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CmoCh01G016770 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G016770
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiont-SNARE coiled-coil homology domain-containing protein
Genome locationCmo_Chr01:12655228..12658560
RNA-Seq ExpressionCmoCh01G016770
SyntenyCmoCh01G016770
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0015031 - protein transport (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030173 - integral component of Golgi membrane (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR039897 - BET1-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608268.1 Bet1-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2685.71Show/hide
Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNKTEIYKTYSWNKQ
        MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRN  +   T + ++Q
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNKTEIYKTYSWNKQ
XP_008466185.1 PREDICTED: bet1-like protein At1g29060 [Cucumis melo]1.0e-2379.22Show/hide
Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNKTEIYKTYSWNKQ
        MAS+S+RGGSSFYNGDAAP+RSREGLSTRPAAASDEIQLQIDPMQGDLDD+IVGLH QVKRLRN  +   T + ++Q
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNKTEIYKTYSWNKQ
XP_022935829.1 bet1-like protein At4g14600 [Cucurbita moschata]1.5e-2290.62Show/hide
Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRN
        MAS+S+RGGSSFYNG+AAPYRSREGLSTR AAASDEIQLQIDPMQGDLDD+IVGLH QVKRLRN
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRN
XP_022940948.1 bet1-like protein At1g29060 [Cucurbita moschata]2.9e-2685.71Show/hide
Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNKTEIYKTYSWNKQ
        MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRN  +   T + ++Q
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNKTEIYKTYSWNKQ
XP_022980898.1 bet1-like protein At1g29060 [Cucurbita maxima]6.5e-2684.42Show/hide
Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNKTEIYKTYSWNKQ
        MASNSYRGGSSFYNGDAAPYRSREGLSTRP+AASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRN  +   T + ++Q
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNKTEIYKTYSWNKQ
TrEMBL top hitse value%identityAlignment
A0A1S3CQM7 bet1-like protein At1g290605.0e-2479.22Show/hide
Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNKTEIYKTYSWNKQ
        MAS+S+RGGSSFYNGDAAP+RSREGLSTRPAAASDEIQLQIDPMQGDLDD+IVGLH QVKRLRN  +   T + ++Q
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNKTEIYKTYSWNKQ
A0A5A7TAQ3 Bet1-like protein5.0e-2479.22Show/hide
Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNKTEIYKTYSWNKQ
        MAS+S+RGGSSFYNGDAAP+RSREGLSTRPAAASDEIQLQIDPMQGDLDD+IVGLH QVKRLRN  +   T + ++Q
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNKTEIYKTYSWNKQ
A0A6J1FQQ6 bet1-like protein At1g290601.4e-2685.71Show/hide
Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNKTEIYKTYSWNKQ
        MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRN  +   T + ++Q
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNKTEIYKTYSWNKQ
A0A6J1IFD8 bet1-like protein At1g290607.2e-2390.62Show/hide
Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRN
        MAS+S+RGGSSFYNG+AAPYRSREGLSTR AAASDEIQLQIDPMQGDLDD+IVGLH QVKRLRN
