; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G016240 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G016240
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr01:12363783..12364803
RNA-Seq ExpressionCmoCh01G016240
SyntenyCmoCh01G016240
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAT96348.1 hypothetical protein VIGAN_08326900 [Vigna angularis var. angularis]3.9e-0641.3Show/hide
Query:  SDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRIPIWSTIPLTINPFDPI----PFGAHQVFDLMTSTYGHPESSNPSAIASISASVST
        S+ IGH  IGT    LS  EFHPQWL NPP+  W RI  W    LTI+P        PFG   +F           +S  S ++ +SAS+ST
Subjt:  SDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRIPIWSTIPLTINPFDPI----PFGAHQVFDLMTSTYGHPESSNPSAIASISASVST

RZS28410.1 hypothetical protein BHM03_00062011, partial [Ensete ventricosum]9.7e-0552Show/hide
Query:  CSDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRIPIWSTIPLTINP
        CS+  GH  IG  A   S  EFHPQWLRN P ALW R+      PLT  P
Subjt:  CSDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRIPIWSTIPLTINP

VVV75337.1 unnamed protein product [Nymphaea colorata]4.6e-0738.14Show/hide
Query:  RPSGPNSQRTPETFFANFCSDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRIPIWSTIPLTINPF----DPIPFGAHQVFDLMTSTYGHPESSNPS
        R   P+S  T   F+    S I+G   +GT A +LS  EF PQ ++ PP A W+ I       L  +P        P GA+ VFDL TST G P +S+P 
Subjt:  RPSGPNSQRTPETFFANFCSDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRIPIWSTIPLTINPF----DPIPFGAHQVFDLMTSTYGHPESSNPS

Query:  AIASISASVSTACDPNAA
        AI+    S + AC P  A
Subjt:  AIASISASVSTACDPNAA

VVV81879.1 unnamed protein product [Nymphaea colorata]4.4e-0536.75Show/hide
Query:  FC--SDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRIPIWSTIPLTINPF-------------------DPIPFGAHQVFD--LMTSTYGHPESSN
        FC  S  IGHARIGT  A  S +EFHPQW  NPP+  W RI      P T NP                    D  P  A  +F    MT   G P+SS 
Subjt:  FC--SDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRIPIWSTIPLTINPF-------------------DPIPFGAHQVFD--LMTSTYGHPESSN

Query:  PSAIASISASVSTACDP
         +A ++ SA +  +  P
Subjt:  PSAIASISASVSTACDP

XP_038975727.1 spidroin-1-like [Phoenix dactylifera]3.2e-0842.2Show/hide
Query:  TPETFFANF----CSDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRIPIWSTIPLTI--NPFDPIPFGAHQVFDLMTSTYGHPESSNPSAIASISA
        TP + F +F    CS   GHA  GT    LS  EFHPQWL N P+A W RI I  T PLT   +P    P GA           G P  S+ +A A+ S 
Subjt:  TPETFFANF----CSDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRIPIWSTIPLTI--NPFDPIPFGAHQVFDLMTSTYGHPESSNPSAIASISA

Query:  SVSTACDPN
        + S  CDPN
Subjt:  SVSTACDPN

TrEMBL top hitse value%identityAlignment
A0A0S3SU27 Uncharacterized protein1.9e-0641.3Show/hide
Query:  SDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRIPIWSTIPLTINPFDPI----PFGAHQVFDLMTSTYGHPESSNPSAIASISASVST
        S+ IGH  IGT    LS  EFHPQWL NPP+  W RI  W    LTI+P        PFG   +F           +S  S ++ +SAS+ST
Subjt:  SDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRIPIWSTIPLTINPFDPI----PFGAHQVFDLMTSTYGHPESSNPSAIASISASVST

A0A2P5C7M8 Uncharacterized protein8.0e-0535.48Show/hide
Query:  TPETFFANFC----SDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRIPIW-----STIPLTINPFDPIPFGAHQVF------------DLMTSTYG
        TP  F  +      S  IGHA IGT    LS  EFHPQWL+NPP+    +I  W     +TIP+    F   PFG+                 L T    
Subjt:  TPETFFANFC----SDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRIPIW-----STIPLTINPFDPIPFGAHQVF------------DLMTSTYG

