; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G016670 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G016670
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSKI/DACH domain-containing protein 1
Genome locationCmo_Chr01:12613274..12613753
RNA-Seq ExpressionCmoCh01G016670
SyntenyCmoCh01G016670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608260.1 hypothetical protein SDJN03_01602, partial [Cucurbita argyrosperma subsp. sororia]4.9e-7696.86Show/hide
Query:  MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKATASSIYKKS
        MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQIL+ATTSSRKISDSLSSSSSDS SYYSSVSSCSSCSSPNR YDKATASS+YKKS
Subjt:  MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKATASSIYKKS

Query:  RSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG
        RSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMEL+EALMHSRSSAVVQGNVHG
Subjt:  RSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG

XP_022940504.1 uncharacterized protein LOC111446076 [Cucurbita moschata]2.8e-79100Show/hide
Query:  MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKATASSIYKKS
        MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKATASSIYKKS
Subjt:  MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKATASSIYKKS

Query:  RSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG
        RSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG
Subjt:  RSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG

XP_022975755.1 uncharacterized protein LOC111476165 [Cucurbita maxima]1.8e-4671.43Show/hide
Query:  MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKAT--------
        MAN HKSKSDYDD RR      CKRHPKH QSPGVCSLCL EKLSQI+SA TSSRK+SDSLSSS S   SYYSS SSCSSCSSPN PY   T        
Subjt:  MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKAT--------

Query:  -ASSIYKKSRSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG
         ASSI+KKSRSMAFA R +R T+SDSGK S+LGFWSRFL RPRRK ME EE LMHSR+  VVQ +VHG
Subjt:  -ASSIYKKSRSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG

XP_022981929.1 uncharacterized protein LOC111480927 [Cucurbita maxima]7.3e-7294.97Show/hide
Query:  MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKATASSIYKKS
        MANLHKSKSDYDDLRR RRC CCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRK SDSLSSSSSDS SYYSSVSSCSSCSSPNRPYDKATASSIYKKS
Subjt:  MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKATASSIYKKS

Query:  RSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG
        RS+AFA RFRRG DSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSR+SAVVQGNVHG
Subjt:  RSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG

XP_023524412.1 uncharacterized protein LOC111788316 [Cucurbita pepo subsp. pepo]6.8e-7898.74Show/hide
Query:  MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKATASSIYKKS
        MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDS SYYSSVSSCSSCSSPNRPYDKATASSIYKKS
Subjt:  MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKATASSIYKKS

Query:  RSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG
        RSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSR+SAVVQGNVHG
Subjt:  RSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG

TrEMBL top hitse value%identityAlignment
A0A1S3CQP1 SKI/DACH domain-containing protein 11.6e-3259.78Show/hide
Query:  MANLHKSKSDYD----DLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSR-KISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYD------
        MAN H SKSDYD      RRHR    CK HP H QSPGVCSLCLTEKLS+ILS   SSR KIS SLSSS S SY Y S  SS SSCSS  +PY+      
Subjt:  MANLHKSKSDYD----DLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSR-KISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYD------

Query:  -----KA----TASSIYKKSRSMAFASRFRRG--TDSDSGKKSH---LGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG
             KA    +ASSI+KKS+SMA   R +RG  T+SD GKKS+   LGFWSRFLNRPR KRME ++ LM SR+  VV  NVHG
Subjt:  -----KA----TASSIYKKSRSMAFASRFRRG--TDSDSGKKSH---LGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG

A0A6J1FD38 uncharacterized protein LOC1114430181.3e-4569.64Show/hide
Query:  MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKAT--------
        MAN H+SKSDYDD RR      CKRHPKH QSPGVCSLCL EKLSQI+S T SSRK+SDSLSSS S   SYYSS SSCSSCSSPN PY   T        
Subjt:  MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKAT--------

Query:  -ASSIYKKSRSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG
         ASSI+KKSRSMAFA R RRGT+SDSGK ++LGFWS+ L RPRRK ME EE LMHSR+  VVQ +VHG
Subjt:  -ASSIYKKSRSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG

A0A6J1FKF2 uncharacterized protein LOC1114460761.3e-79100Show/hide
Query:  MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKATASSIYKKS
        MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKATASSIYKKS
Subjt:  MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKATASSIYKKS

Query:  RSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG
        RSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG
Subjt:  RSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG

A0A6J1IHL9 uncharacterized protein LOC1114761658.8e-4771.43Show/hide
Query:  MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKAT--------
        MAN HKSKSDYDD RR      CKRHPKH QSPGVCSLCL EKLSQI+SA TSSRK+SDSLSSS S   SYYSS SSCSSCSSPN PY   T        
Subjt:  MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKAT--------

