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CmoCh01G016790 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G016790
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr01:12669207..12669793
RNA-Seq ExpressionCmoCh01G016790
SyntenyCmoCh01G016790
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608270.1 Transport inhibitor response 1-like protein, partial [Cucurbita argyrosperma subsp. sororia]6.3e-3181.72Show/hide
Query:  DTLKSGLVAEDQSLYSSNCKLELLEEAWVVESCIKSLDTNYWSFYQLNQDRKALQGLEDQS---SMNISPTSRQRIASKGMTQVRVLQLYKKH
        + LK   V E    +  NCKLELLEEAWVVESCIKSLDTNYWSFYQLNQDRKALQGLEDQS   SMNISPTSRQRIASKGMTQV VLQLYKKH
Subjt:  DTLKSGLVAEDQSLYSSNCKLELLEEAWVVESCIKSLDTNYWSFYQLNQDRKALQGLEDQS---SMNISPTSRQRIASKGMTQVRVLQLYKKH
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTTCCTGACACTTTGAAGAGTGGTTTAGTTGCTGAGGATCAATCTCTTTACAGTTCTAACTGCAAACTAGAGCTGCTGGAGGAGGCATGGGTCGTAGAGAGCTG
CATTAAAAGCTTAGATACCAATTATTGGTCATTTTATCAATTGAATCAAGATAGAAAAGCATTGCAAGGTTTGGAGGATCAGTCATCTATGAATATCTCTCCAACCTCCA
GGCAGCGGATAGCTAGCAAGGGGATGACACAGGTACGCGTACTTCAGCTTTACAAGAAACATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCTTCCTGACACTTTGAAGAGTGGTTTAGTTGCTGAGGATCAATCTCTTTACAGTTCTAACTGCAAACTAGAGCTGCTGGAGGAGGCATGGGTCGTAGAGAGCTG
CATTAAAAGCTTAGATACCAATTATTGGTCATTTTATCAATTGAATCAAGATAGAAAAGCATTGCAAGGTTTGGAGGATCAGTCATCTATGAATATCTCTCCAACCTCCA
GGCAGCGGATAGCTAGCAAGGGGATGACACAGGTACGCGTACTTCAGCTTTACAAGAAACATTAGTCCATTTATTTTGATTCAAATGGTAAGAAGATGTGAGGATTGAAA
GACCCGGCCTCTTTAGCTAAATGTTGTTTATTTCTAAACAGGTGTATTAGTAGTGTAGGCCCCTGGTTATTGAGTTTACTATTGTTATTTATCAGAAAATGTGAGATGGA
TGGGTAATAAATGCCAAAATTATGCATGGACAGAATTTCCATAGAATAATGGTACTGTCTCTGATTTTTTTTTCC
Protein sequenceShow/hide protein sequence
MELPDTLKSGLVAEDQSLYSSNCKLELLEEAWVVESCIKSLDTNYWSFYQLNQDRKALQGLEDQSSMNISPTSRQRIASKGMTQVRVLQLYKKH