; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G017970 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G017970
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description17.1 kDa class II heat shock protein-like
Genome locationCmo_Chr01:13240619..13241032
RNA-Seq ExpressionCmoCh01G017970
SyntenyCmoCh01G017970
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0009408 - response to heat (biological process)
GO:0009651 - response to salt stress (biological process)
GO:0042542 - response to hydrogen peroxide (biological process)
GO:0051259 - protein complex oligomerization (biological process)
GO:0043621 - protein self-association (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR031107 - Small heat shock protein HSP20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADU55791.1 HSP17.4 [Citrullus lanatus]5.2e-6696.35Show/hide
Query:  MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA
        MDL DEADKSF+APTRTYVRDAKAMAATPAD+KEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA
Subjt:  MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA

Query:  NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN
        N DAISAVCQDGVLTVTVQKLPPPEPKKPK+VEVKVN
Subjt:  NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN

XP_022936723.1 17.3 kDa class II heat shock protein-like [Cucurbita moschata]8.3e-6491.97Show/hide
Query:  MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA
        MD  D+ADKSF+APTRTYVRDAKAMAATPAD+KEYPNSYVFVVDMPGLKVGDIKVQVE+DNVLL+SGERKREEEKEGAKYVRMERRVGK MRKFVLPENA
Subjt:  MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA

Query:  NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN
        N DAI+AVCQDGVLTVTVQKLPPPEPKKPK+VEVKVN
Subjt:  NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN

XP_022941229.1 17.1 kDa class II heat shock protein-like [Cucurbita moschata]9.4e-68100Show/hide
Query:  MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA
        MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA
Subjt:  MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA

Query:  NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN
        NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN
Subjt:  NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN

XP_022982420.1 17.1 kDa class II heat shock protein-like [Cucurbita maxima]4.7e-6798.54Show/hide
Query:  MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA
        MDLVDEADKSFNAPTRTYVRDA AMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA
Subjt:  MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA

Query:  NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN
        N+DAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN
Subjt:  NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN

XP_038898182.1 17.9 kDa class II heat shock protein-like [Benincasa hispida]9.8e-6594.89Show/hide
Query:  MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA
        MDL DEADKSF+APTRTYVRDAKAMAATPAD+KEY NSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLP+NA
Subjt:  MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA

Query:  NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN
        N DAISAVCQDGVLTVTVQKLPPPEPKKPK+VEVKVN
Subjt:  NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN

TrEMBL top hitse value%identityAlignment
A0A6J1FE17 17.3 kDa class II heat shock protein-like4.0e-6491.97Show/hide
Query:  MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA
        MD  D+ADKSF+APTRTYVRDAKAMAATPAD+KEYPNSYVFVVDMPGLKVGDIKVQVE+DNVLL+SGERKREEEKEGAKYVRMERRVGK MRKFVLPENA
Subjt:  MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA

Query:  NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN
        N DAI+AVCQDGVLTVTVQKLPPPEPKKPK+VEVKVN
Subjt:  NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN

A0A6J1FMP1 17.1 kDa class II heat shock protein-like4.6e-68100Show/hide
Query:  MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA
        MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA
Subjt:  MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA

Query:  NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN
        NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN
Subjt:  NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN

A0A6J1ILE9 17.3 kDa class II heat shock protein-like4.0e-6491.97Show/hide
Query:  MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA
        MD  D+ADKSF+APTRTYVRDAKAMAATPAD+KEYPNSYVFVVDMPGLKVGDIKVQVE+DNVLL+SGERKREEEKEGAKYVRMERRVGK MRKFVLPENA
Subjt:  MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA

Query:  NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN
        N DAI+AVCQDGVLTVTVQKLPPPEPKKPK+VEVKVN
Subjt:  NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN

A0A6J1J2L5 17.1 kDa class II heat shock protein-like2.3e-6798.54Show/hide
Query:  MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA
        MDLVDEADKSFNAPTRTYVRDA AMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA
Subjt:  MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA

Query:  NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN
        N+DAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN
Subjt:  NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN

H6TB44 HSP17.42.5e-6696.35Show/hide
Query:  MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA
        MDL DEADKSF+APTRTYVRDAKAMAATPAD+KEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA
Subjt:  MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENA

Query:  NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN
        N DAISAVCQDGVLTVTVQKLPPPEPKKPK+VEVKVN
Subjt:  NVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN

SwissProt top hitse value%identityAlignment
O82013 17.3 kDa class II heat shock protein2.4e-5887.6Show/hide
Query:  DKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISA
        + S NAP++ YVRDAKAMAATPAD+KEYPNSYVFVVDMPGLK GDIKVQVE+DNVLLISGERKREEEKEGAK++RMERRVGK MRKF LPENAN DAISA
Subjt:  DKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISA

Query:  VCQDGVLTVTVQKLPPPEPKKPKVVEVKV
        VCQDGVLTVTVQKLPPPEPKKPK +EVKV
Subjt:  VCQDGVLTVTVQKLPPPEPKKPKVVEVKV

P05477 17.9 kDa class II heat shock protein2.0e-5780.58Show/hide
Query:  MDLVDEA---DKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLP
        MD+ ++    +K+ NAPT +YVRDAKAMAATPAD+KEYPNSYVF +DMPGLK GDIKVQVEDDN+LLI GERKR+EEKEGAKY+RMERRVGKLMRKFVLP
Subjt:  MDLVDEA---DKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLP

Query:  ENANVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKV
        ENAN DAISAVCQDGVL+VTVQKLPPPEPKKP+ ++VKV
Subjt:  ENANVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKV

P19242 17.1 kDa class II heat shock protein1.9e-5881.75Show/hide
Query:  MDLVDE-ADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPEN
        MDL D+  +K+ NAPTRTYVRDAKAMAATPAD+KE+PNSYVF+VDMPG+K GDIKVQVED+NVLLISGERKREEEKEG KY++MERR+GKLMRKFVLPEN
Subjt:  MDLVDE-ADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPEN

Query:  ANVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKV
        AN++AISA+ QDGVLTVTV KLPPPEPKKPK ++VKV
Subjt:  ANVDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKV

P46516 17.9 kDa class II heat shock protein2.9e-5177.69Show/hide
Query:  DKSFNA-PTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAIS
        +KS N+ P+R YVRDA+AMAATPAD+KE PNSYVF+VDMPGLK GDIKVQVE DNVL+ISG+R REEEKEG KYVRMERR+GK M+KF LPE+AN D IS
Subjt:  DKSFNA-PTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAIS

Query:  AVCQDGVLTVTVQKLPPPEPKKPKVVEVKV
        A+CQDGVLTVTV+KLPPPEPKKPK ++V+V
Subjt:  AVCQDGVLTVTVQKLPPPEPKKPKVVEVKV

Q01544 17.2 kDa class II heat shock protein8.9e-5377.44Show/hide
Query:  DEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKRE-EEKEGAKYVRMERRVGKLMRKFVLPENANVD
        D+   + +AP+RT++ DAKAMAATPAD+KEYPNSYVF++DMPGLK GDIKVQV+ DNVL ISGERKRE EEKEGAKYVRMERRVGKLMRKFVLPENAN +
Subjt:  DEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKRE-EEKEGAKYVRMERRVGKLMRKFVLPENANVD

Query:  AISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKV
         I+AVCQDGVLTVTV+ +PPPEPKKP+ +EVK+
Subjt:  AISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKV

Arabidopsis top hitse value%identityAlignment
AT1G54050.1 HSP20-like chaperones superfamily protein6.4e-2247.37Show/hide
Query:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLI--SGERKR--EEEKEGAKYVRMERRVGK-LMRKFVLPENANVDAISAVCQDGVLTVTVQKLPP
        P DI E P  Y+F +D+PG+   DI+V VE++  L+I  +G+RKR  +E +EG+KY+R+ERR+ + L++KF LPE+A++ +++A  Q+GVLTV ++KL P
Subjt:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLI--SGERKR--EEEKEGAKYVRMERRVGK-LMRKFVLPENANVDAISAVCQDGVLTVTVQKLPP

Query:  PEPKKPKVVEVKVN
        P+P KPK V++ V+
Subjt:  PEPKKPKVVEVKVN

AT4G10250.1 HSP20-like chaperones superfamily protein5.4e-2142.34Show/hide
Query:  AMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQKLPP
        A++    D KE    +  ++D+PGLK  ++K++VE++ VL +SGERKREEEK+G ++ R+ER  GK  R+F LP+N +++++ A  ++GVLT+ + KL P
Subjt:  AMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQKLPP

Query:  PEPKKPKVVEV
         + K P+VV +
Subjt:  PEPKKPKVVEV

AT5G12020.1 17.6 kDa class II heat shock protein3.0e-4872.31Show/hide
Query:  DKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKRE-EEKEGAKYVRMERRVGKLMRKFVLPENANVDAIS
        +K+ N P+R Y+RDAKAMAATPAD+ E+PN+Y FVVDMPG+K  +IKVQVE+DNVL++SGER+RE +E EG KYVRMERR+GK MRKF LPENA++D IS
Subjt:  DKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKRE-EEKEGAKYVRMERRVGKLMRKFVLPENANVDAIS

Query:  AVCQDGVLTVTVQKLPPPEPKKPKVVEVKV
        AVC DGVL VTVQKLPPPEPKKPK ++V+V
Subjt:  AVCQDGVLTVTVQKLPPPEPKKPKVVEVKV

AT5G12030.1 heat shock protein 17.6A1.0e-4361.65Show/hide
Query:  DEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKRE-EEKEGAKYVRMERRVGKLMRKFVLPENANVD
        ++ +K+ N P+R Y+RDAKAMAATPAD+ E+P++YVF VDMPG+K  +I+VQ+E++NVL++SG+R+R+ +E EG K+VRMERR+GK MRKF LP+NA+++
Subjt:  DEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKRE-EEKEGAKYVRMERRVGKLMRKFVLPENANVD

Query:  AISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKV
         ISA C DGVL VT+ KLPPPEPKKPK ++V+V
Subjt:  AISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKV

AT5G59720.1 heat shock protein 18.29.9e-2347.46Show/hide
Query:  RDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQ
        RD  A      D KE P ++VF  D+PGLK  ++KV+VED NVL ISGER +E E++  K+ R+ER  GK MR+F LPENA ++ + A  ++GVLTV V 
Subjt:  RDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQDGVLTVTVQ

Query:  KLPPPEPKKPKVVEVKVN
        K P    KKP+V  + ++
Subjt:  KLPPPEPKKPKVVEVKVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTCGTCGACGAGGCTGACAAGTCGTTCAACGCCCCAACACGAACCTACGTCCGGGATGCCAAGGCCATGGCAGCCACTCCGGCCGACATCAAGGAGTATCCAAA
TTCCTACGTTTTCGTCGTCGACATGCCAGGGCTGAAGGTCGGAGACATCAAGGTTCAGGTTGAGGACGACAATGTGCTACTGATAAGTGGCGAGAGGAAGAGGGAGGAGG
AGAAAGAAGGGGCGAAGTATGTGAGGATGGAGAGGAGAGTTGGGAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCCAACGTTGATGCCATCTCGGCGGTTTGTCAG
GATGGTGTGCTCACGGTGACCGTGCAAAAGTTGCCACCACCTGAGCCCAAGAAGCCCAAGGTGGTTGAGGTCAAGGTCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCTCGTCGACGAGGCTGACAAGTCGTTCAACGCCCCAACACGAACCTACGTCCGGGATGCCAAGGCCATGGCAGCCACTCCGGCCGACATCAAGGAGTATCCAAA
TTCCTACGTTTTCGTCGTCGACATGCCAGGGCTGAAGGTCGGAGACATCAAGGTTCAGGTTGAGGACGACAATGTGCTACTGATAAGTGGCGAGAGGAAGAGGGAGGAGG
AGAAAGAAGGGGCGAAGTATGTGAGGATGGAGAGGAGAGTTGGGAAGTTAATGAGGAAATTTGTGTTGCCGGAAAATGCCAACGTTGATGCCATCTCGGCGGTTTGTCAG
GATGGTGTGCTCACGGTGACCGTGCAAAAGTTGCCACCACCTGAGCCCAAGAAGCCCAAGGTGGTTGAGGTCAAGGTCAATTGA
Protein sequenceShow/hide protein sequence
MDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENANVDAISAVCQ
DGVLTVTVQKLPPPEPKKPKVVEVKVN