Query:  -ASSIYKKSRSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG
         ASSI+KKSRSMAFA R +R T+SDSGK S+LGFWSRFL RPRRK ME EE LMHSR+  VVQ +VHG
Subjt:  -ASSIYKKSRSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG

A0A6J1J366 uncharacterized protein LOC1114809273.5e-7294.97Show/hide
Query:  MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKATASSIYKKS
        MANLHKSKSDYDDLRR RRC CCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRK SDSLSSSSSDS SYYSSVSSCSSCSSPNRPYDKATASSIYKKS
Subjt:  MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKATASSIYKKS

Query:  RSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG
        RS+AFA RFRRG DSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSR+SAVVQGNVHG
Subjt:  RSMAFASRFRRGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22470.1 unknown protein8.8e-0742.72Show/hide
Query:  CKRHPKHRQSPGVCSLCLTEKLSQILS---------ATTSSRKISDSLSSSSSDSYSYYSSV------SSCSSCSSP-NRPYDKATASSIYKKS-RSMAF
        CK+HPKHRQSPG+CSLCL E LS++ S         +++S  K   S SS+SS+S S +SS       SS SSC SP    Y +   +   KK  +  +F
Subjt:  CKRHPKHRQSPGVCSLCLTEKLSQILS---------ATTSSRKISDSLSSSSSDSYSYYSSV------SSCSSCSSP-NRPYDKATASSIYKKS-RSMAF

Query:  ASR
         SR
Subjt:  ASR

AT1G35210.1 unknown protein2.7e-0857.81Show/hide
Query:  CKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSS--VSSCSSCSSP
        CK+HPKHRQSPGVCSLCL E+LS  + A +S R  S  + S+SS + S  SS   SS SSC SP
Subjt:  CKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSS--VSSCSSCSSP

AT1G72240.1 unknown protein8.8e-0752.17Show/hide
Query:  CKRHPKHRQSPGVCSLCLTEKLSQI-LSATTSSRKISDSLSSSSSDSYSYYSSVSSC------SSCSSP
        CK+H KHRQSPG+CSLCLTE+LS++ L     ++K  ++ +   S S S  SSVSSC      SSCSSP
Subjt:  CKRHPKHRQSPGVCSLCLTEKLSQI-LSATTSSRKISDSLSSSSSDSYSYYSSVSSC------SSCSSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACCTCCACAAATCCAAGTCCGATTACGACGATCTCCGCCGCCACCGCCGCTGCTGTTGCTGCAAACGGCATCCCAAGCACCGCCAATCTCCCGGCGTTTGCTC
CCTCTGTTTGACAGAAAAGCTCTCGCAAATCCTCTCCGCGACTACTTCATCGCGTAAAATCTCCGATTCTCTTTCTTCTTCTTCCTCCGATTCCTATTCTTATTACTCCT
CTGTTTCCTCTTGTTCTTCCTGTTCTTCGCCGAATCGGCCTTACGATAAGGCTACGGCGTCTTCGATCTATAAGAAGAGTAGATCGATGGCGTTTGCGTCGCGATTTAGA
CGAGGAACAGATAGCGATAGTGGAAAGAAGAGTCACCTAGGGTTTTGGTCGAGGTTTCTGAATCGGCCGAGACGGAAGAGAATGGAATTGGAGGAGGCTTTGATGCACTC
CAGATCAAGCGCCGTGGTGCAGGGGAACGTGCATGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAACCTCCACAAATCCAAGTCCGATTACGACGATCTCCGCCGCCACCGCCGCTGCTGTTGCTGCAAACGGCATCCCAAGCACCGCCAATCTCCCGGCGTTTGCTC
CCTCTGTTTGACAGAAAAGCTCTCGCAAATCCTCTCCGCGACTACTTCATCGCGTAAAATCTCCGATTCTCTTTCTTCTTCTTCCTCCGATTCCTATTCTTATTACTCCT
CTGTTTCCTCTTGTTCTTCCTGTTCTTCGCCGAATCGGCCTTACGATAAGGCTACGGCGTCTTCGATCTATAAGAAGAGTAGATCGATGGCGTTTGCGTCGCGATTTAGA
CGAGGAACAGATAGCGATAGTGGAAAGAAGAGTCACCTAGGGTTTTGGTCGAGGTTTCTGAATCGGCCGAGACGGAAGAGAATGGAATTGGAGGAGGCTTTGATGCACTC
CAGATCAAGCGCCGTGGTGCAGGGGAACGTGCATGGCTGA
Protein sequenceShow/hide protein sequence
MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDSLSSSSSDSYSYYSSVSSCSSCSSPNRPYDKATASSIYKKSRSMAFASRFR
RGTDSDSGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG