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CmoCh01G017870 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G017870
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionMethyltransf_12 domain-containing protein
Genome locationCmo_Chr01:13186619..13189136
RNA-Seq ExpressionCmoCh01G017870
SyntenyCmoCh01G017870
Gene Ontology termsGO:0030488 - tRNA methylation (biological process)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142813.1 uncharacterized protein LOC111012843 isoform X1 [Momordica charantia]4.9e-0477.78Show/hide
Query:  ISSSK--DTECALILCHVLRRVDEPTIVSAAKRFGF
        I+SSK  D+E ALILCHVLRRVDEPTIVS+A +FGF
Subjt:  ISSSK--DTECALILCHVLRRVDEPTIVSAAKRFGF

XP_022142813.1 uncharacterized protein LOC111012843 isoform X1 [Momordica charantia]9.6e-0888.24Show/hide
Query:  ISSSKDTECALILCHVLRRVDEPTIVSAAKRFGF
        ISSSKD+ECALILCHVLRRVDEPTI+SAA++FGF
Subjt:  ISSSKDTECALILCHVLRRVDEPTIVSAAKRFGF

XP_022142829.1 uncharacterized protein LOC111012843 isoform X2 [Momordica charantia]8.7e-0964.29Show/hide
Query:  RTHKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL
        +THKDFNES +AAFVCDLTADNL NH+ PSSI         + VSPEKMSQV  N+
Subjt:  RTHKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL

XP_022142829.1 uncharacterized protein LOC111012843 isoform X2 [Momordica charantia]4.9e-0477.78Show/hide
Query:  ISSSK--DTECALILCHVLRRVDEPTIVSAAKRFGF
        I+SSK  D+E ALILCHVLRRVDEPTIVS+A +FGF
Subjt:  ISSSK--DTECALILCHVLRRVDEPTIVSAAKRFGF

XP_022142829.1 uncharacterized protein LOC111012843 isoform X2 [Momordica charantia]8.7e-0964.29Show/hide
Query:  RTHKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL
        +THKDFNES +AAFVCDLTADNL NH+ PSSI         + VSPEKMSQV  N+
Subjt:  RTHKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL

XP_023535746.1 uncharacterized protein LOC111797082 isoform X1 [Cucurbita pepo subsp. pepo]4.5e-0555.36Show/hide
Query:  RTHKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL
        + HKDFN+  VAAFVCDLTAD+L N+I PSS+         + VSPEKMS V  N+
Subjt:  RTHKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL

XP_023535746.1 uncharacterized protein LOC111797082 isoform X1 [Cucurbita pepo subsp. pepo]2.8e-0762.5Show/hide
Query:  RTHKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL
        +THKDFNES VAAFVCDLTAD++ NHI PSSI         + VSPEKMS V  N+
Subjt:  RTHKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL

XP_023535747.1 uncharacterized protein LOC111797082 isoform X2 [Cucurbita pepo subsp. pepo]4.5e-0555.36Show/hide
Query:  RTHKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL
        + HKDFN+  VAAFVCDLTAD+L N+I PSS+         + VSPEKMS V  N+
Subjt:  RTHKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL

XP_023535747.1 uncharacterized protein LOC111797082 isoform X2 [Cucurbita pepo subsp. pepo]9.6e-0888.24Show/hide
Query:  ISSSKDTECALILCHVLRRVDEPTIVSAAKRFGF
        ISSSKD+ECALILCHVLRRVDEPTI+SAA++FGF
Subjt:  ISSSKDTECALILCHVLRRVDEPTIVSAAKRFGF

XP_031740733.1 uncharacterized protein LOC101211005 isoform X1 [Cucumis sativus]2.0e-0582.35Show/hide
Query:  ISSSKDTECALILCHVLRRVDEPTIVSAAKRFGF
        ISSSKD+E ALI CHVLRRVDEPTIVS A +FGF
Subjt:  ISSSKDTECALILCHVLRRVDEPTIVSAAKRFGF

TrEMBL top hitse value%identityAlignment
A0A0A0L0R5 Methyltransf_12 domain-containing protein9.7e-0682.35Show/hide
Query:  ISSSKDTECALILCHVLRRVDEPTIVSAAKRFGF
        ISSSKD+E ALI CHVLRRVDEPTIVS A +FGF
Subjt:  ISSSKDTECALILCHVLRRVDEPTIVSAAKRFGF

A0A0A0L0R5 Methyltransf_12 domain-containing protein1.8e-0763.64Show/hide
Query:  THKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL
        THKDFNES VAAFVCDLTAD++ NHI PSSI         + VSPEKMS V  N+
Subjt:  THKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL

A0A1S3BVC5 uncharacterized protein LOC1034936732.2e-0585.71Show/hide
Query:  ISSSKDTE-CALILCHVLRRVDEPTIVSAAKRFGF
        ISSSKD+E  ALILCHVLRRVDEPTIVS A RFGF
Subjt:  ISSSKDTE-CALILCHVLRRVDEPTIVSAAKRFGF