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRN
A0A6J1J0M1 bet1-like protein At1g290603.1e-2684.42Show/hide
Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNKTEIYKTYSWNKQ
        MASNSYRGGSSFYNGDAAPYRSREGLSTRP+AASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRN  +   T + ++Q
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNKTEIYKTYSWNKQ
SwissProt top hitse value%identityAlignment
Q8L9S0 Bet1-like protein At1g290604.1e-1567.19Show/hide
Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRN
        MASN   GGS +  G A PYRSREGLSTR A+ S+EIQL+IDPM  DLDD+I+GLHGQV++L+N
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRN
Q8VXX9 Bet1-like protein At4g146003.7e-1669.7Show/hide
Query:  MASNSYRGGS--SFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRN
        MASN +R G+  S Y G AAPYRSREGLSTR AA S+EIQL+IDPM  DLDD+I GLHGQV++L+N
Subjt:  MASNSYRGGS--SFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRN
Arabidopsis top hitse value%identityAlignment
AT1G29060.1 Target SNARE coiled-coil domain protein2.9e-1667.19Show/hide
Query:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRN
        MASN   GGS +  G A PYRSREGLSTR A+ S+EIQL+IDPM  DLDD+I+GLHGQV++L+N
Subjt:  MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRN
AT4G14600.1 Target SNARE coiled-coil domain protein2.6e-1769.7Show/hide
Query:  MASNSYRGGS--SFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRN
        MASN +R G+  S Y G AAPYRSREGLSTR AA S+EIQL+IDPM  DLDD+I GLHGQV++L+N
Subjt:  MASNSYRGGS--SFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTAATTCGTATCGTGGCGGTAGTTCCTTCTACAACGGCGATGCCGCTCCTTATCGTTCCAGGGAGGGGCTTAGCACGAGACCGGCGGCTGCTTCCGATGAAAT
TCAACTACAGATCGATCCGATGCAAGGGGACTTGGACGACCAGATCGTTGGTCTCCATGGCCAGGTTAAAAGGCTGAGAAATAAAACCGAAATATATAAGACCTACAGCT
GGAACAAGCAGAAGCCATACATTTACAGAGTCTTCGTTATGGCAGTTCTAGTCTATTGGCTCGTCATCGTTCTAAACAAAGATTTGTTTCTAAACGTTGAGCTAAGCGTC
CTATTGTTGACAACATTGCTCAAGAAATTGGAACAGAAGCAAAATCCCAGCAAGATTTTCTAG
mRNA sequenceShow/hide mRNA sequence
AACGCCAACGCGTTAACGGGAGTCGGAAAAATCCCAATTTGCTTCGCGCTCTCACCTTCCGACTCAGATTGAAGATACTGAAATTGATTCTCGCTATTCGTCTCTTTCCG
ATCCAATTCTTTCCTTTTGGATTAGGTTTTCATTCTGTCTTCAATGGCGTCTAATTCGTATCGTGGCGGTAGTTCCTTCTACAACGGCGATGCCGCTCCTTATCGTTCCA
GGGAGGGGCTTAGCACGAGACCGGCGGCTGCTTCCGATGAAATTCAACTACAGATCGATCCGATGCAAGGGGACTTGGACGACCAGATCGTTGGTCTCCATGGCCAGGTT
AAAAGGCTGAGAAATAAAACCGAAATATATAAGACCTACAGCTGGAACAAGCAGAAGCCATACATTTACAGAGTCTTCGTTATGGCAGTTCTAGTCTATTGGCTCGTCAT
CGTTCTAAACAAAGATTTGTTTCTAAACGTTGAGCTAAGCGTCCTATTGTTGACAACATTGCTCAAGAAATTGGAACAGAAGCAAAATCCCAGCAAGATTTTCTAGATCA
GTTGCAAATGACGTTGATCAAAGCTCAAGCGGGAGTGAAGAACAACGTAAGAAGATTGAACAAAAAAATCATACAGAACGGATCAAATCATGTCGTCCAGGTCGTCGTAT
TTGCATTGATCTGTTTCTTTATAGTGTATATGTGGTCGAAAATATCCAGAAAATGAATGCTTCCCTACCAGTTGCTGGCCAGTGACGAAGGAAAAGAAACAGGAATGATG
TTTTAATATTATCACTCTCACTCATGGGGTAAGAAAATGGTGCAGTGAAAATAGGCCTTTTGTGTTTCTTTTTGTAGGGAACTCTTTGAGTATACACTTTTATACGTTGT
AAAGATCTGTATTGTTCATTTCAACTATAGTTTTCACCAATCAACTTATGCCGATGGGGTTTGTTTTGTGACTTTTAGGAGAGACAAACTGGGCCTTCTGTAGCGGTTTC
CAAGTAAGTCTCAAATGAGCATTACAAAGTTAGTTAATATATAAGATCGTTGGAAATGGTTTTTAATGAAAATAAGAATAGAAAATCATGGG
Protein sequenceShow/hide protein sequence
MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNKTEIYKTYSWNKQKPYIYRVFVMAVLVYWLVIVLNKDLFLNVELSV
LLLTTLLKKLEQKQNPSKIF