; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G016660 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G016660
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionpre-rRNA-processing protein TSR2 homolog
Genome locationCmo_Chr01:12608558..12612934
RNA-Seq ExpressionCmoCh01G016660
SyntenyCmoCh01G016660
Gene Ontology termsGO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR019398 - Pre-rRNA-processing protein TSR2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608259.1 Pre-rRNA-processing protein TSR2-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.1e-12796.43Show/hide
Query:  MRSTRLTDLLQLFSESNRSSLFDRPSPSISFTALNFIEGFTLGGGEMDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSD
        MRSTRLTDLLQLFSESNRSSLFDRPSPSISFTA+NFIEGFTL GGEMDG GNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSD
Subjt:  MRSTRLTDLLQLFSESNRSSLFDRPSPSISFTALNFIEGFTLGGGEMDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSD

Query:  IFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIFMHEECVDGNFSSIERLRQSPLPR-GAHSHVSQAMSDDEEEEEEDDDDDGGNGGD
        IFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIFMHEECVDGNFSSIERLRQSPLPR GAHSHVSQAMSDDEEEEE+DDDDDGGNG D
Subjt:  IFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIFMHEECVDGNFSSIERLRQSPLPR-GAHSHVSQAMSDDEEEEEEDDDDDGGNGGD

Query:  GMRNDMMVDAI--QQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRSSRGTRN
        GMRNDMMVDAI  QQQQQPRAVNQPRRPEAS+PAEDGWVQVTSRRSSRGTRN
Subjt:  GMRNDMMVDAI--QQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRSSRGTRN

XP_022940503.1 pre-rRNA-processing protein TSR2 homolog [Cucurbita moschata]1.7e-107100Show/hide
Query:  MDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
        MDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
Subjt:  MDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF

Query:  MHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRSSRG
        MHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRSSRG
Subjt:  MHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRSSRG

Query:  TRN
        TRN
Subjt:  TRN

XP_022975934.1 pre-rRNA-processing protein TSR2 homolog [Cucurbita maxima]3.4e-7680.39Show/hide
Query:  MDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
        M+G  NRLLPA A P FQEGIGLVLSRWSALQLAV+NEWGGRDSRRKVELLCSDI TWFTQNKE LYIDDLEMILDE +LSLNTQVDDGSIEEVAE+LI 
Subjt:  MDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF

Query:  MHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDD-DGGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRSSR
        MHEEC+DGNFSSIE+LRQSPLP+ A SHVSQ MSDDEEE+EE+  D D GNG    R DMMVDAI    QPR VNQP  PEA+A AEDGWVQVTSRR SR
Subjt:  MHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDD-DGGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRSSR

Query:  GTRN
        GTRN
Subjt:  GTRN

XP_022982103.1 pre-rRNA-processing protein TSR2 homolog [Cucurbita maxima]5.5e-9893.69Show/hide
Query:  MDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
        M+G GNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
Subjt:  MDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF

Query:  MHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDG---GNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRS
        MHEECVDGNFSSI RLRQSPLPRGAHSHVSQAMSD+EEEEEEDDDDD    GNG DGMRNDMMVDAI  QQQPRAVNQ  RPEASAPAEDGWVQVTSRRS
Subjt:  MHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDG---GNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRS

Query:  SRGTRN
        SRGTRN
Subjt:  SRGTRN

XP_023524387.1 pre-rRNA-processing protein TSR2 homolog [Cucurbita pepo subsp. pepo]4.9e-9996.08Show/hide
Query:  MDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
        M+G GNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
Subjt:  MDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF

Query:  MHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAI-QQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRSSR
        MHEECVDGNFSSIERLRQSPL RGAHSHVSQAMSDD  EEEEDDDDDGGNG DGMRNDMMVDAI QQQQQPRAVNQP RPEASAPAEDGWVQVTSRRSSR
Subjt:  MHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAI-QQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRSSR

Query:  GTRN
        GTRN
Subjt:  GTRN

TrEMBL top hitse value%identityAlignment
A0A5D3E598 Pre-rRNA-processing protein TSR28.3e-7676.85Show/hide
Query:  MDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
        M+G GNRLLPADAFPLFQEGIGLVLSRWSALQLAV+NEWGGRDSRRKVELLCSDIFTWF QNKE LYIDDLE ILDE MLSLNTQVDDGSIEEVAE+LIF
Subjt:  MDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF

Query:  MHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRSSRG
        MHEECVD NFSSIERLRQSP P+ AH+HV+QA SDD+++++ ++D +        RNDMMVDA+Q  Q  R VN    PEA+A AEDGWVQVTSRR +RG
Subjt:  MHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRSSRG

Query:  TRN
        TRN
Subjt:  TRN

A0A6J1F8A7 pre-rRNA-processing protein TSR2 homolog3.7e-7679.51Show/hide
Query:  MDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
        M+G  NRLLPA A PLFQEGIGLVLSRWSALQLAV+NEWGGRDSRRKVELLCSDI TWFTQNKE LYIDDLEMILDE +LSLNTQVDDGSIEEVAE+LI 
Subjt:  MDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF

Query:  MHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDD--GGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRSS
        MHEEC+DGNFSSIE+LRQSPLPR A SHVSQ MSDD+EEE+E++  D   GNG    R DMMVDAI    QP  VNQP  PEA+A AEDGWVQVTSRR S
Subjt:  MHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDD--GGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRSS

Query:  RGTRN
        RGTRN
Subjt:  RGTRN

A0A6J1FPH6 pre-rRNA-processing protein TSR2 homolog8.2e-108100Show/hide
Query:  MDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
        MDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
Subjt:  MDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF

Query:  MHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRSSRG
        MHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRSSRG
Subjt:  MHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRSSRG

Query:  TRN
        TRN
Subjt:  TRN

A0A6J1IM14 pre-rRNA-processing protein TSR2 homolog1.7e-7680.39Show/hide
Query:  MDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
        M+G  NRLLPA A P FQEGIGLVLSRWSALQLAV+NEWGGRDSRRKVELLCSDI TWFTQNKE LYIDDLEMILDE +LSLNTQVDDGSIEEVAE+LI 
Subjt:  MDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF

Query:  MHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDD-DGGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRSSR
        MHEEC+DGNFSSIE+LRQSPLP+ A SHVSQ MSDDEEE+EE+  D D GNG    R DMMVDAI    QPR VNQP  PEA+A AEDGWVQVTSRR SR
Subjt:  MHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDD-DGGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRSSR

Query:  GTRN
        GTRN
Subjt:  GTRN

A0A6J1J400 pre-rRNA-processing protein TSR2 homolog2.6e-9893.69Show/hide
Query:  MDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
        M+G GNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF
Subjt:  MDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIF

Query:  MHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDG---GNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRS
        MHEECVDGNFSSI RLRQSPLPRGAHSHVSQAMSD+EEEEEEDDDDD    GNG DGMRNDMMVDAI  QQQPRAVNQ  RPEASAPAEDGWVQVTSRRS
Subjt:  MHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDG---GNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRS

Query:  SRGTRN
        SRGTRN
Subjt:  SRGTRN

SwissProt top hitse value%identityAlignment
Q06672 Pre-rRNA-processing protein TSR23.5e-0725.47Show/hide
Query:  FQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETML-----SLNTQVDDGSIEEVAEKLIFMHEECVDGNFS
        F+ G+ +V+ +W AL +AV+N WGG DS  K + +   +   F   K    +D    +++ET+L        T V+D S   +A ++I ++ +C + N++
Subjt:  FQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETML-----SLNTQVDDGSIEEVAEKLIFMHEECVDGNFS

Query:  SIER--LRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAIQQQQQP
         +E+  L      R   S     +  D++E++ED +D      D   ++++ D +  + +P
Subjt:  SIER--LRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAIQQQQQP

Q3KPN2 Pre-rRNA-processing protein TSR2 homolog1.3e-0624.73Show/hide
Query:  DAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIFMHEECVDGNFS
        D+  LF+E    VL  W  LQ+AV+N +GG  S+ K E +   I  +F+ N +    +  + I+       +T V+DGS   VA++L  +  +C  G  +
Subjt:  DAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIFMHEECVDGNFS

Query:  SIE-RLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRR
        +++ ++ Q    +       Q ++  ++EEE  DD++     +         ++     P +   P++ E   P +DGW  V  ++
Subjt:  SIE-RLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRR

