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CmoCh01G016680 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G016680
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description39S ribosomal protein L41-A, mitochondrial-like
Genome locationCmo_Chr01:12616153..12619563
RNA-Seq ExpressionCmoCh01G016680
SyntenyCmoCh01G016680
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR019189 - Ribosomal protein L27/L41, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608261.1 39S ribosomal protein L41-A, mitochondrial-like protein, partial [Cucurbita argyrosperma subsp. sororia]6.0e-3198.59Show/hide
Query:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI
        MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFK+
Subjt:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI

XP_015571444.1 39S ribosomal protein L41-A, mitochondrial-like [Ricinus communis]1.0e-3078.65Show/hide
Query:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKIFLKCQEKTTLLILTDATA
        MALGLILG+ R+ RRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDLTDFK+ L   +  T +  T+A+A
Subjt:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKIFLKCQEKTTLLILTDATA

XP_022940505.1 39S ribosomal protein L41-A, mitochondrial-like [Cucurbita moschata]6.0e-3198.59Show/hide
Query:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI
        MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFK+
Subjt:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI

XP_022982189.1 39S ribosomal protein L41-A, mitochondrial-like [Cucurbita maxima]6.0e-3198.59Show/hide
Query:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI
        MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFK+
Subjt:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI

XP_038897038.1 39S ribosomal protein L41-A, mitochondrial-like [Benincasa hispida]3.9e-3095.77Show/hide
Query:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI
        MALGLILGL R+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFK+
Subjt:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI

TrEMBL top hitse value%identityAlignment
A0A6J1CNE9 39S ribosomal protein L41-A, mitochondrial2.5e-3094.37Show/hide
Query:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI
        MALGLILGL R+MRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNY+VPDLTDFK+
Subjt:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI

A0A6J1FQT8 39S ribosomal protein L41-A, mitochondrial-like2.9e-3198.59Show/hide
Query:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI
        MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFK+
Subjt:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI

A0A6J1J3V5 39S ribosomal protein L41-A, mitochondrial-like2.9e-3198.59Show/hide
Query:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI
        MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFK+
Subjt:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI

A0A803LF52 Uncharacterized protein9.3e-3095.77Show/hide
Query:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI
        MALGLILGLARSMRRKRTSSLDILSSKRAPR+YYKGKNCKPTGFHTRKGGYVVV EKLPNYVVPDLTDFK+
Subjt:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI

B9RJQ0 Uncharacterized protein7.1e-3081.18Show/hide
Query:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKIF-----LKCQEKTT
        MALGLILG+ R+ RRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYV+VPEKLPNYVVPDLTDFK+      LK   +TT
Subjt:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKIF-----LKCQEKTT

SwissProt top hitse value%identityAlignment
Q5BJX1 39S ribosomal protein L41, mitochondrial4.5e-0546.81Show/hide
Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI
        +SKR PR + K +  K TGF+T +  +V + E +P +VVPDLT FK+
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI

Q6DJI4 39S ribosomal protein L41-A, mitochondrial1.5e-0540.58Show/hide
Query:  LGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI
        +GLI  +AR + R      +  +SK+ P  Y KG+  K  G+ T  G +V V E +P +VVPDLT FK+
Subjt:  LGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI

Q6INF3 39S ribosomal protein L41-B, mitochondrial2.6e-0540.58Show/hide
Query:  LGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI
        +GLI  +AR + R      +  +SK  P  Y KG+  K  G+ T  G +V V E +P +VVPDLT FK+
Subjt:  LGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI

Q9CQN7 39S ribosomal protein L41, mitochondrial4.5e-0544.68Show/hide
Query:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI
        +SKR PR + K +  K TG +T    +V + E +P +VVPDLT FK+
Subjt:  SSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI

Arabidopsis top hitse value%identityAlignment
AT4G09012.1 Mitochondrial ribosomal protein L276.2e-2677.46Show/hide
Query:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI
        M LGL+ G+ R+ RRKR SSLDILS KRAPRD+YKGKNCKP GFHTRK GYVV P+KLPNYVVPDLT FK+
Subjt:  MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI

AT5G39800.1 Mitochondrial ribosomal protein L271.3e-2882.35Show/hide
Query:  GLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI
        GL++G+ RS RRKR+SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNYVVPDLT FK+
Subjt:  GLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI

AT5G40080.1 Mitochondrial ribosomal protein L271.7e-2882.35Show/hide
Query:  GLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI
        GL++G+ RS RRKR SSLDILS KRAPRD+YKGKNCKPTGFHTRKGGYVV P+KLPNYVVPDLT FK+
Subjt:  GLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGGGGCTGATTTTGGGACTAGCAAGATCAATGAGGAGGAAGCGCACATCATCTTTGGACATTCTTTCGTCAAAACGAGCTCCACGAGATTACTACAAGGGAAA
AAATTGCAAACCTACTGGTTTTCATACGCGCAAAGGTGGATACGTTGTGGTGCCAGAGAAACTGCCTAACTATGTCGTCCCTGATTTGACTGATTTCAAGATATTCTTGA
AATGTCAAGAGAAGACAACATTGTTGATCTTGACGGATGCAACTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTGGGGCTGATTTTGGGACTAGCAAGATCAATGAGGAGGAAGCGCACATCATCTTTGGACATTCTTTCGTCAAAACGAGCTCCACGAGATTACTACAAGGGAAA
AAATTGCAAACCTACTGGTTTTCATACGCGCAAAGGTGGATACGTTGTGGTGCCAGAGAAACTGCCTAACTATGTCGTCCCTGATTTGACTGATTTCAAGATATTCTTGA
AATGTCAAGAGAAGACAACATTGTTGATCTTGACGGATGCAACTGCATAA
Protein sequenceShow/hide protein sequence
MALGLILGLARSMRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPNYVVPDLTDFKIFLKCQEKTTLLILTDATA