CuGenDBv2

Gene ID	CmoCh01G016070
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Protein of unknown function (DUF1218)
Genome location	Cmo_Chr01:12288326..12291263
RNA-Seq Expression	CmoCh01G016070
Synteny	CmoCh01G016070
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR009606 - Modifying wall lignin-1/2

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022937371.1 uncharacterized protein LOC111443679 [Cucurbita moschata]

1.4e-85

86.77

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Query:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI
        MAVSVK+MSL VA LGVISF+FGVVAENKKPASGTPIPGKG+VICQYP+DPTV LGYLSVAFLLASS AGYFSLFYPY GKSVPRGA+FK+SSFSIFFNI
Subjt:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI

Query:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA
        ALFTTGLA+TLL WPT+TEQ+HL+RNVH++LE ACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENG S +AL+ +A
Subjt:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA

XP_022940215.1 uncharacterized protein LOC111445903 [Cucurbita moschata]

1.2e-97

100

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Query:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI
        MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI
Subjt:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI

Query:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA
        ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA
Subjt:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA

XP_022981978.1 uncharacterized protein LOC111480965 [Cucurbita maxima]

9.6e-95

97.35

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Query:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI
        MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLV CQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPY+GKSVPRGALFKNSSFSIFFNI
Subjt:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI

Query:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA
        ALFTTGLAMTLLAWPTLTEQLHLSR+VHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQ LQ SA
Subjt:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA

XP_023524395.1 uncharacterized protein LOC111788301 [Cucurbita pepo subsp. pepo]

1.3e-96

98.94

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Query:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI
        MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPY+GKSVPRGALFKNSSFSIFFNI
Subjt:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI

Query:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA
        ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQ+SA
Subjt:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA

XP_023536367.1 uncharacterized protein LOC111797557 [Cucurbita pepo subsp. pepo]

1.8e-85

86.77

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Query:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI
        M VSVK+MSL VA LGVISF+FGVVAENKKPASGTPIP KG+VICQYP+DPTV LGYLSVAFLLASS AGYFSLFYPY GKSVPRGA+FK+SSFSIFFNI
Subjt:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI

Query:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA
        ALFTTGLA+TLL WPT+TEQ+HL+RNVHY+LE ACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENG SA+AL+ +A
Subjt:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LHD9 Uncharacterized protein

2.2e-84

84.66

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Query:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI
        MAVSVK+MSLIVA LGV SF+FGV+AENKKPASGTPIPGKG+VICQYP DPTVVLGYLSVAFLLASS+AGY SLFYPY GKSVPRGA+FK+SSFS FFNI
Subjt:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI

Query:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA
        ALFTTGLA+TLL WPT+TEQLHL+RNVH+++ETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEI E G+++++L++SA
Subjt:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA

A0A6J1FA61 uncharacterized protein LOC111443679

6.7e-86

86.77

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Query:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI
        MAVSVK+MSL VA LGVISF+FGVVAENKKPASGTPIPGKG+VICQYP+DPTV LGYLSVAFLLASS AGYFSLFYPY GKSVPRGA+FK+SSFSIFFNI
Subjt:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI

Query:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA
        ALFTTGLA+TLL WPT+TEQ+HL+RNVH++LE ACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENG S +AL+ +A
Subjt:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA

A0A6J1FGG0 uncharacterized protein LOC111443681

2.2e-84

85.71

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Query:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI
        MAVSVK+MSL +A LGVISF+FGVVAENKKPASGTPI GKG+VICQYP+DPTV LGYLSVAFLLASS AGYFSLFYPY GKSVPRGA+FK+SSFSIFFNI
Subjt:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI

Query:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA
        ALFTTGLA+TLL WPT+TEQ+HL+ NVH++LE ACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEI+ENG SA+AL+ SA
Subjt:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA

A0A6J1FPY1 uncharacterized protein LOC111445903

5.8e-98

100

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Query:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI
        MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI
Subjt:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI

Query:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA
        ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA
Subjt:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA

A0A6J1J3K7 uncharacterized protein LOC111480965

4.6e-95

97.35

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Query:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI
        MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLV CQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPY+GKSVPRGALFKNSSFSIFFNI
Subjt:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI

Query:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA
        ALFTTGLAMTLLAWPTLTEQLHLSR+VHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQ LQ SA
Subjt:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G31130.1 Protein of unknown function (DUF1218)