A0A1S3BVC5 uncharacterized protein LOC1034936731.8e-0785.29Show/hide
Query:  ISSSKDTECALILCHVLRRVDEPTIVSAAKRFGF
        IS SKD+ECALILCHVLRRVDEPTI+SAA++FGF
Subjt:  ISSSKDTECALILCHVLRRVDEPTIVSAAKRFGF

A0A6J1CML6 uncharacterized protein LOC111012843 isoform X22.4e-0477.78Show/hide
Query:  ISSSK--DTECALILCHVLRRVDEPTIVSAAKRFGF
        I+SSK  D+E ALILCHVLRRVDEPTIVS+A +FGF
Subjt:  ISSSK--DTECALILCHVLRRVDEPTIVSAAKRFGF

A0A6J1CML6 uncharacterized protein LOC111012843 isoform X21.4e-0762.5Show/hide
Query:  RTHKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL
        +THKDFNES VAAFVCDLTAD++ NHI PSSI         + VSPEKMS V  N+
Subjt:  RTHKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL

A0A6J1CNC3 uncharacterized protein LOC111012843 isoform X14.2e-0964.29Show/hide
Query:  RTHKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL
        +THKDFNES +AAFVCDLTADNL NH+ PSSI         + VSPEKMSQV  N+
Subjt:  RTHKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL

A0A6J1CNC3 uncharacterized protein LOC111012843 isoform X12.4e-0477.78Show/hide
Query:  ISSSK--DTECALILCHVLRRVDEPTIVSAAKRFGF
        I+SSK  D+E ALILCHVLRRVDEPTIVS+A +FGF
Subjt:  ISSSK--DTECALILCHVLRRVDEPTIVSAAKRFGF

A0A6J1CNC3 uncharacterized protein LOC111012843 isoform X14.2e-0964.29Show/hide
Query:  RTHKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL
        +THKDFNES +AAFVCDLTADNL NH+ PSSI         + VSPEKMSQV  N+
Subjt:  RTHKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL

A0A6J1IH79 uncharacterized protein LOC111477194 isoform X12.0e-0657.14Show/hide
Query:  RTHKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL
        + HKDFN+  VAAFVCDLTAD+L NHI PSS+         + VSPEKMS V  N+
Subjt:  RTHKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G26200.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein1.9e-0644.64Show/hide
Query:  RTHKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL
        + H ++ E+ V AF CDLT D L  HI PSS+         + VSPEKMS V  N+
Subjt:  RTHKDFNESHVAAFVCDLTADNLRNHIYPSSIR-------SNDVSPEKMSQVWHNL

AT2G26200.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein2.8e-0576Show/hide
Query:  ALILCHVLRRVDEPTIVSAAKRFGF
        ALILCHV RRVDEP+++SAA +FGF
Subjt:  ALILCHVLRRVDEPTIVSAAKRFGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATACTCAATCGATGCTCAAATTGTTATAATTGGAAAGCATCAACACAGAACGCATAAAGACTTCAATGAGAGCCATGTTGCTGCCTTTGTTTGTGATCTTACTGC
TGATAACTTGAGAAACCACATTTATCCATCATCGATTCGTAGTAATGATGTTTCCCCAGAGAAGATGTCCCAGGTGTGGCATAATCTAGCACTCATTGAGTTCCTACGTT
TTTCACAGATCTCGTCTAGTAAGGATACAGAATGTGCATTGATTCTTTGCCACGTCCTGCGTCGAGTCGATGAGCCAACGATCGTTTCAGCTGCTAAACGATTCGGTTTT
GTCCCAAATCATTGTGAGTTCTTGGTTCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATACTCAATCGATGCTCAAATTGTTATAATTGGAAAGCATCAACACAGAACGCATAAAGACTTCAATGAGAGCCATGTTGCTGCCTTTGTTTGTGATCTTACTGC
TGATAACTTGAGAAACCACATTTATCCATCATCGATTCGTAGTAATGATGTTTCCCCAGAGAAGATGTCCCAGGTGTGGCATAATCTAGCACTCATTGAGTTCCTACGTT
TTTCACAGATCTCGTCTAGTAAGGATACAGAATGTGCATTGATTCTTTGCCACGTCCTGCGTCGAGTCGATGAGCCAACGATCGTTTCAGCTGCTAAACGATTCGGTTTT
GTCCCAAATCATTGTGAGTTCTTGGTTCACTGA
Protein sequenceShow/hide protein sequence
MEYSIDAQIVIIGKHQHRTHKDFNESHVAAFVCDLTADNLRNHIYPSSIRSNDVSPEKMSQVWHNLALIEFLRFSQISSSKDTECALILCHVLRRVDEPTIVSAAKRFGF
VPNHCEFLVH