Q3KRG3 Pre-rRNA-processing protein TSR2 homolog5.3e-1128.72Show/hide
Query:  LFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLS-LNTQVDDGSIEEVAEKLIFMHEECVDGNFSSIE
        +F E +  VL  W  LQ+AVDN +GG  S++K E +   +  +FT N + L  D++E  + E M +  +T VDDGS+ +VA+++  M ++C  G  + + 
Subjt:  LFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLS-LNTQVDDGSIEEVAEKLIFMHEECVDGNFSSIE

Query:  ----RLRQSPLPRG-AHSHVSQA-MSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRR
            +L Q     G A +  +Q    DD+++EEE  D +GG+ G  + +  + D   ++++                +DGW  V  ++
Subjt:  ----RLRQSPLPRG-AHSHVSQA-MSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRR

Q3T090 Pre-rRNA-processing protein TSR2 homolog1.1e-0525.27Show/hide
Query:  DAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLS-LNTQVDDGSIEEVAEKLIFMHEECVDGNF
        D+  LF   +   L  W ALQ+AV+N +GG  S+ K E L   +  +F +N + L +D++E  L E M++  +T V+DGS+ +V+++L  M      G+ 
Subjt:  DAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLS-LNTQVDDGSIEEVAEKLIFMHEECVDGNF

Query:  SSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRR
        ++++ +      R      +   +  E +E++D +           +    D +  Q +P   +     E     EDGW  V  ++
Subjt:  SSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRR

Q969E8 Pre-rRNA-processing protein TSR2 homolog6.0e-0727.81Show/hide
Query:  DAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLS-LNTQVDDGSIEEVAEKLIFMHEECVDGNF
        DA  LF+ G+   L  W ALQ+AV+N +GG  S+ K + L   +  +F +N + L +D++E  L E + +  +T V+DGS+ +V+++L  M      G+ 
Subjt:  DAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDETMLS-LNTQVDDGSIEEVAEKLIFMHEECVDGNF

Query:  SSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRND-MMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRR
        +++  +      R      +   +  E +E+EDD D          ND    D +  Q +P   +     E     EDGW  V  ++
Subjt:  SSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRND-MMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRR

Arabidopsis top hitse value%identityAlignment
AT3G22510.1 Pre-rRNA-processing protein TSR2, conserved region1.0e-1744Show/hide
Query:  PADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDET-MLSLNTQVDDGSIEEVAEKLIFMHEECVDG
        P D   + Q  IG +LSRW  LQ+AV N+WGG DS +K + L  ++F   +Q+   + ++++E +L E+ +LS NT+++DGSIEEVAE+L+ +HEE + G
Subjt:  PADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLYIDDLEMILDET-MLSLNTQVDDGSIEEVAEKLIFMHEECVDG

AT5G27990.1 Pre-rRNA-processing protein TSR2, conserved region1.5e-2939.2Show/hide
Query:  NRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLY-IDDLEMILDETMLSLNTQVDDGSIEEVAEKLIFMHEE
        N  L  +A  + +EGIGL+L RW+A++ AV+N WGGRDS+ K     + +F +F Q+K+ +  I+ L  +LD+ +  LNT  +DGS++EVA  L+ ++E+
Subjt:  NRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKETLY-IDDLEMILDETMLSLNTQVDDGSIEEVAEKLIFMHEE

