; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G017600 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G017600
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCRG16
Genome locationCmo_Chr01:13080274..13080827
RNA-Seq ExpressionCmoCh01G017600
SyntenyCmoCh01G017600
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591454.1 hypothetical protein SDJN03_13800, partial [Cucurbita argyrosperma subsp. sororia]3.8e-1389.47Show/hide
Query:  MAAVSNASFMALVAVLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVAL
        MAAVS  SFMALVAVLF V+S+AVAQSAESPAPAPASPATSVVPSLS ACVGAFVAL
Subjt:  MAAVSNASFMALVAVLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVAL
KAG6598305.1 hypothetical protein SDJN03_08083, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0461.4Show/hide
Query:  MAAVSNASFMALVAVLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVAL
        MA VS AS +AL+A++FAV S+A   + E+PAP+PASPATS+ PS   ACV AFVAL
Subjt:  MAAVSNASFMALVAVLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVAL
KAG7024335.1 hypothetical protein SDJN02_13149, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-1389.47Show/hide
Query:  MAAVSNASFMALVAVLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVAL
        MAAVS  SFMALVAVLF V+S+AVAQSAESPAPAPASPATSVVPSLS ACVGAFVAL
Subjt:  MAAVSNASFMALVAVLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVAL
KGN55315.1 hypothetical protein Csa_012200 [Cucumis sativus]2.9e-1389.47Show/hide
Query:  MAAVSNASFMALVAVLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVAL
        MAAVS  SFMALVAVLFAVLS+AVAQSAESPAP PASPA SVVPSLSFACVGAF+AL
Subjt:  MAAVSNASFMALVAVLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVAL
TrEMBL top hitse value%identityAlignment
Q96504 CRG161.4e-1389.47Show/hide
Query:  MAAVSNASFMALVAVLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVAL
        MAAVS  SFMALVAVLFAVLS+AVAQSAESPAP PASPA SVVPSLSFACVGAF+AL
Subjt:  MAAVSNASFMALVAVLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVAL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGTCTCCAACGCTTCCTTCATGGCTCTTGTGGCTGTTCTGTTCGCTGTACTCTCCATTGCCGTTGCGCAATCTGCTGAGTCTCCTGCTCCGGCACCGGCTTC
TCCGGCTACCTCTGTCGTGCCGTCGTTGAGCTTTGCTTGCGTTGGTGCCTTCGTTGCTCTCTGTGTAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCGTCTCCAACGCTTCCTTCATGGCTCTTGTGGCTGTTCTGTTCGCTGTACTCTCCATTGCCGTTGCGCAATCTGCTGAGTCTCCTGCTCCGGCACCGGCTTC
TCCGGCTACCTCTGTCGTGCCGTCGTTGAGCTTTGCTTGCGTTGGTGCCTTCGTTGCTCTCTGTGTAAAGTAG
Protein sequenceShow/hide protein sequence
MAAVSNASFMALVAVLFAVLSIAVAQSAESPAPAPASPATSVVPSLSFACVGAFVALCVK