAMF++ SFSVFFN+
Subjt:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV

Query:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA
        A FTTGLAI LLVWPTVTEQLHLTRN+HHN  T+CPTAKTGLLGGGAFLSLDS L WLVALMLAGNAREDYF EIEE+ +N++ALKSSA
Subjt:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA

A0A6J1FIZ4 uncharacterized protein LOC111445904

2.5e-99

100

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Query:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV
        MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV
Subjt:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV

Query:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA
        AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA
Subjt:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA

A0A6J1J3B8 uncharacterized protein LOC111480966

6.9e-97

97.88

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Query:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV
        MAVSVKLMSL VGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV
Subjt:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV

Query:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA
        AQFTTGLAIALLVWPTVTEQLHL  NIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEE+ESNAQALKSSA
Subjt:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G31130.1 Protein of unknown function (DUF1218)

3.8e-71

72.73

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Query:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV
        MAVS+K MSL V  LGV+SF+ G++AENKKPASGT I GKG+VICKYP DPTVALG+LS  FLLA ++AGY SLF  Y+GKSVP   +FK+ SFSVFFN+
Subjt:  MAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVFFNV

Query:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIE
        A  T+GLA++LL+WPT+TEQLHLTRN+H N  T CPTAKTGLLGGGAF+SLDSCLFWLVALMLA NARED+F+E+E
Subjt:  AQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIE

Sequences

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CDS sequence

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ATGCTTCAGGTCTCACTGTTATCAATTATCTGGAGAATAATGGCTGTTTCTGTTAAATTGATGTCTCTTACTGTTGGAACTTTGGGTGTAATATCCTTTATATTTGGAAT
CGTTGCCGAAAACAAGAAGCCTGCATCTGGAACTCTCATCCCAGGCAAAGGCCTTGTTATCTGTAAATATCCAGGCGACCCGACGGTTGCCTTGGGATTTCTATCTTTTC
TGTTTCTTCTGGCTTCTTCCATTGCGGGATACACCTCTCTGTTCTATCCTTACCAAGGAAAATCGGTTCCTCGAGGAGCGATGTTTAAGAATGGTAGTTTCTCTGTGTTC
TTCAACGTTGCTCAATTCACAACTGGGTTAGCTATTGCTTTGCTCGTATGGCCCACGGTCACGGAGCAACTTCACTTGACGCGTAACATTCATCACAATGATGTGACAAA
GTGCCCGACCGCTAAGACCGGTCTTCTAGGTGGCGGTGCATTTCTATCCCTGGATTCATGCCTCTTTTGGCTGGTTGCTCTGATGTTGGCTGGTAATGCACGAGAAGACT
ACTTTAATGAAATAGAAGAAGAAGAAAGCAATGCTCAAGCTCTCAAGAGCAGTGCATGA

mRNA sequence

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Protein sequence

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MLQVSLLSIIWRIMAVSVKLMSLTVGTLGVISFIFGIVAENKKPASGTLIPGKGLVICKYPGDPTVALGFLSFLFLLASSIAGYTSLFYPYQGKSVPRGAMFKNGSFSVF
FNVAQFTTGLAIALLVWPTVTEQLHLTRNIHHNDVTKCPTAKTGLLGGGAFLSLDSCLFWLVALMLAGNAREDYFNEIEEEESNAQALKSSA

CmoCh01G016060 (gene) of Cucurbita moschata (Rifu) v1 genome