3.2e-72

76.14

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Query:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI
        MAVS+K MSL+V+ LGV+SF+ GV+AENKKPASGTPI GKG+VIC+YPSDPTV LGYLS AFLLA + AGY SLF  Y GKSVP   LFK++SFS+FFNI
Subjt:  MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNI

Query:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIE
        AL T+GLA++LL WPT+TEQLHL+RNVH +LET+CPTAKTGLLGGGAF+SLDS LFWLVALMLA NARED+FDE+E
Subjt:  ALFTTGLAMTLLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIE

Sequences

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CDS sequence

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ATGGCCGTGTCTGTCAAGGTGATGTCTCTTATTGTCGCTTGTTTGGGCGTGATATCCTTCCTATTTGGAGTCGTTGCTGAGAACAAGAAGCCTGCATCTGGAACTCCCAT
CCCAGGCAAAGGCCTTGTTATCTGTCAATACCCGAGCGACCCAACTGTCGTCTTAGGATATCTTTCCGTTGCATTTCTTCTTGCTTCTTCAAGTGCAGGATACTTCTCTC
TGTTCTATCCTTACTATGGAAAATCCGTTCCTCGAGGTGCCTTGTTTAAGAACAGCAGTTTCTCTATTTTCTTCAACATTGCTCTGTTCACAACCGGATTAGCTATGACT
TTGCTCGCCTGGCCTACGCTCACCGAGCAACTTCACTTGTCTCGCAACGTTCATTACGATCTCGAAACAGCATGCCCAACTGCTAAGACAGGTCTTTTGGGTGGTGGTGC
ATTTCTCTCCCTTGATTCATCCCTCTTTTGGTTGGTTGCCCTGATGTTAGCTGGAAATGCTCGAGAAGACTACTTTGATGAAATAGAAGAAAATGGAACCAGTGCTCAAG
CTCTTCAAACGAGCGCATGA

mRNA sequence

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GGACGATAAAGAACACTATATATATATGGGAACATTTGACTTATCTCTTCCGTCTGCCTTCGCCTGAAATCCGGAGTGGATCAGGGAACGGGAACGAAAGCGACTTTATT
GTTCTTTTGCTACTCTCGCTTCCTCATTCGATTCTACAGTTGACGGTAACATTTAATCCGAAGAACAATGGCCGTGTCTGTCAAGGTGATGTCTCTTATTGTCGCTTGTT
TGGGCGTGATATCCTTCCTATTTGGAGTCGTTGCTGAGAACAAGAAGCCTGCATCTGGAACTCCCATCCCAGGCAAAGGCCTTGTTATCTGTCAATACCCGAGCGACCCA
ACTGTCGTCTTAGGATATCTTTCCGTTGCATTTCTTCTTGCTTCTTCAAGTGCAGGATACTTCTCTCTGTTCTATCCTTACTATGGAAAATCCGTTCCTCGAGGTGCCTT
GTTTAAGAACAGCAGTTTCTCTATTTTCTTCAACATTGCTCTGTTCACAACCGGATTAGCTATGACTTTGCTCGCCTGGCCTACGCTCACCGAGCAACTTCACTTGTCTC
GCAACGTTCATTACGATCTCGAAACAGCATGCCCAACTGCTAAGACAGGTCTTTTGGGTGGTGGTGCATTTCTCTCCCTTGATTCATCCCTCTTTTGGTTGGTTGCCCTG
ATGTTAGCTGGAAATGCTCGAGAAGACTACTTTGATGAAATAGAAGAAAATGGAACCAGTGCTCAAGCTCTTCAAACGAGCGCATGAAACTTCTTTACTCGGTAATAATA
ATAATTCAGTCTCACTTTTTACTTGTCATTAACTATTAAAGCAAGGACTTGTATGTGAATACAGATTCGTATAGTTAGAACGTTTCTCGTAGTGTATTTCATATTCAACT
TATAATATTGTGAGTTGTTATTATTATTATTATTGACAGTAAGATTATTAAGTTCTTGCCATCTATTTCATATGAATAATCCAAAATTAGCTACAA

Protein sequence

Show/hide protein sequence

MAVSVKVMSLIVACLGVISFLFGVVAENKKPASGTPIPGKGLVICQYPSDPTVVLGYLSVAFLLASSSAGYFSLFYPYYGKSVPRGALFKNSSFSIFFNIALFTTGLAMT
LLAWPTLTEQLHLSRNVHYDLETACPTAKTGLLGGGAFLSLDSSLFWLVALMLAGNAREDYFDEIEENGTSAQALQTSA

CmoCh01G016070 (gene) of Cucurbita moschata (Rifu) v1 genome