Query:  HPESSNPSAIASISASVSTACDPN
            SNP A  S S+SV+    PN
Subjt:  HPESSNPSAIASISASVSTACDPN

A0A5K0YDP1 Uncharacterized protein2.3e-0738.14Show/hide
Query:  RPSGPNSQRTPETFFANFCSDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRIPIWSTIPLTINPF----DPIPFGAHQVFDLMTSTYGHPESSNPS
        R   P+S  T   F+    S I+G   +GT A +LS  EF PQ ++ PP A W+ I       L  +P        P GA+ VFDL TST G P +S+P 
Subjt:  RPSGPNSQRTPETFFANFCSDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRIPIWSTIPLTINPF----DPIPFGAHQVFDLMTSTYGHPESSNPS

Query:  AIASISASVSTACDPNAA
        AI+    S + AC P  A
Subjt:  AIASISASVSTACDPNAA

A0A5K0YXD4 Uncharacterized protein2.1e-0536.75Show/hide
Query:  FC--SDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRIPIWSTIPLTINPF-------------------DPIPFGAHQVFD--LMTSTYGHPESSN
        FC  S  IGHARIGT  A  S +EFHPQW  NPP+  W RI      P T NP                    D  P  A  +F    MT   G P+SS 
Subjt:  FC--SDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRIPIWSTIPLTINPF-------------------DPIPFGAHQVFD--LMTSTYGHPESSN

Query:  PSAIASISASVSTACDP
         +A ++ SA +  +  P
Subjt:  PSAIASISASVSTACDP

A0A5K1BR22 Uncharacterized protein2.9e-0736.52Show/hide
Query:  PNSQRTPETFFANFCSDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRI-----PIWSTIPLTINPFDPIPFGAHQVFDLMTSTYGHPESSNPSAIA
        P  + +   F    CS + G   +GT A +LS+ EF PQ ++ PP A W++I       + +IPL        P GA   FDL TST G P +S+P AI+
Subjt:  PNSQRTPETFFANFCSDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRI-----PIWSTIPLTINPFDPIPFGAHQVFDLMTSTYGHPESSNPSAIA

Query:  SISASVSTACDPNAA
              + ACDP  A
Subjt:  SISASVSTACDPNAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGCGCTCAGAGACCCTCGGGTCCAAATTCCCAACGTACACCCGAGACATTTTTTGCCAACTTCTGCTCCGACATCATTGGCCACGCCAGAATCGGCACCGCCGCCGCCAA
ACTCTCCATTATCGAGTTCCACCCGCAGTGGCTCAGAAACCCCCCGATTGCGCTGTGGAATAGAATCCCGATTTGGTCCACCATCCCCCTCACAATCAACCCGTTTGACC
CAATTCCTTTTGGTGCACACCAAGTGTTCGACCTAATGACTAGCACATACGGTCACCCGGAATCCTCCAATCCAAGCGCCATCGCCTCCATCTCGGCGTCCGTCAGCACC
GCCTGTGACCCGAACGCTGCATAG
mRNA sequenceShow/hide mRNA sequence
CGCGCTCAGAGACCCTCGGGTCCAAATTCCCAACGTACACCCGAGACATTTTTTGCCAACTTCTGCTCCGACATCATTGGCCACGCCAGAATCGGCACCGCCGCCGCCAA
ACTCTCCATTATCGAGTTCCACCCGCAGTGGCTCAGAAACCCCCCGATTGCGCTGTGGAATAGAATCCCGATTTGGTCCACCATCCCCCTCACAATCAACCCGTTTGACC
CAATTCCTTTTGGTGCACACCAAGTGTTCGACCTAATGACTAGCACATACGGTCACCCGGAATCCTCCAATCCAAGCGCCATCGCCTCCATCTCGGCGTCCGTCAGCACC
GCCTGTGACCCGAACGCTGCATAG
Protein sequenceShow/hide protein sequence
RAQRPSGPNSQRTPETFFANFCSDIIGHARIGTAAAKLSIIEFHPQWLRNPPIALWNRIPIWSTIPLTINPFDPIPFGAHQVFDLMTSTYGHPESSNPSAIASISASVST
ACDPNAA