Query:  CVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRSSRGTRN
        C +GN+  +E LR +     A S V  +  DDEE ++EDDD            DMMVDA  Q+Q+   V++P        A+DGW  V+SR+ ++G RN
Subjt:  CVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAIQQQQQPRAVNQPRRPEASAPAEDGWVQVTSRRSSRGTRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATCTACAAGGCTCACCGATCTCCTGCAACTGTTCTCTGAATCCAATCGCAGCTCTCTCTTTGATCGTCCCTCGCCTTCAATTTCGTTCACGGCTCTCAATTTCAT
CGAGGGTTTTACGCTCGGAGGTGGAGAGATGGACGGTAGCGGAAATCGCCTTCTCCCAGCTGATGCTTTTCCATTGTTCCAGGAAGGTATCGGGTTGGTTTTATCTCGTT
GGTCAGCTCTTCAGTTGGCGGTGGACAATGAGTGGGGTGGTCGCGACTCTCGTCGTAAAGTTGAACTATTGTGCTCTGATATTTTCACATGGTTTACTCAGAACAAAGAG
ACACTATATATCGATGACTTAGAAATGATTCTTGATGAAACTATGCTTTCGTTGAACACTCAGGTTGATGATGGTAGCATTGAGGAGGTAGCTGAAAAATTGATTTTCAT
GCATGAGGAGTGTGTGGATGGTAACTTTAGCTCTATCGAAAGGTTAAGACAATCCCCTCTTCCACGAGGTGCTCATTCTCATGTTAGTCAGGCTATGAGTGATGATGAAG
AAGAAGAAGAAGAAGATGATGATGATGATGGTGGAAATGGAGGCGATGGAATGAGAAATGATATGATGGTGGATGCCATACAACAACAACAACAACCCAGGGCTGTCAAT
CAGCCCCGGCGTCCAGAGGCCTCAGCTCCAGCTGAAGATGGATGGGTTCAAGTCACATCAAGAAGAAGTAGTAGGGGTACAAGAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGATCTACAAGGCTCACCGATCTCCTGCAACTGTTCTCTGAATCCAATCGCAGCTCTCTCTTTGATCGTCCCTCGCCTTCAATTTCGTTCACGGCTCTCAATTTCAT
CGAGGGTTTTACGCTCGGAGGTGGAGAGATGGACGGTAGCGGAAATCGCCTTCTCCCAGCTGATGCTTTTCCATTGTTCCAGGAAGGTATCGGGTTGGTTTTATCTCGTT
GGTCAGCTCTTCAGTTGGCGGTGGACAATGAGTGGGGTGGTCGCGACTCTCGTCGTAAAGTTGAACTATTGTGCTCTGATATTTTCACATGGTTTACTCAGAACAAAGAG
ACACTATATATCGATGACTTAGAAATGATTCTTGATGAAACTATGCTTTCGTTGAACACTCAGGTTGATGATGGTAGCATTGAGGAGGTAGCTGAAAAATTGATTTTCAT
GCATGAGGAGTGTGTGGATGGTAACTTTAGCTCTATCGAAAGGTTAAGACAATCCCCTCTTCCACGAGGTGCTCATTCTCATGTTAGTCAGGCTATGAGTGATGATGAAG
AAGAAGAAGAAGAAGATGATGATGATGATGGTGGAAATGGAGGCGATGGAATGAGAAATGATATGATGGTGGATGCCATACAACAACAACAACAACCCAGGGCTGTCAAT
CAGCCCCGGCGTCCAGAGGCCTCAGCTCCAGCTGAAGATGGATGGGTTCAAGTCACATCAAGAAGAAGTAGTAGGGGTACAAGAAATTAGTCCCAACCTCTCTCAAATTA
ATCCATTTTACTGCCCACTACCCATCAATTTTGTTTGGTGTGAAGATATATATATATAACATATTAGAATTCAGCTTGTGTTTTTGGAGATATCACAGGAGTATGCCATT
GTTTTCGATTATCGTTTTGTTGATTACTTCTATACGTTCATCGAGTTTGGTAGTTAGATCGAGTAGCTGCATTCTTTAGTAACGTCCCGACACAGGGTTGACTTTATTAG
AAGAACAAAAGGATTTTAGTCGGTAGATTGATGCCCATTTGAATTTTGGGTTCTTTCTTTTATTATAG
Protein sequenceShow/hide protein sequence
MRSTRLTDLLQLFSESNRSSLFDRPSPSISFTALNFIEGFTLGGGEMDGSGNRLLPADAFPLFQEGIGLVLSRWSALQLAVDNEWGGRDSRRKVELLCSDIFTWFTQNKE
TLYIDDLEMILDETMLSLNTQVDDGSIEEVAEKLIFMHEECVDGNFSSIERLRQSPLPRGAHSHVSQAMSDDEEEEEEDDDDDGGNGGDGMRNDMMVDAIQQQQQPRAVN
QPRRPEASAPAEDGWVQVTSRRSSRGTRN